RNA–Protein interactions for RNA: ENST00000543324.1

CIT-213, Transcript of citron rho-interacting serine/threonine kinase, human

TSL 3

Gene CIT, Length 497 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CIT-213	ENST00000543324	CD40LG	P29965	261 aa		5.88	□□□□□ -1.47
CIT-213	ENST00000543324	PTGER1	P34995	402 aa		5.88	□□□□□ -1.47
CIT-213	ENST00000543324	MSX2	P35548	267 aa	Predicted RBP	5.88	□□□□□ -1.47
CIT-213	ENST00000543324	PIK3CB	P42338	1070 aa		5.88	□□□□□ -1.47
CIT-213	ENST00000543324	CYB561	P49447	251 aa		5.88	□□□□□ -1.47
CIT-213	ENST00000543324	PLA2G16	P53816	162 aa		5.88	□□□□□ -1.47
CIT-213	ENST00000543324	SLC12A2	P55011	1212 aa		5.88	□□□□□ -1.47
CIT-213	ENST00000543324	PHC1	P78364	1004 aa		5.88	□□□□□ -1.47
CIT-213	ENST00000543324	IRF9	Q00978	393 aa		5.88	□□□□□ -1.47
CIT-213	ENST00000543324	ALDH6A1	Q02252	535 aa	Known RBP	5.88	□□□□□ -1.47
CIT-213	ENST00000543324	FOXO1	Q12778	655 aa		5.88	□□□□□ -1.47
CIT-213	ENST00000543324	CHIT1	Q13231	466 aa		5.88	□□□□□ -1.47
CIT-213	ENST00000543324	SNTB1	Q13884	538 aa	Known RBP	5.88	□□□□□ -1.47
CIT-213	ENST00000543324	SELPLG	Q14242	412 aa		5.88	□□□□□ -1.47
CIT-213	ENST00000543324	FXN	Q16595	210 aa		5.88	□□□□□ -1.47
CIT-213	ENST00000543324	HYAL4	Q2M3T9	481 aa		5.88	□□□□□ -1.47
CIT-213	ENST00000543324	FLYWCH1	Q4VC44	716 aa		5.88	□□□□□ -1.47
CIT-213	ENST00000543324	CYBRD1	Q53TN4	286 aa		5.88	□□□□□ -1.47
CIT-213	ENST00000543324	XKR6	Q5GH73	641 aa		5.88	□□□□□ -1.47
CIT-213	ENST00000543324	ARL13A	Q5H913	290 aa	Predicted RBP	5.88	□□□□□ -1.47
CIT-213	ENST00000543324	TECRL	Q5HYJ1	363 aa		5.88	□□□□□ -1.47
CIT-213	ENST00000543324	TBCEL	Q5QJ74	424 aa		5.88	□□□□□ -1.47
CIT-213	ENST00000543324	KHDRBS2	Q5VWX1	349 aa	Known RBP	5.88	□□□□□ -1.47
CIT-213	ENST00000543324	LYPD8	Q6UX82	237 aa		5.88	□□□□□ -1.47
CIT-213	ENST00000543324	SLC16A12	Q6ZSM3	486 aa		5.88	□□□□□ -1.47
CIT-213	ENST00000543324	MDGA2	Q7Z553	956 aa		5.88	□□□□□ -1.47
CIT-213	ENST00000543324	PNPLA5	Q7Z6Z6	429 aa	Predicted RBP	5.88	□□□□□ -1.47
CIT-213	ENST00000543324	GPALPP1	Q8IXQ4	340 aa		5.88	□□□□□ -1.47
CIT-213	ENST00000543324	ADGRG5	Q8IZF4	528 aa		5.88	□□□□□ -1.47
CIT-213	ENST00000543324	GHDC	Q8N2G8	530 aa		5.88	□□□□□ -1.47
CIT-213	ENST00000543324	ZCCHC7	Q8N3Z6	543 aa	Known RBP	5.88	□□□□□ -1.47
CIT-213	ENST00000543324	MFSD4A	Q8N468	514 aa		5.88	□□□□□ -1.47
CIT-213	ENST00000543324	LIX1	Q8N485	282 aa		5.88	□□□□□ -1.47
CIT-213	ENST00000543324	CBR4	Q8N4T8	237 aa		5.88	□□□□□ -1.47
CIT-213	ENST00000543324	TMCO5A	Q8N6Q1	288 aa		5.88	□□□□□ -1.47
CIT-213	ENST00000543324	RNF148	Q8N7C7	305 aa		5.88	□□□□□ -1.47
CIT-213	ENST00000543324	ZNF321P	Q8N8H1	164 aa		5.88	□□□□□ -1.47
CIT-213	ENST00000543324	ACOT4	Q8N9L9	421 aa		5.88	□□□□□ -1.47
CIT-213	ENST00000543324	L3MBTL4	Q8NA19	623 aa		5.88	□□□□□ -1.47
CIT-213	ENST00000543324	MORN4	Q8NDC4	146 aa		5.88	□□□□□ -1.47
CIT-213	ENST00000543324	STAG3L4	Q8TBR4	150 aa		5.88	□□□□□ -1.47
CIT-213	ENST00000543324	WDR20	Q8TBZ3	569 aa		5.88	□□□□□ -1.47
CIT-213	ENST00000543324	ZNF721	Q8TF20	911 aa		5.88	□□□□□ -1.47
CIT-213	ENST00000543324	TSPEAR	Q8WU66	669 aa		5.88	□□□□□ -1.47
CIT-213	ENST00000543324	KCTD4	Q8WVF5	259 aa		5.88	□□□□□ -1.47
CIT-213	ENST00000543324	CANT1	Q8WVQ1	401 aa		5.88	□□□□□ -1.47
CIT-213	ENST00000543324	HPS1	Q92902	700 aa		5.88	□□□□□ -1.47
CIT-213	ENST00000543324	MUL1	Q969V5	352 aa		5.88	□□□□□ -1.47
CIT-213	ENST00000543324	NXNL1	Q96CM4	212 aa		5.88	□□□□□ -1.47
CIT-213	ENST00000543324	CCDC126	Q96EE4	140 aa		5.88	□□□□□ -1.47
CIT-213	ENST00000543324	PERP	Q96FX8	193 aa		5.88	□□□□□ -1.47
CIT-213	ENST00000543324	F2RL3	Q96RI0	385 aa		5.88	□□□□□ -1.47
CIT-213	ENST00000543324	RASL10B	Q96S79	203 aa		5.88	□□□□□ -1.47
CIT-213	ENST00000543324	MAPKAP1	Q9BPZ7	522 aa		5.88	□□□□□ -1.47
CIT-213	ENST00000543324	TBCD	Q9BTW9	1192 aa		5.88	□□□□□ -1.47
CIT-213	ENST00000543324	BEX2	Q9BXY8	128 aa		5.88	□□□□□ -1.47
CIT-213	ENST00000543324	NAA50	Q9GZZ1	169 aa	Known RBP	5.88	□□□□□ -1.47
CIT-213	ENST00000543324	PRTFDC1	Q9NRG1	225 aa		5.88	□□□□□ -1.47
CIT-213	ENST00000543324	NPAP1	Q9NZP6	1156 aa		5.88	□□□□□ -1.47
CIT-213	ENST00000543324	CD274	Q9NZQ7	290 aa		5.88	□□□□□ -1.47
CIT-213	ENST00000543324	MYOT	Q9UBF9	498 aa		5.88	□□□□□ -1.47
CIT-213	ENST00000543324	RNF112	Q9ULX5	631 aa		5.88	□□□□□ -1.47
CIT-213	ENST00000543324	MRPS33	Q9Y291	106 aa	Known RBP	5.88	□□□□□ -1.47
CIT-213	ENST00000543324	WBP11	Q9Y2W2	641 aa	Known RBP	5.88	□□□□□ -1.47
CIT-213	ENST00000543324	KLF13	Q9Y2Y9	288 aa	Predicted RBP	5.88	□□□□□ -1.47
CIT-213	ENST00000543324	NDUFAF1	Q9Y375	327 aa		5.88	□□□□□ -1.47
CIT-213	ENST00000543324	UGT2A1	Q9Y4X1	527 aa		5.88	□□□□□ -1.47
CIT-213	ENST00000543324	HRH3	Q9Y5N1	445 aa		5.88	□□□□□ -1.47
CIT-213	ENST00000543324		A0A0A6YYD5	115 aa		5.87	□□□□□ -1.47
CIT-213	ENST00000543324		A0A0G2JMM0	328 aa		5.87	□□□□□ -1.47
CIT-213	ENST00000543324		A0A1W2PPB8	328 aa		5.87	□□□□□ -1.47
CIT-213	ENST00000543324		A0A1W2PRS3	328 aa		5.87	□□□□□ -1.47
CIT-213	ENST00000543324	TCRBV5S2	A0A599	114 aa		5.87	□□□□□ -1.47
CIT-213	ENST00000543324	PINLYP	A6NC86	204 aa		5.87	□□□□□ -1.47
CIT-213	ENST00000543324	LRRC14B	A6NHZ5	514 aa		5.87	□□□□□ -1.47
CIT-213	ENST00000543324	KIR3DP1	A8MWS1	328 aa		5.87	□□□□□ -1.47
CIT-213	ENST00000543324	RTCA	O00442	366 aa	Known RBP	5.87	□□□□□ -1.47
CIT-213	ENST00000543324	NME4	O00746	187 aa		5.87	□□□□□ -1.47
CIT-213	ENST00000543324	TMPRSS2	O15393	492 aa		5.87	□□□□□ -1.47
CIT-213	ENST00000543324	SCO2	O43819	266 aa		5.87	□□□□□ -1.47
CIT-213	ENST00000543324	IDH3B	O43837	385 aa		5.87	□□□□□ -1.47
CIT-213	ENST00000543324	FGF17	O60258	216 aa		5.87	□□□□□ -1.47
CIT-213	ENST00000543324	MRPS14	O60783	128 aa	Known RBP	5.87	□□□□□ -1.47
CIT-213	ENST00000543324	OR2J2	O76002	312 aa		5.87	□□□□□ -1.47
CIT-213	ENST00000543324	PRSS23	O95084	383 aa		5.87	□□□□□ -1.47
CIT-213	ENST00000543324	ETHE1	O95571	254 aa		5.87	□□□□□ -1.47
CIT-213	ENST00000543324	MLYCD	O95822	493 aa		5.87	□□□□□ -1.47
CIT-213	ENST00000543324	IGHG3	P01860	377 aa		5.87	□□□□□ -1.47
CIT-213	ENST00000543324	CLPS	P04118	112 aa		5.87	□□□□□ -1.47
CIT-213	ENST00000543324	BSG	P35613	385 aa		5.87	□□□□□ -1.47
CIT-213	ENST00000543324	POLR2I	P36954	125 aa	Known RBP	5.87	□□□□□ -1.47
CIT-213	ENST00000543324	SOX3	P41225	446 aa		5.87	□□□□□ -1.47
CIT-213	ENST00000543324	SERPINB10	P48595	397 aa		5.87	□□□□□ -1.47
CIT-213	ENST00000543324	NR0B1	P51843	470 aa	Known RBP	5.87	□□□□□ -1.47
CIT-213	ENST00000543324	HSF1	Q00613	529 aa		5.87	□□□□□ -1.47
CIT-213	ENST00000543324	IFITM2	Q01629	132 aa		5.87	□□□□□ -1.47
CIT-213	ENST00000543324	TNFRSF17	Q02223	184 aa		5.87	□□□□□ -1.47
CIT-213	ENST00000543324	IRF8	Q02556	426 aa		5.87	□□□□□ -1.47
CIT-213	ENST00000543324	AQP6	Q13520	282 aa		5.87	□□□□□ -1.47
CIT-213	ENST00000543324	SERTAD2	Q14140	314 aa		5.87	□□□□□ -1.47

Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms