RNA–Protein interactions for RNA: ENST00000541169.1

VPS33A-205, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 4

Gene VPS33A, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-205ENST00000541169 IFT52Q9Y366 437 aa17.1■□□□□ 0.33
VPS33A-205ENST00000541169 DSPPQ9NZW4 1301 aa17.1■□□□□ 0.33
VPS33A-205ENST00000541169 SERINC4A6NH21 518 aa17.09■□□□□ 0.33
VPS33A-205ENST00000541169 ZNF264O43296 627 aa17.09■□□□□ 0.33
VPS33A-205ENST00000541169 CDC40O60508 579 aaKnown RBP eCLIP17.09■□□□□ 0.33
VPS33A-205ENST00000541169 ACTL6AO96019 429 aa17.09■□□□□ 0.33
VPS33A-205ENST00000541169 BCHEP06276 602 aa17.09■□□□□ 0.33
VPS33A-205ENST00000541169 THBS1P07996 1170 aa17.09■□□□□ 0.33
VPS33A-205ENST00000541169 ARAFP10398 606 aa17.09■□□□□ 0.33
VPS33A-205ENST00000541169 IL7RP16871 459 aa17.09■□□□□ 0.33
VPS33A-205ENST00000541169 DPP4P27487 766 aa17.09■□□□□ 0.33
VPS33A-205ENST00000541169 LARS2Q15031 903 aaKnown RBP17.09■□□□□ 0.33
VPS33A-205ENST00000541169 IGFBP7Q16270 282 aa17.09■□□□□ 0.33
VPS33A-205ENST00000541169 NHSL2Q5HYW2 709 aa17.09■□□□□ 0.33
VPS33A-205ENST00000541169 AAGABQ6PD74 315 aa17.09■□□□□ 0.33
VPS33A-205ENST00000541169 APOOLQ6UXV4 268 aa17.09■□□□□ 0.33
VPS33A-205ENST00000541169 Q6ZPB1 254 aaPredicted RBP17.09■□□□□ 0.33
VPS33A-205ENST00000541169 ANKFN1Q8N957 763 aa17.09■□□□□ 0.33
VPS33A-205ENST00000541169 BHLHE22Q8NFJ8 381 aaPredicted RBP17.09■□□□□ 0.33
VPS33A-205ENST00000541169 OR2M3Q8NG83 312 aa17.09■□□□□ 0.33
VPS33A-205ENST00000541169 B4GALNT2Q8NHY0 566 aa17.09■□□□□ 0.33
VPS33A-205ENST00000541169 PHOSPHO1Q8TCT1 267 aa17.09■□□□□ 0.33
VPS33A-205ENST00000541169 BCAS4Q8TDM0 211 aa17.09■□□□□ 0.33
VPS33A-205ENST00000541169 ZNF607Q96SK3 696 aa17.09■□□□□ 0.33
VPS33A-205ENST00000541169 ECSITQ9BQ95 431 aa17.09■□□□□ 0.33
VPS33A-205ENST00000541169 TSPAN10Q9H1Z9 355 aaPredicted RBP17.09■□□□□ 0.33
VPS33A-205ENST00000541169 NDE1Q9NXR1 346 aa17.09■□□□□ 0.33
VPS33A-205ENST00000541169 TAS2R10Q9NYW0 307 aa17.09■□□□□ 0.33
VPS33A-205ENST00000541169 ANGPT4Q9Y264 503 aa17.09■□□□□ 0.33
VPS33A-205ENST00000541169 ZNF835Q9Y2P0 537 aa17.09■□□□□ 0.33
VPS33A-205ENST00000541169 BSNQ9UPA5 3926 aa17.09■□□□□ 0.33
VPS33A-205ENST00000541169 C2orf72A6NCS6 295 aa17.08■□□□□ 0.32
VPS33A-205ENST00000541169 PRRG2O14669 202 aa17.08■□□□□ 0.32
VPS33A-205ENST00000541169 ADAM10O14672 748 aa17.08■□□□□ 0.32
VPS33A-205ENST00000541169 HCRTR2O43614 444 aa17.08■□□□□ 0.32
VPS33A-205ENST00000541169 SLC19A2O60779 497 aa17.08■□□□□ 0.32
VPS33A-205ENST00000541169 PDE9AO76083 593 aa17.08■□□□□ 0.32
VPS33A-205ENST00000541169 WISP1O95388 367 aa17.08■□□□□ 0.32
VPS33A-205ENST00000541169 CHRM4P08173 479 aa17.08■□□□□ 0.32
VPS33A-205ENST00000541169 HOXD4P09016 255 aaPredicted RBP17.08■□□□□ 0.32
VPS33A-205ENST00000541169 UBL4AP11441 157 aa17.08■□□□□ 0.32
VPS33A-205ENST00000541169 CD1EP15812 388 aa17.08■□□□□ 0.32
VPS33A-205ENST00000541169 ABOP16442 354 aa17.08■□□□□ 0.32
VPS33A-205ENST00000541169 RPS4Y1P22090 263 aaKnown RBP17.08■□□□□ 0.32
VPS33A-205ENST00000541169 CHMP24386 653 aa17.08■□□□□ 0.32
VPS33A-205ENST00000541169 PTGS2P35354 604 aa17.08■□□□□ 0.32
VPS33A-205ENST00000541169 EIF1P41567 113 aaKnown RBP17.08■□□□□ 0.32
VPS33A-205ENST00000541169 P2RX1P51575 399 aa17.08■□□□□ 0.32
VPS33A-205ENST00000541169 ZNF41P51814 821 aaPredicted RBP17.08■□□□□ 0.32
VPS33A-205ENST00000541169 CDK6Q00534 326 aa17.08■□□□□ 0.32
VPS33A-205ENST00000541169 CHRNEQ04844 493 aa17.08■□□□□ 0.32
VPS33A-205ENST00000541169 FGFBP1Q14512 234 aa17.08■□□□□ 0.32
VPS33A-205ENST00000541169 CYP51A1Q16850 503 aa17.08■□□□□ 0.32
VPS33A-205ENST00000541169 PDZK1Q5T2W1 519 aa17.08■□□□□ 0.32
VPS33A-205ENST00000541169 INTS11Q5TA45 600 aaKnown RBP17.08■□□□□ 0.32
VPS33A-205ENST00000541169 ERICH5Q6P6B1 374 aa17.08■□□□□ 0.32
VPS33A-205ENST00000541169 NET1Q7Z628 596 aaPredicted RBP17.08■□□□□ 0.32
VPS33A-205ENST00000541169 IFNEQ86WN2 208 aa17.08■□□□□ 0.32
VPS33A-205ENST00000541169 SPPL2CQ8IUH8 684 aa17.08■□□□□ 0.32
VPS33A-205ENST00000541169 ZNF440Q8IYI8 595 aa17.08■□□□□ 0.32
VPS33A-205ENST00000541169 ZNF614Q8N883 585 aa17.08■□□□□ 0.32
VPS33A-205ENST00000541169 FAM83FQ8NEG4 500 aaPredicted RBP17.08■□□□□ 0.32
VPS33A-205ENST00000541169 OR14L1PQ8NHC6 308 aa17.08■□□□□ 0.32
VPS33A-205ENST00000541169 ZBTB8AQ96BR9 441 aa17.08■□□□□ 0.32
VPS33A-205ENST00000541169 RCN3Q96D15 328 aa17.08■□□□□ 0.32
VPS33A-205ENST00000541169 C1GALT1C1Q96EU7 318 aa17.08■□□□□ 0.32
VPS33A-205ENST00000541169 TMEM19Q96HH6 336 aa17.08■□□□□ 0.32
VPS33A-205ENST00000541169 LAT2Q9GZY6 243 aa17.08■□□□□ 0.32
VPS33A-205ENST00000541169 DSN1Q9H410 356 aa17.08■□□□□ 0.32
VPS33A-205ENST00000541169 EVA1AQ9H8M9 152 aa17.08■□□□□ 0.32
VPS33A-205ENST00000541169 EXOSC3Q9NQT5 275 aaKnown RBP17.08■□□□□ 0.32
VPS33A-205ENST00000541169 PRRC2CQ9Y520 2896 aaKnown RBP17.08■□□□□ 0.32
VPS33A-205ENST00000541169 A0A1B0GTH9 108 aa17.07■□□□□ 0.32
VPS33A-205ENST00000541169 A0A1B0GUH1 482 aa17.07■□□□□ 0.32
VPS33A-205ENST00000541169 PRAMEF27A3QJZ7 478 aa17.07■□□□□ 0.32
VPS33A-205ENST00000541169 C7orf72A4D263 438 aa17.07■□□□□ 0.32
VPS33A-205ENST00000541169 FXYD1O00168 92 aa17.07■□□□□ 0.32
VPS33A-205ENST00000541169 SERPINB7O75635 380 aa17.07■□□□□ 0.32
VPS33A-205ENST00000541169 CSTAP01040 98 aa17.07■□□□□ 0.32
VPS33A-205ENST00000541169 STSP08842 583 aa17.07■□□□□ 0.32
VPS33A-205ENST00000541169 NID1P14543 1247 aa17.07■□□□□ 0.32
VPS33A-205ENST00000541169 UQCRBP14927 111 aa17.07■□□□□ 0.32
VPS33A-205ENST00000541169 SLC6A8P48029 635 aa17.07■□□□□ 0.32
VPS33A-205ENST00000541169 KCNJ10P78508 379 aa17.07■□□□□ 0.32
VPS33A-205ENST00000541169 KRT72Q14CN4 511 aa17.07■□□□□ 0.32
VPS33A-205ENST00000541169 LIN52Q52LA3 116 aa17.07■□□□□ 0.32
VPS33A-205ENST00000541169 MTFR2Q6P444 385 aa17.07■□□□□ 0.32
VPS33A-205ENST00000541169 ENPP6Q6UWR7 440 aa17.07■□□□□ 0.32
VPS33A-205ENST00000541169 TREML1Q86YW5 311 aa17.07■□□□□ 0.32
VPS33A-205ENST00000541169 PM20D2Q8IYS1 436 aa17.07■□□□□ 0.32
VPS33A-205ENST00000541169 POU5F2Q8N7G0 328 aa17.07■□□□□ 0.32
VPS33A-205ENST00000541169 HIPK4Q8NE63 616 aa17.07■□□□□ 0.32
VPS33A-205ENST00000541169 WDR60Q8WVS4 1066 aa17.07■□□□□ 0.32
VPS33A-205ENST00000541169 SLC35B4Q969S0 331 aa17.07■□□□□ 0.32
VPS33A-205ENST00000541169 PIGQQ9BRB3 760 aa17.07■□□□□ 0.32
VPS33A-205ENST00000541169 MED11Q9P086 117 aa17.07■□□□□ 0.32
VPS33A-205ENST00000541169 FBXL2Q9UKC9 423 aa17.07■□□□□ 0.32
VPS33A-205ENST00000541169 PRORSD1PA6NEY8 169 aa17.06■□□□□ 0.32
VPS33A-205ENST00000541169 AIM2O14862 343 aa17.06■□□□□ 0.32
VPS33A-205ENST00000541169 DNAJA2O60884 412 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms