RNA–Protein interactions for RNA: ENST00000544550.5

SNHG1-220, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 636 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-220ENST00000544550 HIST1H1TP22492 207 aaPredicted RBP3.61□□□□□ -1.83
SNHG1-220ENST00000544550 ABCD3P28288 659 aa3.61□□□□□ -1.83
SNHG1-220ENST00000544550 NMBRP28336 390 aa3.61□□□□□ -1.83
SNHG1-220ENST00000544550 SLC7A1P30825 629 aa3.61□□□□□ -1.83
SNHG1-220ENST00000544550 CTNNA1P35221 906 aaKnown RBP3.61□□□□□ -1.83
SNHG1-220ENST00000544550 PIK3CBP42338 1070 aa3.61□□□□□ -1.83
SNHG1-220ENST00000544550 MARCKSL1P49006 195 aa3.61□□□□□ -1.83
SNHG1-220ENST00000544550 FABP6P51161 128 aa3.61□□□□□ -1.83
SNHG1-220ENST00000544550 CHN2P52757 468 aa3.61□□□□□ -1.83
SNHG1-220ENST00000544550 ARFIP2P53365 341 aa3.61□□□□□ -1.83
SNHG1-220ENST00000544550 DVL1P1P54792 670 aaPredicted RBP3.61□□□□□ -1.83
SNHG1-220ENST00000544550 DSCR4P56555 118 aaPredicted RBP3.61□□□□□ -1.83
SNHG1-220ENST00000544550 C21orf58P58505 322 aa3.61□□□□□ -1.83
SNHG1-220ENST00000544550 ID2Q02363 134 aa3.61□□□□□ -1.83
SNHG1-220ENST00000544550 ZNF844Q08AG5 666 aa3.61□□□□□ -1.83
SNHG1-220ENST00000544550 THOC5Q13769 683 aaKnown RBP3.61□□□□□ -1.83
SNHG1-220ENST00000544550 DOC2AQ14183 400 aa3.61□□□□□ -1.83
SNHG1-220ENST00000544550 GANABQ14697 944 aaKnown RBP3.61□□□□□ -1.83
SNHG1-220ENST00000544550 TAB1Q15750 504 aa3.61□□□□□ -1.83
SNHG1-220ENST00000544550 CTU2Q2VPK5 515 aaKnown RBP3.61□□□□□ -1.83
SNHG1-220ENST00000544550 ZNF470Q6ECI4 717 aa3.61□□□□□ -1.83
SNHG1-220ENST00000544550 ZNF544Q6NX49 715 aa3.61□□□□□ -1.83
SNHG1-220ENST00000544550 DRICH1Q6PGQ1 229 aaPredicted RBP3.61□□□□□ -1.83
SNHG1-220ENST00000544550 SHQ1Q6PI26 577 aaKnown RBP3.61□□□□□ -1.83
SNHG1-220ENST00000544550 RINLQ6ZS11 566 aa3.61□□□□□ -1.83
SNHG1-220ENST00000544550 RBM43Q6ZSC3 357 aaKnown RBP3.61□□□□□ -1.83
SNHG1-220ENST00000544550 CENPUQ71F23 418 aa3.61□□□□□ -1.83
SNHG1-220ENST00000544550 THOC6Q86W42 341 aaKnown RBP3.61□□□□□ -1.83
SNHG1-220ENST00000544550 CCDC25Q86WR0 208 aa3.61□□□□□ -1.83
SNHG1-220ENST00000544550 LMNTD2Q8IXW0 634 aa3.61□□□□□ -1.83
SNHG1-220ENST00000544550 METTL25Q8N6Q8 603 aa3.61□□□□□ -1.83
SNHG1-220ENST00000544550 WDSUB1Q8N9V3 476 aa3.61□□□□□ -1.83
SNHG1-220ENST00000544550 TRIM58Q8NG06 486 aa3.61□□□□□ -1.83
SNHG1-220ENST00000544550 OR7G1Q8NGA0 311 aa3.61□□□□□ -1.83
SNHG1-220ENST00000544550 ZFP28Q8NHY6 868 aa3.61□□□□□ -1.83
SNHG1-220ENST00000544550 FNDC9Q8TBE3 224 aa3.61□□□□□ -1.83
SNHG1-220ENST00000544550 ST8SIA2Q92186 375 aa3.61□□□□□ -1.83
SNHG1-220ENST00000544550 TFAP2CQ92754 450 aa3.61□□□□□ -1.83
SNHG1-220ENST00000544550 NEUROG1Q92886 237 aa3.61□□□□□ -1.83
SNHG1-220ENST00000544550 PPWD1Q96BP3 646 aaKnown RBP3.61□□□□□ -1.83
SNHG1-220ENST00000544550 C3orf49Q96BT1 292 aa3.61□□□□□ -1.83
SNHG1-220ENST00000544550 CCDC42Q96M95 316 aa3.61□□□□□ -1.83
SNHG1-220ENST00000544550 NAP1L5Q96NT1 182 aaPredicted RBP3.61□□□□□ -1.83
SNHG1-220ENST00000544550 BTBD9Q96Q07 612 aa3.61□□□□□ -1.83
SNHG1-220ENST00000544550 BPIFA3Q9BQP9 254 aa3.61□□□□□ -1.83
SNHG1-220ENST00000544550 CPPED1Q9BRF8 314 aaPredicted RBP3.61□□□□□ -1.83
SNHG1-220ENST00000544550 KIFC1Q9BW19 673 aa3.61□□□□□ -1.83
SNHG1-220ENST00000544550 SUCNR1Q9BXA5 334 aa3.61□□□□□ -1.83
SNHG1-220ENST00000544550 TSGA10Q9BZW7 698 aa3.61□□□□□ -1.83
SNHG1-220ENST00000544550 AICDAQ9GZX7 198 aa3.61□□□□□ -1.83
SNHG1-220ENST00000544550 RPF2Q9H7B2 306 aaKnown RBP3.61□□□□□ -1.83
SNHG1-220ENST00000544550 GALNT9Q9HCQ5 603 aa3.61□□□□□ -1.83
SNHG1-220ENST00000544550 RLIMQ9NVW2 624 aa3.61□□□□□ -1.83
SNHG1-220ENST00000544550 FBXO34Q9NWN3 711 aa3.61□□□□□ -1.83
SNHG1-220ENST00000544550 PAK5Q9P286 719 aa3.61□□□□□ -1.83
SNHG1-220ENST00000544550 XPR1Q9UBH6 696 aa3.61□□□□□ -1.83
SNHG1-220ENST00000544550 PHF11Q9UIL8 331 aa3.61□□□□□ -1.83
SNHG1-220ENST00000544550 POU2F3Q9UKI9 436 aa3.61□□□□□ -1.83
SNHG1-220ENST00000544550 MCTS1Q9ULC4 181 aaKnown RBP3.61□□□□□ -1.83
SNHG1-220ENST00000544550 MED16Q9Y2X0 877 aa3.61□□□□□ -1.83
SNHG1-220ENST00000544550 PTGDR2Q9Y5Y4 395 aa3.61□□□□□ -1.83
SNHG1-220ENST00000544550 SVEP1Q4LDE5 3571 aa3.61□□□□□ -1.83
SNHG1-220ENST00000544550 CR1P17927 2039 aa3.6□□□□□ -1.83
SNHG1-220ENST00000544550 TLN2Q9Y4G6 2542 aa3.6□□□□□ -1.83
SNHG1-220ENST00000544550 IGHV4-61A0A0C4DH41 118 aa3.6□□□□□ -1.83
SNHG1-220ENST00000544550 GOLGA8QA0A0J9YX86 632 aa3.6□□□□□ -1.83
SNHG1-220ENST00000544550 CTAGE15A4D2H0 777 aa3.6□□□□□ -1.83
SNHG1-220ENST00000544550 GOLGA8OA6NCC3 632 aa3.6□□□□□ -1.83
SNHG1-220ENST00000544550 DPRXA6NFQ7 191 aa3.6□□□□□ -1.83
SNHG1-220ENST00000544550 SHISA9B4DS77 424 aa3.6□□□□□ -1.83
SNHG1-220ENST00000544550 GOLGA8NF8WBI6 632 aa3.6□□□□□ -1.83
SNHG1-220ENST00000544550 GOLGA8RI6L899 631 aa3.6□□□□□ -1.83
SNHG1-220ENST00000544550 ABCD4O14678 606 aa3.6□□□□□ -1.83
SNHG1-220ENST00000544550 ACOX3O15254 700 aa3.6□□□□□ -1.83
SNHG1-220ENST00000544550 SEC14L5O43304 696 aa3.6□□□□□ -1.83
SNHG1-220ENST00000544550 MFAP3LO75121 409 aa3.6□□□□□ -1.83
SNHG1-220ENST00000544550 HAUS5O94927 633 aa3.6□□□□□ -1.83
SNHG1-220ENST00000544550 SCELO95171 688 aa3.6□□□□□ -1.83
SNHG1-220ENST00000544550 GPR75O95800 540 aa3.6□□□□□ -1.83
SNHG1-220ENST00000544550 GUCA1CO95843 209 aa3.6□□□□□ -1.83
SNHG1-220ENST00000544550 IFNB1P01574 187 aa3.6□□□□□ -1.83
SNHG1-220ENST00000544550 GYPCP04921 128 aa3.6□□□□□ -1.83
SNHG1-220ENST00000544550 TUBBP07437 444 aa3.6□□□□□ -1.83
SNHG1-220ENST00000544550 TPM1P09493 284 aa3.6□□□□□ -1.83
SNHG1-220ENST00000544550 PABPC4LP0CB38 370 aaKnown RBP3.6□□□□□ -1.83
SNHG1-220ENST00000544550 DHRS4L1P0CG22 281 aa3.6□□□□□ -1.83
SNHG1-220ENST00000544550 SLC35E2BP0CK96 405 aa3.6□□□□□ -1.83
SNHG1-220ENST00000544550 SLC35E2P0CK97 266 aa3.6□□□□□ -1.83
SNHG1-220ENST00000544550 HKR1P10072 659 aa3.6□□□□□ -1.83
SNHG1-220ENST00000544550 ATP5A1P25705 553 aaKnown RBP3.6□□□□□ -1.83
SNHG1-220ENST00000544550 MSX2P35548 267 aaPredicted RBP3.6□□□□□ -1.83
SNHG1-220ENST00000544550 PTGDSP41222 190 aa3.6□□□□□ -1.83
SNHG1-220ENST00000544550 GRIA1P42261 906 aa3.6□□□□□ -1.83
SNHG1-220ENST00000544550 SSR2P43308 183 aa3.6□□□□□ -1.83
SNHG1-220ENST00000544550 PRIM2P49643 509 aa3.6□□□□□ -1.83
SNHG1-220ENST00000544550 HNMTP50135 292 aa3.6□□□□□ -1.83
SNHG1-220ENST00000544550 SUMO3P55854 103 aaPredicted RBP3.6□□□□□ -1.83
SNHG1-220ENST00000544550 RAP2BP61225 183 aa3.6□□□□□ -1.83
SNHG1-220ENST00000544550 TPM4P67936 248 aa3.6□□□□□ -1.83
SNHG1-220ENST00000544550 PSPHP78330 225 aa3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms