RNA–Protein interactions for RNA: ENST00000543633.5

VPS33A-208, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS33A, Length 2,019 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-208ENST00000543633 SAMD8Q96LT4 415 aa12.79□□□□□ -0.36
VPS33A-208ENST00000543633 FERD3LQ96RJ6 166 aa12.79□□□□□ -0.36
VPS33A-208ENST00000543633 TIMM29Q9BSF4 260 aa12.79□□□□□ -0.36
VPS33A-208ENST00000543633 KLHL31Q9H511 634 aa12.79□□□□□ -0.36
VPS33A-208ENST00000543633 EVA1AQ9H8M9 152 aa12.79□□□□□ -0.36
VPS33A-208ENST00000543633 MRPS30Q9NP92 439 aaKnown RBP12.79□□□□□ -0.36
VPS33A-208ENST00000543633 PRDM9Q9NQV7 894 aa12.79□□□□□ -0.36
VPS33A-208ENST00000543633 SATB2Q9UPW6 733 aa12.79□□□□□ -0.36
VPS33A-208ENST00000543633 TMEM5Q9Y2B1 443 aa12.79□□□□□ -0.36
VPS33A-208ENST00000543633 ZNF780BQ9Y6R6 833 aa12.79□□□□□ -0.36
VPS33A-208ENST00000543633 A0A0A6YYJ9 748 aa12.78□□□□□ -0.36
VPS33A-208ENST00000543633 TEX51A0A1B0GUA7 166 aa12.78□□□□□ -0.36
VPS33A-208ENST00000543633 A0A1B0GVI7 797 aa12.78□□□□□ -0.36
VPS33A-208ENST00000543633 A0A1W2PQ72 361 aa12.78□□□□□ -0.36
VPS33A-208ENST00000543633 C4orf51C9J302 202 aa12.78□□□□□ -0.36
VPS33A-208ENST00000543633 KCNJ13O60928 360 aa12.78□□□□□ -0.36
VPS33A-208ENST00000543633 PRKRAO75569 313 aaKnown RBP12.78□□□□□ -0.36
VPS33A-208ENST00000543633 SC5DO75845 299 aa12.78□□□□□ -0.36
VPS33A-208ENST00000543633 PAHP00439 452 aa12.78□□□□□ -0.36
VPS33A-208ENST00000543633 P2RY2P41231 377 aa12.78□□□□□ -0.36
VPS33A-208ENST00000543633 STXBP1P61764 594 aaKnown RBP12.78□□□□□ -0.36
VPS33A-208ENST00000543633 NTRK2Q16620 822 aa12.78□□□□□ -0.36
VPS33A-208ENST00000543633 COL28A1Q2UY09 1125 aa12.78□□□□□ -0.36
VPS33A-208ENST00000543633 PUS10Q3MIT2 529 aaKnown RBP12.78□□□□□ -0.36
VPS33A-208ENST00000543633 PRPF38BQ5VTL8 546 aaKnown RBP12.78□□□□□ -0.36
VPS33A-208ENST00000543633 PSRC1Q6PGN9 363 aaPredicted RBP12.78□□□□□ -0.36
VPS33A-208ENST00000543633 ELMOD2Q8IZ81 293 aa12.78□□□□□ -0.36
VPS33A-208ENST00000543633 OR5W2Q8NH69 310 aa12.78□□□□□ -0.36
VPS33A-208ENST00000543633 FANK1Q8TC84 345 aa12.78□□□□□ -0.36
VPS33A-208ENST00000543633 SP7Q8TDD2 431 aaPredicted RBP12.78□□□□□ -0.36
VPS33A-208ENST00000543633 TMEM255BQ8WV15 326 aa12.78□□□□□ -0.36
VPS33A-208ENST00000543633 HERVK_113Q902F9 699 aa12.78□□□□□ -0.36
VPS33A-208ENST00000543633 C12orf66Q96MD2 445 aa12.78□□□□□ -0.36
VPS33A-208ENST00000543633 TIMP4Q99727 224 aa12.78□□□□□ -0.36
VPS33A-208ENST00000543633 DHRS9Q9BPW9 319 aa12.78□□□□□ -0.36
VPS33A-208ENST00000543633 TEX101Q9BY14 249 aa12.78□□□□□ -0.36
VPS33A-208ENST00000543633 OR52D1Q9H346 318 aa12.78□□□□□ -0.36
VPS33A-208ENST00000543633 CMC2Q9NRP2 79 aa12.78□□□□□ -0.36
VPS33A-208ENST00000543633 TEKT2Q9UIF3 430 aa12.78□□□□□ -0.36
VPS33A-208ENST00000543633 ZNF223Q9UK11 482 aaPredicted RBP12.78□□□□□ -0.36
VPS33A-208ENST00000543633 INSL6Q9Y581 213 aa12.78□□□□□ -0.36
VPS33A-208ENST00000543633 RANBP2P49792 3224 aaKnown RBP12.78□□□□□ -0.36
VPS33A-208ENST00000543633 CHD9Q3L8U1 2897 aa12.78□□□□□ -0.36
VPS33A-208ENST00000543633 A0A0G2JK05 382 aa12.78□□□□□ -0.36
VPS33A-208ENST00000543633 DAPL1A0PJW8 107 aa12.78□□□□□ -0.36
VPS33A-208ENST00000543633 TRAPPC13A5PLN9 417 aa12.78□□□□□ -0.36
VPS33A-208ENST00000543633 GLOD5A6NK44 160 aa12.78□□□□□ -0.36
VPS33A-208ENST00000543633 BHLHE40O14503 412 aa12.78□□□□□ -0.36
VPS33A-208ENST00000543633 FABP7O15540 132 aa12.78□□□□□ -0.36
VPS33A-208ENST00000543633 PRICKLE3O43900 615 aaPredicted RBP12.78□□□□□ -0.36
VPS33A-208ENST00000543633 PIP5K1CO60331 668 aa12.78□□□□□ -0.36
VPS33A-208ENST00000543633 ICMTO60725 284 aa12.78□□□□□ -0.36
VPS33A-208ENST00000543633 FMO6PO60774 539 aa12.78□□□□□ -0.36
VPS33A-208ENST00000543633 SOX30O94993 753 aa12.78□□□□□ -0.36
VPS33A-208ENST00000543633 RCBTB2O95199 551 aa12.78□□□□□ -0.36
VPS33A-208ENST00000543633 ZIC2O95409 532 aaPredicted RBP12.78□□□□□ -0.36
VPS33A-208ENST00000543633 TPOP07202 933 aa12.78□□□□□ -0.36
VPS33A-208ENST00000543633 PER3P56645 1201 aa12.78□□□□□ -0.36
VPS33A-208ENST00000543633 PITPNAQ00169 270 aa12.78□□□□□ -0.36
VPS33A-208ENST00000543633 DUSP8Q13202 625 aa12.78□□□□□ -0.36
VPS33A-208ENST00000543633 INSL4Q14641 139 aa12.78□□□□□ -0.36
VPS33A-208ENST00000543633 FCN2Q15485 313 aa12.78□□□□□ -0.36
VPS33A-208ENST00000543633 MLF2Q15773 248 aaPredicted RBP12.78□□□□□ -0.36
VPS33A-208ENST00000543633 ARHGAP11BQ3KRB8 267 aa12.78□□□□□ -0.36
VPS33A-208ENST00000543633 FAM205BPQ63HN1 556 aa12.78□□□□□ -0.36
VPS33A-208ENST00000543633 MFSD12Q6NUT3 480 aa12.78□□□□□ -0.36
VPS33A-208ENST00000543633 HDDC2Q7Z4H3 204 aa12.78□□□□□ -0.36
VPS33A-208ENST00000543633 LUZP2Q86TE4 346 aa12.78□□□□□ -0.36
VPS33A-208ENST00000543633 C11orf74Q86VG3 221 aa12.78□□□□□ -0.36
VPS33A-208ENST00000543633 MS4A15Q8N5U1 240 aa12.78□□□□□ -0.36
VPS33A-208ENST00000543633 SAMD12Q8N8I0 201 aa12.78□□□□□ -0.36
VPS33A-208ENST00000543633 MFSD9Q8NBP5 474 aa12.78□□□□□ -0.36
VPS33A-208ENST00000543633 ADAMTS14Q8WXS8 1223 aa12.78□□□□□ -0.36
VPS33A-208ENST00000543633 KLK6Q92876 244 aa12.78□□□□□ -0.36
VPS33A-208ENST00000543633 KISS1RQ969F8 398 aaPredicted RBP12.78□□□□□ -0.36
VPS33A-208ENST00000543633 RADILQ96JH8 1075 aa12.78□□□□□ -0.36
VPS33A-208ENST00000543633 HS6ST2Q96MM7 605 aa12.78□□□□□ -0.36
VPS33A-208ENST00000543633 ZSWIM3Q96MP5 696 aa12.78□□□□□ -0.36
VPS33A-208ENST00000543633 NRTNQ99748 197 aa12.78□□□□□ -0.36
VPS33A-208ENST00000543633 ISG20L2Q9H9L3 353 aaKnown RBP12.78□□□□□ -0.36
VPS33A-208ENST00000543633 SLC6A20Q9NP91 592 aa12.78□□□□□ -0.36
VPS33A-208ENST00000543633 SLC7A7Q9UM01 511 aa12.78□□□□□ -0.36
VPS33A-208ENST00000543633 BAIAP2Q9UQB8 552 aa12.78□□□□□ -0.36
VPS33A-208ENST00000543633 RASD1Q9Y272 281 aa12.78□□□□□ -0.36
VPS33A-208ENST00000543633 MYO10Q9HD67 2058 aa12.77□□□□□ -0.37
VPS33A-208ENST00000543633 TRAV1-2A0A0B4J238 106 aa12.77□□□□□ -0.37
VPS33A-208ENST00000543633 FAM86C2PA6NEL3 165 aa12.77□□□□□ -0.37
VPS33A-208ENST00000543633 LEUTXA8MZ59 168 aa12.77□□□□□ -0.37
VPS33A-208ENST00000543633 PRRT4C9JH25 899 aa12.77□□□□□ -0.37
VPS33A-208ENST00000543633 CDC42EP2O14613 210 aa12.77□□□□□ -0.37
VPS33A-208ENST00000543633 UBL3O95164 117 aa12.77□□□□□ -0.37
VPS33A-208ENST00000543633 SLC2A10O95528 541 aa12.77□□□□□ -0.37
VPS33A-208ENST00000543633 PCCBP05166 539 aa12.77□□□□□ -0.37
VPS33A-208ENST00000543633 POU2F2P09086 479 aa12.77□□□□□ -0.37
VPS33A-208ENST00000543633 ZGLP1P0C6A0 271 aa12.77□□□□□ -0.37
VPS33A-208ENST00000543633 RPS4Y1P22090 263 aaKnown RBP12.77□□□□□ -0.37
VPS33A-208ENST00000543633 MMP15P51511 669 aa12.77□□□□□ -0.37
VPS33A-208ENST00000543633 PDX1P52945 283 aa12.77□□□□□ -0.37
VPS33A-208ENST00000543633 SNRPD2P62316 118 aaKnown RBP12.77□□□□□ -0.37
VPS33A-208ENST00000543633 ACTC1P68032 377 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 75.9 ms