RNA–Protein interactions for RNA: ENST00000540906.1

AP003559.1-201, humanhuman

TSL 3 BASIC

Gene AP003559.1, Length 1,831 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003559.1-201ENST00000540906 GPR4P46093 362 aa11.3□□□□□ -0.6
AP003559.1-201ENST00000540906 NUDT6P53370 316 aa11.3□□□□□ -0.6
AP003559.1-201ENST00000540906 ATP12AP54707 1039 aa11.3□□□□□ -0.6
AP003559.1-201ENST00000540906 NUP107P57740 925 aa11.3□□□□□ -0.6
AP003559.1-201ENST00000540906 DCDP81605 110 aaKnown RBP11.3□□□□□ -0.6
AP003559.1-201ENST00000540906 ST3GAL3Q11203 375 aa11.3□□□□□ -0.6
AP003559.1-201ENST00000540906 BIKQ13323 160 aa11.3□□□□□ -0.6
AP003559.1-201ENST00000540906 FGFBP1Q14512 234 aa11.3□□□□□ -0.6
AP003559.1-201ENST00000540906 CD226Q15762 336 aa11.3□□□□□ -0.6
AP003559.1-201ENST00000540906 CCDC157Q569K6 752 aa11.3□□□□□ -0.6
AP003559.1-201ENST00000540906 XAF1Q6GPH4 301 aa11.3□□□□□ -0.6
AP003559.1-201ENST00000540906 OVCH1Q7RTY7 1134 aa11.3□□□□□ -0.6
AP003559.1-201ENST00000540906 APLFQ8IW19 511 aaPredicted RBP11.3□□□□□ -0.6
AP003559.1-201ENST00000540906 SPARTQ8N0X7 666 aa11.3□□□□□ -0.6
AP003559.1-201ENST00000540906 POGLUT1Q8NBL1 392 aa11.3□□□□□ -0.6
AP003559.1-201ENST00000540906 PFN4Q8NHR9 129 aa11.3□□□□□ -0.6
AP003559.1-201ENST00000540906 RHOXF1Q8NHV9 184 aa11.3□□□□□ -0.6
AP003559.1-201ENST00000540906 SLC38A4Q969I6 547 aa11.3□□□□□ -0.6
AP003559.1-201ENST00000540906 ZNF566Q969W8 418 aa11.3□□□□□ -0.6
AP003559.1-201ENST00000540906 SPSB2Q99619 263 aa11.3□□□□□ -0.6
AP003559.1-201ENST00000540906 EGLN3Q9H6Z9 239 aa11.3□□□□□ -0.6
AP003559.1-201ENST00000540906 POLR1BQ9H9Y6 1135 aa11.3□□□□□ -0.6
AP003559.1-201ENST00000540906 AMBNQ9NP70 447 aa11.3□□□□□ -0.6
AP003559.1-201ENST00000540906 TUBA8Q9NY65 449 aaPredicted RBP11.3□□□□□ -0.6
AP003559.1-201ENST00000540906 PCDHGA5Q9Y5G8 931 aa11.3□□□□□ -0.6
AP003559.1-201ENST00000540906 CEPT1Q9Y6K0 416 aa11.3□□□□□ -0.6
AP003559.1-201ENST00000540906 HSPE1-MOB4S4R3N1 261 aa11.3□□□□□ -0.6
AP003559.1-201ENST00000540906 ZNF318Q5VUA4 2279 aa11.3□□□□□ -0.6
AP003559.1-201ENST00000540906 KLF4O43474 513 aa11.3□□□□□ -0.6
AP003559.1-201ENST00000540906 ZNF354AO60765 605 aaPredicted RBP11.3□□□□□ -0.6
AP003559.1-201ENST00000540906 ONECUT2O95948 504 aa11.3□□□□□ -0.6
AP003559.1-201ENST00000540906 ITIH1P19827 911 aa11.3□□□□□ -0.6
AP003559.1-201ENST00000540906 ETV5P41161 510 aa11.3□□□□□ -0.6
AP003559.1-201ENST00000540906 ILKQ13418 452 aa11.3□□□□□ -0.6
AP003559.1-201ENST00000540906 NEDD8Q15843 81 aa11.3□□□□□ -0.6
AP003559.1-201ENST00000540906 DECR1Q16698 335 aa11.3□□□□□ -0.6
AP003559.1-201ENST00000540906 CPEB4Q17RY0 729 aaKnown RBP eCLIP11.3□□□□□ -0.6
AP003559.1-201ENST00000540906 CNPY1Q3B7I2 92 aa11.3□□□□□ -0.6
AP003559.1-201ENST00000540906 ZNF730Q6ZMV8 503 aa11.3□□□□□ -0.6
AP003559.1-201ENST00000540906 SLCO6A1Q86UG4 719 aa11.3□□□□□ -0.6
AP003559.1-201ENST00000540906 NRMQ8IXM6 262 aa11.3□□□□□ -0.6
AP003559.1-201ENST00000540906 ZNF441Q8N8Z8 693 aa11.3□□□□□ -0.6
AP003559.1-201ENST00000540906 NFAM1Q8NET5 270 aaPredicted RBP11.3□□□□□ -0.6
AP003559.1-201ENST00000540906 OR1N1Q8NGS0 311 aa11.3□□□□□ -0.6
AP003559.1-201ENST00000540906 OR14A16Q8NHC5 309 aa11.3□□□□□ -0.6
AP003559.1-201ENST00000540906 GRHL3Q8TE85 626 aa11.3□□□□□ -0.6
AP003559.1-201ENST00000540906 ACOT11Q8WXI4 607 aaPredicted RBP11.3□□□□□ -0.6
AP003559.1-201ENST00000540906 C8orf44Q96CB5 159 aa11.3□□□□□ -0.6
AP003559.1-201ENST00000540906 WDR77Q9BQA1 342 aaPredicted RBP11.3□□□□□ -0.6
AP003559.1-201ENST00000540906 WWTR1Q9GZV5 400 aa11.3□□□□□ -0.6
AP003559.1-201ENST00000540906 CACYBPQ9HB71 228 aaKnown RBP11.3□□□□□ -0.6
AP003559.1-201ENST00000540906 C20orf141Q9NUB4 165 aa11.3□□□□□ -0.6
AP003559.1-201ENST00000540906 PCDHGB2Q9Y5G2 931 aa11.3□□□□□ -0.6
AP003559.1-201ENST00000540906 TRAPPC13A5PLN9 417 aa11.29□□□□□ -0.6
AP003559.1-201ENST00000540906 FRG2CA6NGY1 282 aa11.29□□□□□ -0.6
AP003559.1-201ENST00000540906 H3BN98 237 aa11.29□□□□□ -0.6
AP003559.1-201ENST00000540906 MEN1O00255 615 aa11.29□□□□□ -0.6
AP003559.1-201ENST00000540906 CDC42EP2O14613 210 aa11.29□□□□□ -0.6
AP003559.1-201ENST00000540906 ALOX12BO75342 701 aa11.29□□□□□ -0.6
AP003559.1-201ENST00000540906 RFPL3O75679 317 aa11.29□□□□□ -0.6
AP003559.1-201ENST00000540906 IL33O95760 270 aa11.29□□□□□ -0.6
AP003559.1-201ENST00000540906 HEXBP07686 556 aa11.29□□□□□ -0.6
AP003559.1-201ENST00000540906 CCDC159P0C7I6 412 aa11.29□□□□□ -0.6
AP003559.1-201ENST00000540906 MAP2K4P45985 399 aa11.29□□□□□ -0.6
AP003559.1-201ENST00000540906 NR0B1P51843 470 aaKnown RBP11.29□□□□□ -0.6
AP003559.1-201ENST00000540906 GABARAPL2P60520 117 aa11.29□□□□□ -0.6
AP003559.1-201ENST00000540906 ESRRGP62508 458 aa11.29□□□□□ -0.6
AP003559.1-201ENST00000540906 SLC35A2P78381 396 aa11.29□□□□□ -0.6
AP003559.1-201ENST00000540906 MVKQ03426 396 aa11.29□□□□□ -0.6
AP003559.1-201ENST00000540906 OCA2Q04671 838 aa11.29□□□□□ -0.6
AP003559.1-201ENST00000540906 CLPPQ16740 277 aaPredicted RBP11.29□□□□□ -0.6
AP003559.1-201ENST00000540906 KLHL26Q53HC5 615 aa11.29□□□□□ -0.6
AP003559.1-201ENST00000540906 FNDC7Q5VTL7 733 aa11.29□□□□□ -0.6
AP003559.1-201ENST00000540906 SLX4IPQ5VYV7 408 aa11.29□□□□□ -0.6
AP003559.1-201ENST00000540906 C12orf73Q69YU5 71 aa11.29□□□□□ -0.6
AP003559.1-201ENST00000540906 ACSM5Q6NUN0 579 aa11.29□□□□□ -0.6
AP003559.1-201ENST00000540906 CD300LDQ6UXZ3 194 aa11.29□□□□□ -0.6
AP003559.1-201ENST00000540906 BCDIN3DQ7Z5W3 292 aaKnown RBP11.29□□□□□ -0.6
AP003559.1-201ENST00000540906 RANBP3LQ86VV4 465 aaPredicted RBP11.29□□□□□ -0.6
AP003559.1-201ENST00000540906 GRAMD2AQ8IUY3 354 aa11.29□□□□□ -0.6
AP003559.1-201ENST00000540906 P3H2Q8IVL5 708 aa11.29□□□□□ -0.6
AP003559.1-201ENST00000540906 CACTIN-AS1Q8N1I8 211 aa11.29□□□□□ -0.6
AP003559.1-201ENST00000540906 LCORQ96JN0 433 aaPredicted RBP11.29□□□□□ -0.6
AP003559.1-201ENST00000540906 FAM192AQ9GZU8 254 aa11.29□□□□□ -0.6
AP003559.1-201ENST00000540906 DUSP21Q9H596 190 aa11.29□□□□□ -0.6
AP003559.1-201ENST00000540906 ATP13A2Q9NQ11 1180 aa11.29□□□□□ -0.6
AP003559.1-201ENST00000540906 C2orf92A0A1B0GVN3 265 aa11.28□□□□□ -0.6
AP003559.1-201ENST00000540906 A0A1B0GWA3 101 aa11.28□□□□□ -0.6
AP003559.1-201ENST00000540906 SERINC4A6NH21 518 aa11.28□□□□□ -0.6
AP003559.1-201ENST00000540906 KPNA4O00629 521 aaPredicted RBP11.28□□□□□ -0.6
AP003559.1-201ENST00000540906 POLR1CO15160 346 aaPredicted RBP11.28□□□□□ -0.6
AP003559.1-201ENST00000540906 FLRT2O43155 660 aa11.28□□□□□ -0.6
AP003559.1-201ENST00000540906 MAN1A2O60476 641 aa11.28□□□□□ -0.6
AP003559.1-201ENST00000540906 FAM20BO75063 409 aa11.28□□□□□ -0.6
AP003559.1-201ENST00000540906 ICOSLGO75144 302 aa11.28□□□□□ -0.6
AP003559.1-201ENST00000540906 UTS2O95399 124 aa11.28□□□□□ -0.6
AP003559.1-201ENST00000540906 MT-ND2P03891 347 aa11.28□□□□□ -0.6
AP003559.1-201ENST00000540906 PCMT1P22061 227 aa11.28□□□□□ -0.6
AP003559.1-201ENST00000540906 MASP1P48740 699 aa11.28□□□□□ -0.6
AP003559.1-201ENST00000540906 RPS6KA3P51812 740 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms