RNA–Protein interactions for RNA: ENST00000542838.5

DDX11-223, Transcript of DEAD/H-box helicase 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX11, Length 3,079 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-223ENST00000542838 PRDM7Q9NQW5 492 aa12.05□□□□□ -0.48
DDX11-223ENST00000542838 EIF3KQ9UBQ5 218 aaKnown RBP12.05□□□□□ -0.48
DDX11-223ENST00000542838 KCNN3Q9UGI6 736 aa12.05□□□□□ -0.48
DDX11-223ENST00000542838 SPEF1Q9Y4P9 236 aa12.05□□□□□ -0.48
DDX11-223ENST00000542838 E9PI62 339 aa12.04□□□□□ -0.48
DDX11-223ENST00000542838 TPOP07202 933 aa12.04□□□□□ -0.48
DDX11-223ENST00000542838 SYPP08247 313 aa12.04□□□□□ -0.48
DDX11-223ENST00000542838 CD3GP09693 182 aa12.04□□□□□ -0.48
DDX11-223ENST00000542838 ZGLP1P0C6A0 271 aa12.04□□□□□ -0.48
DDX11-223ENST00000542838 F3P13726 295 aa12.04□□□□□ -0.48
DDX11-223ENST00000542838 FUT1P19526 365 aa12.04□□□□□ -0.48
DDX11-223ENST00000542838 CXCL3P19876 107 aa12.04□□□□□ -0.48
DDX11-223ENST00000542838 ATP5A1P25705 553 aaKnown RBP12.04□□□□□ -0.48
DDX11-223ENST00000542838 CERS1P27544 350 aa12.04□□□□□ -0.48
DDX11-223ENST00000542838 SLC16A1P53985 500 aa12.04□□□□□ -0.48
DDX11-223ENST00000542838 SRP54P61011 504 aaKnown RBP12.04□□□□□ -0.48
DDX11-223ENST00000542838 RPS7P62081 194 aaKnown RBP12.04□□□□□ -0.48
DDX11-223ENST00000542838 NTHL1P78549 312 aa12.04□□□□□ -0.48
DDX11-223ENST00000542838 SHC2P98077 582 aa12.04□□□□□ -0.48
DDX11-223ENST00000542838 GALEQ14376 348 aa12.04□□□□□ -0.48
DDX11-223ENST00000542838 LTB4RQ15722 352 aa12.04□□□□□ -0.48
DDX11-223ENST00000542838 SLC25A35Q3KQZ1 300 aa12.04□□□□□ -0.48
DDX11-223ENST00000542838 SLC36A2Q495M3 483 aa12.04□□□□□ -0.48
DDX11-223ENST00000542838 MRM1Q6IN84 353 aaKnown RBP12.04□□□□□ -0.48
DDX11-223ENST00000542838 OR6C4Q8NGE1 309 aa12.04□□□□□ -0.48
DDX11-223ENST00000542838 OTUB2Q96DC9 234 aa12.04□□□□□ -0.48
DDX11-223ENST00000542838 VWCEQ96DN2 955 aa12.04□□□□□ -0.48
DDX11-223ENST00000542838 SLC35A4Q96G79 324 aa12.04□□□□□ -0.48
DDX11-223ENST00000542838 C12orf66Q96MD2 445 aa12.04□□□□□ -0.48
DDX11-223ENST00000542838 OR2M2Q96R28 347 aa12.04□□□□□ -0.48
DDX11-223ENST00000542838 KRCC1Q9NPI7 259 aaPredicted RBP12.04□□□□□ -0.48
DDX11-223ENST00000542838 ADH5P11766 374 aa12.04□□□□□ -0.48
DDX11-223ENST00000542838 GIFP27352 417 aa12.04□□□□□ -0.48
DDX11-223ENST00000542838 CLDN2P57739 230 aa12.04□□□□□ -0.48
DDX11-223ENST00000542838 E2F1Q01094 437 aa12.04□□□□□ -0.48
DDX11-223ENST00000542838 ZIC1Q15915 447 aa12.04□□□□□ -0.48
DDX11-223ENST00000542838 TMEM52BQ4KMG9 183 aa12.04□□□□□ -0.48
DDX11-223ENST00000542838 SLC48A1Q6P1K1 146 aa12.04□□□□□ -0.48
DDX11-223ENST00000542838 ABHD17CQ6PCB6 329 aa12.04□□□□□ -0.48
DDX11-223ENST00000542838 OR2A1Q8NGT9 310 aa12.04□□□□□ -0.48
DDX11-223ENST00000542838 WFIKKN2Q8TEU8 576 aa12.04□□□□□ -0.48
DDX11-223ENST00000542838 OMA1Q96E52 524 aa12.04□□□□□ -0.48
DDX11-223ENST00000542838 AHCYL2Q96HN2 611 aaKnown RBP12.04□□□□□ -0.48
DDX11-223ENST00000542838 NDC1Q9BTX1 674 aa12.04□□□□□ -0.48
DDX11-223ENST00000542838 HCAR1Q9BXC0 346 aa12.04□□□□□ -0.48
DDX11-223ENST00000542838 C1QTNF2Q9BXJ5 285 aa12.04□□□□□ -0.48
DDX11-223ENST00000542838 ACTRT3Q9BYD9 372 aa12.04□□□□□ -0.48
DDX11-223ENST00000542838 CES1P1Q9UKY3 287 aa12.04□□□□□ -0.48
DDX11-223ENST00000542838 ZNF443Q9Y2A4 671 aaPredicted RBP12.04□□□□□ -0.48
DDX11-223ENST00000542838 CARNS1A5YM72 827 aa12.03□□□□□ -0.48
DDX11-223ENST00000542838 UNC119BA6NIH7 251 aa12.03□□□□□ -0.48
DDX11-223ENST00000542838 PRRT4C9JH25 899 aa12.03□□□□□ -0.48
DDX11-223ENST00000542838 MT-ND5P03915 603 aa12.03□□□□□ -0.48
DDX11-223ENST00000542838 MRPL3P09001 348 aaKnown RBP12.03□□□□□ -0.48
DDX11-223ENST00000542838 RGS1Q08116 209 aa12.03□□□□□ -0.48
DDX11-223ENST00000542838 PUS10Q3MIT2 529 aaKnown RBP12.03□□□□□ -0.48
DDX11-223ENST00000542838 HACD4Q5VWC8 232 aa12.03□□□□□ -0.48
DDX11-223ENST00000542838 IDO2Q6ZQW0 420 aa12.03□□□□□ -0.48
DDX11-223ENST00000542838 TPRA1Q86W33 373 aa12.03□□□□□ -0.48
DDX11-223ENST00000542838 OR52L1Q8NGH7 329 aa12.03□□□□□ -0.48
DDX11-223ENST00000542838 ABHD4Q8TB40 342 aa12.03□□□□□ -0.48
DDX11-223ENST00000542838 FANK1Q8TC84 345 aa12.03□□□□□ -0.48
DDX11-223ENST00000542838 LRRC20Q8TCA0 184 aa12.03□□□□□ -0.48
DDX11-223ENST00000542838 CACNG6Q9BXT2 260 aa12.03□□□□□ -0.48
DDX11-223ENST00000542838 MRPS7Q9Y2R9 242 aaKnown RBP12.03□□□□□ -0.48
DDX11-223ENST00000542838 A0A0G2JK05 382 aa12.03□□□□□ -0.48
DDX11-223ENST00000542838 B8ZZF3 427 aa12.03□□□□□ -0.48
DDX11-223ENST00000542838 PDGFAP04085 211 aa12.03□□□□□ -0.48
DDX11-223ENST00000542838 CDK3Q00526 305 aa12.03□□□□□ -0.48
DDX11-223ENST00000542838 AGERQ15109 404 aa12.03□□□□□ -0.48
DDX11-223ENST00000542838 POU4F3Q15319 338 aa12.03□□□□□ -0.48
DDX11-223ENST00000542838 PRPF38BQ5VTL8 546 aaKnown RBP12.03□□□□□ -0.48
DDX11-223ENST00000542838 FRRS1Q6ZNA5 592 aa12.03□□□□□ -0.48
DDX11-223ENST00000542838 SIAH3Q8IW03 269 aa12.03□□□□□ -0.48
DDX11-223ENST00000542838 ING5Q8WYH8 240 aa12.03□□□□□ -0.48
DDX11-223ENST00000542838 INSM2Q96T92 566 aaPredicted RBP12.03□□□□□ -0.48
DDX11-223ENST00000542838 SMAD5Q99717 465 aaKnown RBP12.03□□□□□ -0.48
DDX11-223ENST00000542838 DPCDQ9BVM2 203 aaPredicted RBP12.03□□□□□ -0.48
DDX11-223ENST00000542838 CACYBPQ9HB71 228 aaKnown RBP12.03□□□□□ -0.48
DDX11-223ENST00000542838 MRPS30Q9NP92 439 aaKnown RBP12.03□□□□□ -0.48
DDX11-223ENST00000542838 MOSPD1Q9UJG1 213 aa12.03□□□□□ -0.48
DDX11-223ENST00000542838 J3QLW9 94 aa12.02□□□□□ -0.48
DDX11-223ENST00000542838 PLPP2O43688 288 aa12.02□□□□□ -0.48
DDX11-223ENST00000542838 ZNF19P17023 458 aa12.02□□□□□ -0.48
DDX11-223ENST00000542838 BMP7P18075 431 aa12.02□□□□□ -0.48
DDX11-223ENST00000542838 ACVR1BP36896 505 aa12.02□□□□□ -0.48
DDX11-223ENST00000542838 CCR6P51684 374 aa12.02□□□□□ -0.48
DDX11-223ENST00000542838 FGFBP1Q14512 234 aa12.02□□□□□ -0.48
DDX11-223ENST00000542838 COL28A1Q2UY09 1125 aa12.02□□□□□ -0.48
DDX11-223ENST00000542838 HNRNPA1L2Q32P51 320 aaKnown RBP12.02□□□□□ -0.48
DDX11-223ENST00000542838 ADAMTSL4Q6UY14 1074 aa12.02□□□□□ -0.48
DDX11-223ENST00000542838 BMPERQ8N8U9 685 aa12.02□□□□□ -0.48
DDX11-223ENST00000542838 BRIX1Q8TDN6 353 aaKnown RBP12.02□□□□□ -0.48
DDX11-223ENST00000542838 MARVELD3Q96A59 401 aa12.02□□□□□ -0.48
DDX11-223ENST00000542838 CCDC120Q96HB5 630 aa12.02□□□□□ -0.48
DDX11-223ENST00000542838 ZFP3Q96NJ6 502 aa12.02□□□□□ -0.48
DDX11-223ENST00000542838 ENKD1Q9H0I2 346 aa12.02□□□□□ -0.48
DDX11-223ENST00000542838 OR51V1Q9H2C8 321 aa12.02□□□□□ -0.48
DDX11-223ENST00000542838 FN3KQ9H479 309 aa12.02□□□□□ -0.48
DDX11-223ENST00000542838 C6orf106Q9H6K1 298 aaPredicted RBP12.02□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms