RNA–Protein interactions for RNA: ENST00000544725.5

COPS7A-220, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 5

Gene COPS7A, Length 502 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-220ENST00000544725 CDYL2Q8N8U2 506 aa12.93□□□□□ -0.34
COPS7A-220ENST00000544725 ACTRT2Q8TDY3 377 aa12.93□□□□□ -0.34
COPS7A-220ENST00000544725 C10orf105Q8TEF2 133 aa12.93□□□□□ -0.34
COPS7A-220ENST00000544725 C16orf78Q8WTQ4 265 aa12.93□□□□□ -0.34
COPS7A-220ENST00000544725 NPAS1Q99742 590 aa12.93□□□□□ -0.34
COPS7A-220ENST00000544725 DHRS9Q9BPW9 319 aa12.93□□□□□ -0.34
COPS7A-220ENST00000544725 LMF2Q9BU23 707 aaKnown RBP12.93□□□□□ -0.34
COPS7A-220ENST00000544725 VPS11Q9H270 941 aa12.93□□□□□ -0.34
COPS7A-220ENST00000544725 DPH5Q9H2P9 285 aa12.93□□□□□ -0.34
COPS7A-220ENST00000544725 DMGDHQ9UI17 866 aaKnown RBP12.93□□□□□ -0.34
COPS7A-220ENST00000544725 POU2F3Q9UKI9 436 aa12.93□□□□□ -0.34
COPS7A-220ENST00000544725 TTC36A6NLP5 189 aa12.92□□□□□ -0.34
COPS7A-220ENST00000544725 ALG1L2C9J202 215 aa12.92□□□□□ -0.34
COPS7A-220ENST00000544725 H7C417 338 aa12.92□□□□□ -0.34
COPS7A-220ENST00000544725 UPK1AO00322 258 aa12.92□□□□□ -0.34
COPS7A-220ENST00000544725 LYZL6O75951 148 aa12.92□□□□□ -0.34
COPS7A-220ENST00000544725 PRKD3O94806 890 aa12.92□□□□□ -0.34
COPS7A-220ENST00000544725 PSMG1O95456 288 aa12.92□□□□□ -0.34
COPS7A-220ENST00000544725 KRT6AP02538 564 aa12.92□□□□□ -0.34
COPS7A-220ENST00000544725 KRT6BP04259 564 aa12.92□□□□□ -0.34
COPS7A-220ENST00000544725 JUNP05412 331 aaKnown RBP12.92□□□□□ -0.34
COPS7A-220ENST00000544725 YES1P07947 543 aa12.92□□□□□ -0.34
COPS7A-220ENST00000544725 RPS17P08708 135 aaKnown RBP12.92□□□□□ -0.34
COPS7A-220ENST00000544725 GABRA3P34903 492 aa12.92□□□□□ -0.34
COPS7A-220ENST00000544725 GSTM5P46439 218 aa12.92□□□□□ -0.34
COPS7A-220ENST00000544725 KRT6CP48668 564 aa12.92□□□□□ -0.34
COPS7A-220ENST00000544725 RAE1P78406 368 aaKnown RBP12.92□□□□□ -0.34
COPS7A-220ENST00000544725 SPIN4Q56A73 249 aa12.92□□□□□ -0.34
COPS7A-220ENST00000544725 TCHHL1Q5QJ38 904 aaPredicted RBP12.92□□□□□ -0.34
COPS7A-220ENST00000544725 TIMM23BQ5SRD1 257 aa12.92□□□□□ -0.34
COPS7A-220ENST00000544725 Q6ZSR9 355 aa12.92□□□□□ -0.34
COPS7A-220ENST00000544725 Q6ZT83 130 aa12.92□□□□□ -0.34
COPS7A-220ENST00000544725 RPS27LQ71UM5 84 aaKnown RBP12.92□□□□□ -0.34
COPS7A-220ENST00000544725 FCRLAQ7L513 359 aa12.92□□□□□ -0.34
COPS7A-220ENST00000544725 P2RY8Q86VZ1 359 aa12.92□□□□□ -0.34
COPS7A-220ENST00000544725 PIAS4Q8N2W9 510 aaPredicted RBP12.92□□□□□ -0.34
COPS7A-220ENST00000544725 OR2L13Q8N349 312 aa12.92□□□□□ -0.34
COPS7A-220ENST00000544725 MUC15Q8N387 334 aa12.92□□□□□ -0.34
COPS7A-220ENST00000544725 ZNF483Q8TF39 744 aaPredicted RBP12.92□□□□□ -0.34
COPS7A-220ENST00000544725 HTRA1Q92743 480 aa12.92□□□□□ -0.34
COPS7A-220ENST00000544725 MRRFQ96E11 262 aaKnown RBP12.92□□□□□ -0.34
COPS7A-220ENST00000544725 ERP44Q9BS26 406 aa12.92□□□□□ -0.34
COPS7A-220ENST00000544725 PLCE1Q9P212 2302 aa12.92□□□□□ -0.34
COPS7A-220ENST00000544725 MGAT4BQ9UQ53 548 aa12.92□□□□□ -0.34
COPS7A-220ENST00000544725 YLPM1P49750 1951 aaKnown RBP12.91□□□□□ -0.34
COPS7A-220ENST00000544725 GOLGA8QA0A0J9YX86 632 aa12.91□□□□□ -0.34
COPS7A-220ENST00000544725 LOC100289279A0A1B0GTE1 492 aa12.91□□□□□ -0.34
COPS7A-220ENST00000544725 HMX2A2RU54 273 aa12.91□□□□□ -0.34
COPS7A-220ENST00000544725 GOLGA8OA6NCC3 632 aa12.91□□□□□ -0.34
COPS7A-220ENST00000544725 ZNF814B7Z6K7 855 aa12.91□□□□□ -0.34
COPS7A-220ENST00000544725 E7EQL1 145 aa12.91□□□□□ -0.34
COPS7A-220ENST00000544725 GOLGA8NF8WBI6 632 aa12.91□□□□□ -0.34
COPS7A-220ENST00000544725 GOLGA8RI6L899 631 aa12.91□□□□□ -0.34
COPS7A-220ENST00000544725 MANBAO00462 879 aa12.91□□□□□ -0.34
COPS7A-220ENST00000544725 PPP6CO00743 305 aa12.91□□□□□ -0.34
COPS7A-220ENST00000544725 SPRY1O43609 319 aaPredicted RBP12.91□□□□□ -0.34
COPS7A-220ENST00000544725 IGKV1D-16P01601 117 aa12.91□□□□□ -0.34
COPS7A-220ENST00000544725 NGFRP08138 427 aa12.91□□□□□ -0.34
COPS7A-220ENST00000544725 BMP4P12644 408 aa12.91□□□□□ -0.34
COPS7A-220ENST00000544725 DDCP20711 480 aa12.91□□□□□ -0.34
COPS7A-220ENST00000544725 TIA1P31483 386 aaKnown RBP eCLIP12.91□□□□□ -0.34
COPS7A-220ENST00000544725 SFTPDP35247 375 aa12.91□□□□□ -0.34
COPS7A-220ENST00000544725 EIF1P41567 113 aaKnown RBP12.91□□□□□ -0.34
COPS7A-220ENST00000544725 PAFAH1B1P43034 410 aa12.91□□□□□ -0.34
COPS7A-220ENST00000544725 MAGEA4P43358 317 aa12.91□□□□□ -0.34
COPS7A-220ENST00000544725 CDH13P55290 713 aa12.91□□□□□ -0.34
COPS7A-220ENST00000544725 SLC18A2Q05940 514 aa12.91□□□□□ -0.34
COPS7A-220ENST00000544725 ACSM2AQ08AH3 577 aa12.91□□□□□ -0.34
COPS7A-220ENST00000544725 ACSM2BQ68CK6 577 aa12.91□□□□□ -0.34
COPS7A-220ENST00000544725 TMEM108Q6UXF1 575 aa12.91□□□□□ -0.34
COPS7A-220ENST00000544725 PLD6Q8N2A8 252 aaKnown RBP12.91□□□□□ -0.34
COPS7A-220ENST00000544725 SLC43A2Q8N370 569 aa12.91□□□□□ -0.34
COPS7A-220ENST00000544725 OR2W6PQ8NHA6 318 aa12.91□□□□□ -0.34
COPS7A-220ENST00000544725 SRXN1Q9BYN0 137 aa12.91□□□□□ -0.34
COPS7A-220ENST00000544725 PLA2G12AQ9BZM1 189 aa12.91□□□□□ -0.34
COPS7A-220ENST00000544725 GRID1Q9ULK0 1009 aa12.91□□□□□ -0.34
COPS7A-220ENST00000544725 TENM1Q9UKZ4 2725 aa12.91□□□□□ -0.34
COPS7A-220ENST00000544725 MALRD1Q5VYJ5 2156 aa12.9□□□□□ -0.34
COPS7A-220ENST00000544725 GXYLT2A0PJZ3 443 aa12.9□□□□□ -0.34
COPS7A-220ENST00000544725 SLC35F4A4IF30 521 aa12.9□□□□□ -0.34
COPS7A-220ENST00000544725 FAM187AA6NFU0 413 aa12.9□□□□□ -0.34
COPS7A-220ENST00000544725 GJE1A6NN92 205 aa12.9□□□□□ -0.34
COPS7A-220ENST00000544725 ZSCAN12O43309 604 aa12.9□□□□□ -0.34
COPS7A-220ENST00000544725 ULK1O75385 1050 aa12.9□□□□□ -0.34
COPS7A-220ENST00000544725 OR4F21O95013 312 aa12.9□□□□□ -0.34
COPS7A-220ENST00000544725 OXSR1O95747 527 aaPredicted RBP12.9□□□□□ -0.34
COPS7A-220ENST00000544725 CHN1P15882 459 aa12.9□□□□□ -0.34
COPS7A-220ENST00000544725 TSPAN8P19075 237 aa12.9□□□□□ -0.34
COPS7A-220ENST00000544725 GGT1P19440 569 aa12.9□□□□□ -0.34
COPS7A-220ENST00000544725 ELK4P28324 431 aa12.9□□□□□ -0.34
COPS7A-220ENST00000544725 NTSP30990 170 aa12.9□□□□□ -0.34
COPS7A-220ENST00000544725 OR3A2P47893 321 aa12.9□□□□□ -0.34
COPS7A-220ENST00000544725 FABP6P51161 128 aa12.9□□□□□ -0.34
COPS7A-220ENST00000544725 EFNA4P52798 201 aa12.9□□□□□ -0.34
COPS7A-220ENST00000544725 MANFP55145 182 aaKnown RBP12.9□□□□□ -0.34
COPS7A-220ENST00000544725 MRPS25P82663 173 aaKnown RBP12.9□□□□□ -0.34
COPS7A-220ENST00000544725 SLC29A2Q14542 456 aa12.9□□□□□ -0.34
COPS7A-220ENST00000544725 UAP1Q16222 522 aaPredicted RBP12.9□□□□□ -0.34
COPS7A-220ENST00000544725 GLE1Q53GS7 698 aaKnown RBP12.9□□□□□ -0.34
COPS7A-220ENST00000544725 UBAP2Q5T6F2 1119 aaKnown RBP12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms