RNA–Protein interactions for RNA: ENST00000543205.1

CLIP1-217, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 2,018 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-217ENST00000543205 RRP9O43818 475 aaKnown RBP4.73□□□□□ -1.65
CLIP1-217ENST00000543205 VPS4BO75351 444 aa4.73□□□□□ -1.65
CLIP1-217ENST00000543205 ANXA4P09525 319 aaPredicted RBP4.73□□□□□ -1.65
CLIP1-217ENST00000543205 NR2F6P10588 404 aa4.73□□□□□ -1.65
CLIP1-217ENST00000543205 MAOAP21397 527 aa4.73□□□□□ -1.65
CLIP1-217ENST00000543205 PRPH2P23942 346 aa4.73□□□□□ -1.65
CLIP1-217ENST00000543205 PPP2R1BP30154 601 aa4.73□□□□□ -1.65
CLIP1-217ENST00000543205 TIA1P31483 386 aaKnown RBP eCLIP4.73□□□□□ -1.65
CLIP1-217ENST00000543205 GSTM5P46439 218 aa4.73□□□□□ -1.65
CLIP1-217ENST00000543205 HNRNPH2P55795 449 aaKnown RBP4.73□□□□□ -1.65
CLIP1-217ENST00000543205 PER3P56645 1201 aa4.73□□□□□ -1.65
CLIP1-217ENST00000543205 BTG2P78543 158 aa4.73□□□□□ -1.65
CLIP1-217ENST00000543205 RHAGQ02094 409 aa4.73□□□□□ -1.65
CLIP1-217ENST00000543205 TNFRSF17Q02223 184 aa4.73□□□□□ -1.65
CLIP1-217ENST00000543205 STX4Q12846 297 aa4.73□□□□□ -1.65
CLIP1-217ENST00000543205 ATP1A4Q13733 1029 aa4.73□□□□□ -1.65
CLIP1-217ENST00000543205 MLANAQ16655 118 aa4.73□□□□□ -1.65
CLIP1-217ENST00000543205 DEFB109BQ30KR1 87 aa4.73□□□□□ -1.65
CLIP1-217ENST00000543205 PLEKHN1Q494U1 663 aaPredicted RBP4.73□□□□□ -1.65
CLIP1-217ENST00000543205 ATP6AP1LQ52LC2 224 aa4.73□□□□□ -1.65
CLIP1-217ENST00000543205 C18orf63Q68DL7 685 aa4.73□□□□□ -1.65
CLIP1-217ENST00000543205 QSOX2Q6ZRP7 698 aa4.73□□□□□ -1.65
CLIP1-217ENST00000543205 Q6ZSR9 355 aa4.73□□□□□ -1.65
CLIP1-217ENST00000543205 PPP1R32Q7Z5V6 425 aa4.73□□□□□ -1.65
CLIP1-217ENST00000543205 CLNKQ7Z7G1 428 aa4.73□□□□□ -1.65
CLIP1-217ENST00000543205 MRGPREQ86SM8 312 aa4.73□□□□□ -1.65
CLIP1-217ENST00000543205 PLPP5Q8NEB5 264 aa4.73□□□□□ -1.65
CLIP1-217ENST00000543205 C7orf57Q8NEG2 295 aa4.73□□□□□ -1.65
CLIP1-217ENST00000543205 OR2T11Q8NH01 316 aa4.73□□□□□ -1.65
CLIP1-217ENST00000543205 ADAMTS17Q8TE56 1095 aa4.73□□□□□ -1.65
CLIP1-217ENST00000543205 TANKQ92844 425 aa4.73□□□□□ -1.65
CLIP1-217ENST00000543205 C19orf60Q96EN9 201 aa4.73□□□□□ -1.65
CLIP1-217ENST00000543205 METTL2AQ96IZ6 378 aaKnown RBP4.73□□□□□ -1.65
CLIP1-217ENST00000543205 PPP1R36Q96LQ0 422 aa4.73□□□□□ -1.65
CLIP1-217ENST00000543205 CATSPER2Q96P56 530 aa4.73□□□□□ -1.65
CLIP1-217ENST00000543205 SLC39A3Q9BRY0 314 aa4.73□□□□□ -1.65
CLIP1-217ENST00000543205 EBPLQ9BY08 206 aa4.73□□□□□ -1.65
CLIP1-217ENST00000543205 SLC25A32Q9H2D1 315 aa4.73□□□□□ -1.65
CLIP1-217ENST00000543205 RPF2Q9H7B2 306 aaKnown RBP4.73□□□□□ -1.65
CLIP1-217ENST00000543205 ATAD3AQ9NVI7 634 aa4.73□□□□□ -1.65
CLIP1-217ENST00000543205 SIRT5Q9NXA8 310 aa4.73□□□□□ -1.65
CLIP1-217ENST00000543205 KLHL14Q9P2G3 628 aa4.73□□□□□ -1.65
CLIP1-217ENST00000543205 ASH2LQ9UBL3 628 aa4.73□□□□□ -1.65
CLIP1-217ENST00000543205 MARCOQ9UEW3 520 aaPredicted RBP4.73□□□□□ -1.65
CLIP1-217ENST00000543205 ZDHHC8Q9ULC8 765 aa4.73□□□□□ -1.65
CLIP1-217ENST00000543205 ATG4BQ9Y4P1 393 aa4.73□□□□□ -1.65
CLIP1-217ENST00000543205 MMACHCQ9Y4U1 282 aa4.73□□□□□ -1.65
CLIP1-217ENST00000543205 POLR3HQ9Y535 204 aaPredicted RBP4.73□□□□□ -1.65
CLIP1-217ENST00000543205 ASB4Q9Y574 426 aa4.73□□□□□ -1.65
CLIP1-217ENST00000543205 APC2O95996 2303 aa4.73□□□□□ -1.65
CLIP1-217ENST00000543205 AHCTF1Q8WYP5 2266 aa4.73□□□□□ -1.65
CLIP1-217ENST00000543205 LAMA5O15230 3695 aa4.73□□□□□ -1.65
CLIP1-217ENST00000543205 LOC102723971A0A1B0GUV8 181 aa4.73□□□□□ -1.65
CLIP1-217ENST00000543205 ATP6AP2A0A1C7CYW4 349 aa4.73□□□□□ -1.65
CLIP1-217ENST00000543205 A0A1W2PR48 441 aa4.73□□□□□ -1.65
CLIP1-217ENST00000543205 ARGFXA6NJG6 315 aa4.73□□□□□ -1.65
CLIP1-217ENST00000543205 SAC3D1A6NKF1 404 aa4.73□□□□□ -1.65
CLIP1-217ENST00000543205 NPIPB8E9PQR5 432 aa4.73□□□□□ -1.65
CLIP1-217ENST00000543205 SOCS6O14544 535 aa4.73□□□□□ -1.65
CLIP1-217ENST00000543205 LSM1O15116 133 aaKnown RBP4.73□□□□□ -1.65
CLIP1-217ENST00000543205 HDAC3O15379 428 aa4.73□□□□□ -1.65
CLIP1-217ENST00000543205 CTNSO60931 367 aa4.73□□□□□ -1.65
CLIP1-217ENST00000543205 LDB3O75112 727 aa4.73□□□□□ -1.65
CLIP1-217ENST00000543205 ATP6AP2O75787 350 aa4.73□□□□□ -1.65
CLIP1-217ENST00000543205 SEC14L2O76054 403 aa4.73□□□□□ -1.65
CLIP1-217ENST00000543205 LY86O95711 162 aa4.73□□□□□ -1.65
CLIP1-217ENST00000543205 AIFM1O95831 613 aa4.73□□□□□ -1.65
CLIP1-217ENST00000543205 IFNA16P05015 189 aa4.73□□□□□ -1.65
CLIP1-217ENST00000543205 RRADP55042 308 aa4.73□□□□□ -1.65
CLIP1-217ENST00000543205 OR4D2P58180 307 aa4.73□□□□□ -1.65
CLIP1-217ENST00000543205 FAM3BP58499 235 aaPredicted RBP4.73□□□□□ -1.65
CLIP1-217ENST00000543205 TAS2R50P59544 299 aa4.73□□□□□ -1.65
CLIP1-217ENST00000543205 RPL38P63173 70 aaKnown RBP4.73□□□□□ -1.65
CLIP1-217ENST00000543205 RAE1P78406 368 aaKnown RBP4.73□□□□□ -1.65
CLIP1-217ENST00000543205 EEF1A2Q05639 463 aaKnown RBP4.73□□□□□ -1.65
CLIP1-217ENST00000543205 ZNF763Q0D2J5 394 aa4.73□□□□□ -1.65
CLIP1-217ENST00000543205 AIMP2Q13155 320 aaKnown RBP4.73□□□□□ -1.65
CLIP1-217ENST00000543205 MAD2L1Q13257 205 aaPredicted RBP4.73□□□□□ -1.65
CLIP1-217ENST00000543205 SERTAD2Q14140 314 aa4.73□□□□□ -1.65
CLIP1-217ENST00000543205 SFT2D3Q587I9 215 aa4.73□□□□□ -1.65
CLIP1-217ENST00000543205 XKR7Q5GH72 579 aa4.73□□□□□ -1.65
CLIP1-217ENST00000543205 EMC4Q5J8M3 183 aa4.73□□□□□ -1.65
CLIP1-217ENST00000543205 NDUFAF5Q5TEU4 345 aa4.73□□□□□ -1.65
CLIP1-217ENST00000543205 OR52E8Q6IFG1 317 aa4.73□□□□□ -1.65
CLIP1-217ENST00000543205 NOXRED1Q6NXP6 359 aa4.73□□□□□ -1.65
CLIP1-217ENST00000543205 TMEM205Q6UW68 189 aa4.73□□□□□ -1.65
CLIP1-217ENST00000543205 KIRREL2Q6UWL6 708 aa4.73□□□□□ -1.65
CLIP1-217ENST00000543205 RBPMS2Q6ZRY4 209 aaKnown RBP4.73□□□□□ -1.65
CLIP1-217ENST00000543205 NDUFAF7Q7L592 441 aa4.73□□□□□ -1.65
CLIP1-217ENST00000543205 CPEB2Q7Z5Q1 589 aaKnown RBP4.73□□□□□ -1.65
CLIP1-217ENST00000543205 ANKRD37Q7Z713 158 aa4.73□□□□□ -1.65
CLIP1-217ENST00000543205 TMEM132CQ8N3T6 1108 aa4.73□□□□□ -1.65
CLIP1-217ENST00000543205 FNDC5Q8NAU1 212 aa4.73□□□□□ -1.65
CLIP1-217ENST00000543205 CDC26Q8NHZ8 85 aa4.73□□□□□ -1.65
CLIP1-217ENST00000543205 C16orf78Q8WTQ4 265 aa4.73□□□□□ -1.65
CLIP1-217ENST00000543205 TSLPQ969D9 159 aa4.73□□□□□ -1.65
CLIP1-217ENST00000543205 C8orf44Q96CB5 159 aa4.73□□□□□ -1.65
CLIP1-217ENST00000543205 TM4SF18Q96CE8 201 aa4.73□□□□□ -1.65
CLIP1-217ENST00000543205 C3orf30Q96M34 536 aa4.73□□□□□ -1.65
CLIP1-217ENST00000543205 PIMREGQ9BSJ6 248 aa4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms