RNA–Protein interactions for RNA: ENST00000542685.5

XRCC4-206, Transcript of X-ray repair cross complementing 4, humanhuman

TSL 1 (best)

Gene XRCC4, Length 1,243 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-206ENST00000542685 TCAPO15273 167 aa5.43□□□□□ -1.54
XRCC4-206ENST00000542685 CHP2O43745 196 aa5.43□□□□□ -1.54
XRCC4-206ENST00000542685 SSX4O60224 188 aa5.43□□□□□ -1.54
XRCC4-206ENST00000542685 LCMT2O60294 686 aaKnown RBP5.43□□□□□ -1.54
XRCC4-206ENST00000542685 POP7O75817 140 aaKnown RBP5.43□□□□□ -1.54
XRCC4-206ENST00000542685 CABYRO75952 493 aa5.43□□□□□ -1.54
XRCC4-206ENST00000542685 CLIC3O95833 236 aa5.43□□□□□ -1.54
XRCC4-206ENST00000542685 KLK3P07288 261 aaPredicted RBP5.43□□□□□ -1.54
XRCC4-206ENST00000542685 ASGR1P07306 291 aa5.43□□□□□ -1.54
XRCC4-206ENST00000542685 GP1BAP07359 652 aa5.43□□□□□ -1.54
XRCC4-206ENST00000542685 CSF3P09919 207 aa5.43□□□□□ -1.54
XRCC4-206ENST00000542685 ZSCAN5DPP0CG00 497 aa5.43□□□□□ -1.54
XRCC4-206ENST00000542685 RNF224P0DH78 156 aa5.43□□□□□ -1.54
XRCC4-206ENST00000542685 PRPS2P11908 318 aa5.43□□□□□ -1.54
XRCC4-206ENST00000542685 IL1RNP18510 177 aa5.43□□□□□ -1.54
XRCC4-206ENST00000542685 RAB3BP20337 219 aa5.43□□□□□ -1.54
XRCC4-206ENST00000542685 UBA1P22314 1058 aaKnown RBP5.43□□□□□ -1.54
XRCC4-206ENST00000542685 KDELR1P24390 212 aa5.43□□□□□ -1.54
XRCC4-206ENST00000542685 HMGB2P26583 209 aaKnown RBP5.43□□□□□ -1.54
XRCC4-206ENST00000542685 MAPK3P27361 379 aaPredicted RBP5.43□□□□□ -1.54
XRCC4-206ENST00000542685 DUSP1P28562 367 aa5.43□□□□□ -1.54
XRCC4-206ENST00000542685 YWHABP31946 246 aaKnown RBP5.43□□□□□ -1.54
XRCC4-206ENST00000542685 CCR7P32248 378 aa5.43□□□□□ -1.54
XRCC4-206ENST00000542685 TNFSF8P32971 234 aa5.43□□□□□ -1.54
XRCC4-206ENST00000542685 HSPA7P48741 367 aa5.43□□□□□ -1.54
XRCC4-206ENST00000542685 CLCN3P51790 818 aa5.43□□□□□ -1.54
XRCC4-206ENST00000542685 KPNA2P52292 529 aaKnown RBP5.43□□□□□ -1.54
XRCC4-206ENST00000542685 MAZP56270 477 aaKnown RBP5.43□□□□□ -1.54
XRCC4-206ENST00000542685 HUNKP57058 714 aa5.43□□□□□ -1.54
XRCC4-206ENST00000542685 NANOS2P60321 138 aaKnown RBP5.43□□□□□ -1.54
XRCC4-206ENST00000542685 RAB2AP61019 212 aa5.43□□□□□ -1.54
XRCC4-206ENST00000542685 YWHAZP63104 245 aaKnown RBP5.43□□□□□ -1.54
XRCC4-206ENST00000542685 ZNF177Q13360 481 aaPredicted RBP5.43□□□□□ -1.54
XRCC4-206ENST00000542685 GAB1Q13480 694 aa5.43□□□□□ -1.54
XRCC4-206ENST00000542685 DPYSL3Q14195 570 aa5.43□□□□□ -1.54
XRCC4-206ENST00000542685 FASTKQ14296 549 aaKnown RBP5.43□□□□□ -1.54
XRCC4-206ENST00000542685 KRT33BQ14525 404 aa5.43□□□□□ -1.54
XRCC4-206ENST00000542685 PRPSAP1Q14558 356 aa5.43□□□□□ -1.54
XRCC4-206ENST00000542685 ARHGAP19Q14CB8 494 aa5.43□□□□□ -1.54
XRCC4-206ENST00000542685 DPYSL2Q16555 572 aa5.43□□□□□ -1.54
XRCC4-206ENST00000542685 CYP51A1Q16850 503 aa5.43□□□□□ -1.54
XRCC4-206ENST00000542685 KCTD19Q17RG1 926 aaPredicted RBP5.43□□□□□ -1.54
XRCC4-206ENST00000542685 GLYR1Q49A26 553 aaPredicted RBP5.43□□□□□ -1.54
XRCC4-206ENST00000542685 TMEM196Q5HYL7 178 aa5.43□□□□□ -1.54
XRCC4-206ENST00000542685 MANEAQ5SRI9 462 aa5.43□□□□□ -1.54
XRCC4-206ENST00000542685 ATPAF1Q5TC12 328 aaPredicted RBP5.43□□□□□ -1.54
XRCC4-206ENST00000542685 ZNF470Q6ECI4 717 aa5.43□□□□□ -1.54
XRCC4-206ENST00000542685 APOBEC3HQ6NTF7 200 aaKnown RBP5.43□□□□□ -1.54
XRCC4-206ENST00000542685 CDC42EP5Q6NZY7 148 aa5.43□□□□□ -1.54
XRCC4-206ENST00000542685 DNAJC24Q6P3W2 148 aa5.43□□□□□ -1.54
XRCC4-206ENST00000542685 SLC39A4Q6P5W5 647 aa5.43□□□□□ -1.54
XRCC4-206ENST00000542685 ZNF549Q6P9A3 640 aa5.43□□□□□ -1.54
XRCC4-206ENST00000542685 HAGHLQ6PII5 290 aaPredicted RBP5.43□□□□□ -1.54
XRCC4-206ENST00000542685 C19orf48Q6RUI8 117 aa5.43□□□□□ -1.54
XRCC4-206ENST00000542685 KLHL17Q6TDP4 642 aa5.43□□□□□ -1.54
XRCC4-206ENST00000542685 FAM198BQ6UWH4 519 aa5.43□□□□□ -1.54
XRCC4-206ENST00000542685 HSDL2Q6YN16 418 aa5.43□□□□□ -1.54
XRCC4-206ENST00000542685 C3P1Q6ZMU1 363 aa5.43□□□□□ -1.54
XRCC4-206ENST00000542685 ZNF367Q7RTV3 350 aa5.43□□□□□ -1.54
XRCC4-206ENST00000542685 DPPA2Q7Z7J5 298 aa5.43□□□□□ -1.54
XRCC4-206ENST00000542685 CCDC71Q8IV32 467 aaPredicted RBP5.43□□□□□ -1.54
XRCC4-206ENST00000542685 C10orf107Q8IVU9 208 aa5.43□□□□□ -1.54
XRCC4-206ENST00000542685 UEVLDQ8IX04 471 aa5.43□□□□□ -1.54
XRCC4-206ENST00000542685 SLC22A15Q8IZD6 547 aa5.43□□□□□ -1.54
XRCC4-206ENST00000542685 DNAJC22Q8N4W6 341 aa5.43□□□□□ -1.54
XRCC4-206ENST00000542685 POMGNT2Q8NAT1 580 aa5.43□□□□□ -1.54
XRCC4-206ENST00000542685 ZNF527Q8NB42 609 aa5.43□□□□□ -1.54
XRCC4-206ENST00000542685 OR2L5Q8NG80 312 aa5.43□□□□□ -1.54
XRCC4-206ENST00000542685 AP3S1Q92572 193 aa5.43□□□□□ -1.54
XRCC4-206ENST00000542685 TMBIM1Q969X1 311 aa5.43□□□□□ -1.54
XRCC4-206ENST00000542685 SLC25A28Q96A46 364 aa5.43□□□□□ -1.54
XRCC4-206ENST00000542685 RNF157Q96PX1 679 aa5.43□□□□□ -1.54
XRCC4-206ENST00000542685 MBOAT4Q96T53 435 aa5.43□□□□□ -1.54
XRCC4-206ENST00000542685 CDCA3Q99618 268 aaPredicted RBP5.43□□□□□ -1.54
XRCC4-206ENST00000542685 NPAS2Q99743 824 aa5.43□□□□□ -1.54
XRCC4-206ENST00000542685 TMEM175Q9BSA9 504 aa5.43□□□□□ -1.54
XRCC4-206ENST00000542685 KATNB1Q9BVA0 655 aa5.43□□□□□ -1.54
XRCC4-206ENST00000542685 PINK1Q9BXM7 581 aa5.43□□□□□ -1.54
XRCC4-206ENST00000542685 MED28Q9H204 178 aa5.43□□□□□ -1.54
XRCC4-206ENST00000542685 MAGIXQ9H6Y5 334 aa5.43□□□□□ -1.54
XRCC4-206ENST00000542685 EIF2B3Q9NR50 452 aaKnown RBP5.43□□□□□ -1.54
XRCC4-206ENST00000542685 NSMCE4AQ9NXX6 385 aa5.43□□□□□ -1.54
XRCC4-206ENST00000542685 COX16Q9P0S2 106 aa5.43□□□□□ -1.54
XRCC4-206ENST00000542685 CA14Q9ULX7 337 aa5.43□□□□□ -1.54
XRCC4-206ENST00000542685 FAM50BQ9Y247 325 aa5.43□□□□□ -1.54
XRCC4-206ENST00000542685 DLGAP4Q9Y2H0 992 aa5.43□□□□□ -1.54
XRCC4-206ENST00000542685 KCNIP3Q9Y2W7 256 aa5.43□□□□□ -1.54
XRCC4-206ENST00000542685 CMAHPQ9Y471 501 aa5.43□□□□□ -1.54
XRCC4-206ENST00000542685 V9GYQ6 96 aa5.43□□□□□ -1.54
XRCC4-206ENST00000542685 ZNF236Q9UL36 1845 aa5.43□□□□□ -1.54
XRCC4-206ENST00000542685 ZFC3H1O60293 1989 aaKnown RBP5.42□□□□□ -1.54
XRCC4-206ENST00000542685 SMCHD1A6NHR9 2005 aa5.42□□□□□ -1.54
XRCC4-206ENST00000542685 TTC3P53804 2025 aa5.42□□□□□ -1.54
XRCC4-206ENST00000542685 A0A1W2PP18 115 aa5.42□□□□□ -1.54
XRCC4-206ENST00000542685 A0A1W2PPC1 479 aa5.42□□□□□ -1.54
XRCC4-206ENST00000542685 TRAPPC13A5PLN9 417 aa5.42□□□□□ -1.54
XRCC4-206ENST00000542685 POM121BA6NF01 834 aa5.42□□□□□ -1.54
XRCC4-206ENST00000542685 H0YIV9 168 aa5.42□□□□□ -1.54
XRCC4-206ENST00000542685 H7C0S8 307 aa5.42□□□□□ -1.54
XRCC4-206ENST00000542685 K7ERI5 159 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms