RNA–Protein interactions for RNA: ENST00000543004.5

OTUB1-211, Transcript of OTU deubiquitinase, ubiquitin aldehyde binding 1, humanhuman

TSL 5 BASIC

Gene OTUB1, Length 1,647 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTUB1-211ENST00000543004 TAMM41Q96BW9 452 aa19■□□□□ 0.63
OTUB1-211ENST00000543004 SUCOQ9UBS9 1254 aaKnown RBP19■□□□□ 0.63
OTUB1-211ENST00000543004 PRPF19Q9UMS4 504 aaKnown RBP19■□□□□ 0.63
OTUB1-211ENST00000543004 CXCR6O00574 342 aa18.99■□□□□ 0.63
OTUB1-211ENST00000543004 GSTA4O15217 222 aa18.99■□□□□ 0.63
OTUB1-211ENST00000543004 TPST1O60507 370 aa18.99■□□□□ 0.63
OTUB1-211ENST00000543004 TRIM3O75382 744 aaPredicted RBP18.99■□□□□ 0.63
OTUB1-211ENST00000543004 DNAJC8O75937 253 aaPredicted RBP18.99■□□□□ 0.63
OTUB1-211ENST00000543004 MFN2O95140 757 aa18.99■□□□□ 0.63
OTUB1-211ENST00000543004 RFPL3SP0C7P2 107 aa18.99■□□□□ 0.63
OTUB1-211ENST00000543004 PABPC4LP0CB38 370 aaKnown RBP18.99■□□□□ 0.63
OTUB1-211ENST00000543004 ETS2P15036 469 aa18.99■□□□□ 0.63
OTUB1-211ENST00000543004 HTR1EP28566 365 aa18.99■□□□□ 0.63
OTUB1-211ENST00000543004 FGFBP1Q14512 234 aa18.99■□□□□ 0.63
OTUB1-211ENST00000543004 CBLN3Q6UW01 205 aa18.99■□□□□ 0.63
OTUB1-211ENST00000543004 ZNF836Q6ZNA1 936 aa18.99■□□□□ 0.63
OTUB1-211ENST00000543004 PEX5LQ8IYB4 626 aa18.99■□□□□ 0.63
OTUB1-211ENST00000543004 TEX19Q8NA77 164 aa18.99■□□□□ 0.63
OTUB1-211ENST00000543004 OR10Q1Q8NGQ4 319 aa18.99■□□□□ 0.63
OTUB1-211ENST00000543004 WDR60Q8WVS4 1066 aa18.99■□□□□ 0.63
OTUB1-211ENST00000543004 PNPLA2Q96AD5 504 aa18.99■□□□□ 0.63
OTUB1-211ENST00000543004 SH3YL1Q96HL8 342 aaPredicted RBP18.99■□□□□ 0.63
OTUB1-211ENST00000543004 FRMD6Q96NE9 622 aa18.99■□□□□ 0.63
OTUB1-211ENST00000543004 GNRHR2Q96P88 292 aa18.99■□□□□ 0.63
OTUB1-211ENST00000543004 BBC3Q96PG8 261 aaPredicted RBP18.99■□□□□ 0.63
OTUB1-211ENST00000543004 TAAR6Q96RI8 345 aa18.99■□□□□ 0.63
OTUB1-211ENST00000543004 FAM173AQ9BQD7 235 aa18.99■□□□□ 0.63
OTUB1-211ENST00000543004 LRMDAQ9H2I8 198 aa18.99■□□□□ 0.63
OTUB1-211ENST00000543004 ZNF443Q9Y2A4 671 aaPredicted RBP18.99■□□□□ 0.63
OTUB1-211ENST00000543004 PCDHGB6Q9Y5F9 930 aa18.99■□□□□ 0.63
OTUB1-211ENST00000543004 A0A1W2PQD3 144 aa18.98■□□□□ 0.63
OTUB1-211ENST00000543004 LRRC3CA6NJW4 275 aa18.98■□□□□ 0.63
OTUB1-211ENST00000543004 EPPINO95925 133 aa18.98■□□□□ 0.63
OTUB1-211ENST00000543004 DBIP07108 87 aaKnown RBP18.98■□□□□ 0.63
OTUB1-211ENST00000543004 GGT1P19440 569 aa18.98■□□□□ 0.63
OTUB1-211ENST00000543004 KDELR2P33947 212 aa18.98■□□□□ 0.63
OTUB1-211ENST00000543004 PGM1P36871 562 aa18.98■□□□□ 0.63
OTUB1-211ENST00000543004 MASP1P48740 699 aa18.98■□□□□ 0.63
OTUB1-211ENST00000543004 RASSF2P50749 326 aa18.98■□□□□ 0.63
OTUB1-211ENST00000543004 LRRC23Q53EV4 343 aaPredicted RBP18.98■□□□□ 0.63
OTUB1-211ENST00000543004 ZNF311Q5JNZ3 666 aa18.98■□□□□ 0.63
OTUB1-211ENST00000543004 RNFT1Q5M7Z0 435 aa18.98■□□□□ 0.63
OTUB1-211ENST00000543004 TBCELQ5QJ74 424 aa18.98■□□□□ 0.63
OTUB1-211ENST00000543004 CCDC80Q76M96 950 aa18.98■□□□□ 0.63
OTUB1-211ENST00000543004 ASRGL1Q7L266 308 aa18.98■□□□□ 0.63
OTUB1-211ENST00000543004 CLIP4Q8N3C7 705 aa18.98■□□□□ 0.63
OTUB1-211ENST00000543004 CCDC124Q96CT7 223 aaKnown RBP18.98■□□□□ 0.63
OTUB1-211ENST00000543004 WBP1Q96G27 269 aa18.98■□□□□ 0.63
OTUB1-211ENST00000543004 MED11Q9P086 117 aa18.98■□□□□ 0.63
OTUB1-211ENST00000543004 FBXL2Q9UKC9 423 aa18.98■□□□□ 0.63
OTUB1-211ENST00000543004 CARD8Q9Y2G2 431 aa18.98■□□□□ 0.63
OTUB1-211ENST00000543004 KLRC4-KLRK1H3BQV0 150 aa18.97■□□□□ 0.63
OTUB1-211ENST00000543004 SNX4O95219 450 aa18.97■□□□□ 0.63
OTUB1-211ENST00000543004 UBTFL6P0CB48 400 aaPredicted RBP18.97■□□□□ 0.63
OTUB1-211ENST00000543004 SFTPCP11686 197 aa18.97■□□□□ 0.63
OTUB1-211ENST00000543004 NID1P14543 1247 aa18.97■□□□□ 0.63
OTUB1-211ENST00000543004 CLK3P49761 638 aaKnown RBP18.97■□□□□ 0.63
OTUB1-211ENST00000543004 EEF1A1P68104 462 aaKnown RBP18.97■□□□□ 0.63
OTUB1-211ENST00000543004 KCNJ10P78508 379 aa18.97■□□□□ 0.63
OTUB1-211ENST00000543004 MS4A2Q01362 244 aa18.97■□□□□ 0.63
OTUB1-211ENST00000543004 ZNF117Q03924 483 aa18.97■□□□□ 0.63
OTUB1-211ENST00000543004 FXNQ16595 210 aa18.97■□□□□ 0.63
OTUB1-211ENST00000543004 DUSP7Q16829 419 aa18.97■□□□□ 0.63
OTUB1-211ENST00000543004 MRPL2Q5T653 305 aaKnown RBP18.97■□□□□ 0.63
OTUB1-211ENST00000543004 INTS11Q5TA45 600 aaKnown RBP18.97■□□□□ 0.63
OTUB1-211ENST00000543004 GLYATQ6IB77 296 aa18.97■□□□□ 0.63
OTUB1-211ENST00000543004 PACS2Q86VP3 889 aa18.97■□□□□ 0.63
OTUB1-211ENST00000543004 LSRQ86X29 649 aaPredicted RBP18.97■□□□□ 0.63
OTUB1-211ENST00000543004 KRT73Q86Y46 540 aa18.97■□□□□ 0.63
OTUB1-211ENST00000543004 ARMC8Q8IUR7 673 aa18.97■□□□□ 0.63
OTUB1-211ENST00000543004 SLC30A8Q8IWU4 369 aa18.97■□□□□ 0.63
OTUB1-211ENST00000543004 CNOT9Q92600 299 aaKnown RBP18.97■□□□□ 0.63
OTUB1-211ENST00000543004 UBL7Q96S82 380 aaPredicted RBP18.97■□□□□ 0.63
OTUB1-211ENST00000543004 ZNF607Q96SK3 696 aa18.97■□□□□ 0.63
OTUB1-211ENST00000543004 PPP4R1LQ9P1A2 415 aa18.97■□□□□ 0.63
OTUB1-211ENST00000543004 SEC14L3Q9UDX4 400 aa18.97■□□□□ 0.63
OTUB1-211ENST00000543004 SPTA1P02549 2419 aa18.97■□□□□ 0.63
OTUB1-211ENST00000543004 TMEM229AB2RXF0 380 aa18.96■□□□□ 0.63
OTUB1-211ENST00000543004 CYP7B1O75881 506 aa18.96■□□□□ 0.63
OTUB1-211ENST00000543004 WISP2O76076 250 aa18.96■□□□□ 0.63
OTUB1-211ENST00000543004 CSTAP01040 98 aa18.96■□□□□ 0.63
OTUB1-211ENST00000543004 ME2P23368 584 aa18.96■□□□□ 0.63
OTUB1-211ENST00000543004 PGM2L1Q6PCE3 622 aa18.96■□□□□ 0.63
OTUB1-211ENST00000543004 PATL1Q86TB9 770 aaKnown RBP18.96■□□□□ 0.63
OTUB1-211ENST00000543004 ARHGAP24Q8N264 748 aa18.96■□□□□ 0.63
OTUB1-211ENST00000543004 GPR32P1Q8NGA4 272 aa18.96■□□□□ 0.63
OTUB1-211ENST00000543004 PMM1Q92871 262 aa18.96■□□□□ 0.63
OTUB1-211ENST00000543004 TMEM41AQ96HV5 264 aa18.96■□□□□ 0.63
OTUB1-211ENST00000543004 WFDC6Q9BQY6 131 aa18.96■□□□□ 0.63
OTUB1-211ENST00000543004 TTTY12Q9BZ98 90 aa18.96■□□□□ 0.63
OTUB1-211ENST00000543004 FAM166BA8MTA8 275 aa18.96■□□□□ 0.63
OTUB1-211ENST00000543004 SNPHO15079 494 aa18.96■□□□□ 0.63
OTUB1-211ENST00000543004 ARPC2O15144 300 aa18.96■□□□□ 0.63
OTUB1-211ENST00000543004 ATXN7O15265 892 aaPredicted RBP18.96■□□□□ 0.63
OTUB1-211ENST00000543004 FRS3O43559 492 aa18.96■□□□□ 0.63
OTUB1-211ENST00000543004 ADAM11O75078 769 aa18.96■□□□□ 0.63
OTUB1-211ENST00000543004 THBS1P07996 1170 aa18.96■□□□□ 0.63
OTUB1-211ENST00000543004 UBL4AP11441 157 aa18.96■□□□□ 0.63
OTUB1-211ENST00000543004 C17orf67Q0P5P2 114 aa18.96■□□□□ 0.63
OTUB1-211ENST00000543004 KLRB1Q12918 225 aa18.96■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms