RNA–Protein interactions for RNA: ENST00000540798.5

RTN3-210, Transcript of reticulon 3, humanhuman

TSL 1 (best) BASIC

Gene RTN3, Length 3,124 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-210ENST00000540798 CRYBB2P43320 205 aa12.77□□□□□ -0.37
RTN3-210ENST00000540798 PGGHGQ32M88 737 aa12.77□□□□□ -0.37
RTN3-210ENST00000540798 FLYWCH1Q4VC44 716 aa12.77□□□□□ -0.37
RTN3-210ENST00000540798 FIGNL1Q6PIW4 674 aa12.77□□□□□ -0.37
RTN3-210ENST00000540798 PAQR6Q6TCH4 344 aa12.77□□□□□ -0.37
RTN3-210ENST00000540798 C1orf216Q8TAB5 229 aa12.77□□□□□ -0.37
RTN3-210ENST00000540798 VSTM2LQ96N03 204 aa12.77□□□□□ -0.37
RTN3-210ENST00000540798 SLC7A5P2Q9GIP4 190 aa12.77□□□□□ -0.37
RTN3-210ENST00000540798 RAB33BQ9H082 229 aa12.77□□□□□ -0.37
RTN3-210ENST00000540798 FOLH1BQ9HBA9 442 aa12.77□□□□□ -0.37
RTN3-210ENST00000540798 ISYNA1Q9NPH2 558 aa12.77□□□□□ -0.37
RTN3-210ENST00000540798 KRCC1Q9NPI7 259 aaPredicted RBP12.77□□□□□ -0.37
RTN3-210ENST00000540798 TMEM129A0AVI4 362 aa12.77□□□□□ -0.37
RTN3-210ENST00000540798 FITM1A5D6W6 292 aa12.77□□□□□ -0.37
RTN3-210ENST00000540798 SNTNA6NMZ2 147 aa12.77□□□□□ -0.37
RTN3-210ENST00000540798 PRKCDQ05655 676 aa12.77□□□□□ -0.37
RTN3-210ENST00000540798 ZNF155Q12901 538 aaPredicted RBP12.77□□□□□ -0.37
RTN3-210ENST00000540798 TMEM44Q2T9K0 475 aa12.77□□□□□ -0.37
RTN3-210ENST00000540798 GARNL3Q5VVW2 1013 aa12.77□□□□□ -0.37
RTN3-210ENST00000540798 CYP4Z2PQ8N1L4 340 aa12.77□□□□□ -0.37
RTN3-210ENST00000540798 LMX1AQ8TE12 382 aa12.77□□□□□ -0.37
RTN3-210ENST00000540798 RNFT2Q96EX2 444 aa12.77□□□□□ -0.37
RTN3-210ENST00000540798 MROQ9BYG7 248 aa12.77□□□□□ -0.37
RTN3-210ENST00000540798 SEC14L4Q9UDX3 406 aa12.77□□□□□ -0.37
RTN3-210ENST00000540798 NPIPA5A0A0B4J1W7 369 aa12.76□□□□□ -0.37
RTN3-210ENST00000540798 NPIPA7E9PJI5 369 aa12.76□□□□□ -0.37
RTN3-210ENST00000540798 TAF4O00268 1085 aa12.76□□□□□ -0.37
RTN3-210ENST00000540798 CBFA2T3O75081 653 aa12.76□□□□□ -0.37
RTN3-210ENST00000540798 GKN3PP0CG01 181 aa12.76□□□□□ -0.37
RTN3-210ENST00000540798 NPIPA8P0DM63 369 aa12.76□□□□□ -0.37
RTN3-210ENST00000540798 CD40LGP29965 261 aa12.76□□□□□ -0.37
RTN3-210ENST00000540798 SOX3P41225 446 aa12.76□□□□□ -0.37
RTN3-210ENST00000540798 EIF2B2P49770 351 aaKnown RBP12.76□□□□□ -0.37
RTN3-210ENST00000540798 FXYD6P3P58550 94 aa12.76□□□□□ -0.37
RTN3-210ENST00000540798 SKP1P63208 163 aa12.76□□□□□ -0.37
RTN3-210ENST00000540798 OXA1LQ15070 435 aa12.76□□□□□ -0.37
RTN3-210ENST00000540798 VASH1Q7L8A9 365 aaPredicted RBP12.76□□□□□ -0.37
RTN3-210ENST00000540798 ZNF485Q8NCK3 441 aa12.76□□□□□ -0.37
RTN3-210ENST00000540798 OR6C4Q8NGE1 309 aa12.76□□□□□ -0.37
RTN3-210ENST00000540798 SIAEQ9HAT2 523 aa12.76□□□□□ -0.37
RTN3-210ENST00000540798 C14orf105Q9NVL8 296 aa12.76□□□□□ -0.37
RTN3-210ENST00000540798 GPR52Q9Y2T5 361 aa12.76□□□□□ -0.37
RTN3-210ENST00000540798 OR10H2O60403 315 aa12.76□□□□□ -0.37
RTN3-210ENST00000540798 ZGLP1P0C6A0 271 aa12.76□□□□□ -0.37
RTN3-210ENST00000540798 CPEP16870 476 aa12.76□□□□□ -0.37
RTN3-210ENST00000540798 MTNR1AP48039 350 aa12.76□□□□□ -0.37
RTN3-210ENST00000540798 PPP5CP53041 499 aa12.76□□□□□ -0.37
RTN3-210ENST00000540798 STARD6P59095 220 aa12.76□□□□□ -0.37
RTN3-210ENST00000540798 BNC1Q01954 994 aa12.76□□□□□ -0.37
RTN3-210ENST00000540798 SLC30A6Q6NXT4 461 aa12.76□□□□□ -0.37
RTN3-210ENST00000540798 ZNF613Q6PF04 617 aa12.76□□□□□ -0.37
RTN3-210ENST00000540798 JAM3Q9BX67 310 aa12.76□□□□□ -0.37
RTN3-210ENST00000540798 HCN3Q9P1Z3 774 aa12.76□□□□□ -0.37
RTN3-210ENST00000540798 STUB1Q9UNE7 303 aa12.76□□□□□ -0.37
RTN3-210ENST00000540798 PLCL2Q9UPR0 1127 aa12.76□□□□□ -0.37
RTN3-210ENST00000540798 EXOGQ9Y2C4 368 aaKnown RBP12.76□□□□□ -0.37
RTN3-210ENST00000540798 EML5Q05BV3 1969 aa12.76□□□□□ -0.37
RTN3-210ENST00000540798 A8MU76 341 aa12.75□□□□□ -0.37
RTN3-210ENST00000540798 MYL12BO14950 172 aa12.75□□□□□ -0.37
RTN3-210ENST00000540798 IGKV1D-16P01601 117 aa12.75□□□□□ -0.37
RTN3-210ENST00000540798 TBXA2RP21731 343 aa12.75□□□□□ -0.37
RTN3-210ENST00000540798 ETV6P41212 452 aa12.75□□□□□ -0.37
RTN3-210ENST00000540798 CTBP2P56545 445 aa12.75□□□□□ -0.37
RTN3-210ENST00000540798 LRIT3Q3SXY7 679 aa12.75□□□□□ -0.37
RTN3-210ENST00000540798 CLEC12AQ5QGZ9 265 aa12.75□□□□□ -0.37
RTN3-210ENST00000540798 PHC2Q8IXK0 858 aa12.75□□□□□ -0.37
RTN3-210ENST00000540798 DEFB119Q8N690 84 aa12.75□□□□□ -0.37
RTN3-210ENST00000540798 TMEM239Q8WW34 195 aa12.75□□□□□ -0.37
RTN3-210ENST00000540798 ZNF559Q9BR84 538 aa12.75□□□□□ -0.37
RTN3-210ENST00000540798 CFL2Q9Y281 166 aa12.75□□□□□ -0.37
RTN3-210ENST00000540798 NPIPB9F8W1W9 429 aa12.75□□□□□ -0.37
RTN3-210ENST00000540798 GPR3P46089 330 aa12.75□□□□□ -0.37
RTN3-210ENST00000540798 NXPH1P58417 271 aa12.75□□□□□ -0.37
RTN3-210ENST00000540798 C1DQ13901 141 aaKnown RBP12.75□□□□□ -0.37
RTN3-210ENST00000540798 BCL2A1Q16548 175 aa12.75□□□□□ -0.37
RTN3-210ENST00000540798 TMPRSS11FQ6ZWK6 438 aa12.75□□□□□ -0.37
RTN3-210ENST00000540798 OR2T33Q8NG76 320 aa12.75□□□□□ -0.37
RTN3-210ENST00000540798 RIT1Q92963 219 aa12.75□□□□□ -0.37
RTN3-210ENST00000540798 ZNF649Q9BS31 505 aa12.75□□□□□ -0.37
RTN3-210ENST00000540798 ZNF426Q9BUY5 554 aa12.75□□□□□ -0.37
RTN3-210ENST00000540798 EPHA6Q9UF33 1036 aa12.75□□□□□ -0.37
RTN3-210ENST00000540798 MRPS33Q9Y291 106 aaKnown RBP12.75□□□□□ -0.37
RTN3-210ENST00000540798 EXOSC1Q9Y3B2 195 aaKnown RBP12.75□□□□□ -0.37
RTN3-210ENST00000540798 TLCD2A6NGC4 264 aa12.75□□□□□ -0.37
RTN3-210ENST00000540798 UNC119BA6NIH7 251 aa12.75□□□□□ -0.37
RTN3-210ENST00000540798 LMO7DNF2Z398 122 aa12.75□□□□□ -0.37
RTN3-210ENST00000540798 STK25O00506 426 aa12.75□□□□□ -0.37
RTN3-210ENST00000540798 MAKP20794 623 aa12.75□□□□□ -0.37
RTN3-210ENST00000540798 GALNSP34059 522 aa12.75□□□□□ -0.37
RTN3-210ENST00000540798 FNTBP49356 437 aa12.75□□□□□ -0.37
RTN3-210ENST00000540798 WNT4P56705 351 aa12.75□□□□□ -0.37
RTN3-210ENST00000540798 RPS3AP61247 264 aaKnown RBP12.75□□□□□ -0.37
RTN3-210ENST00000540798 SRSF5Q13243 272 aaKnown RBP12.75□□□□□ -0.37
RTN3-210ENST00000540798 ZNF141Q15928 474 aa12.75□□□□□ -0.37
RTN3-210ENST00000540798 NPSR1Q6W5P4 371 aa12.75□□□□□ -0.37
RTN3-210ENST00000540798 RFKQ969G6 155 aa12.75□□□□□ -0.37
RTN3-210ENST00000540798 TRMT61AQ96FX7 289 aaKnown RBP12.75□□□□□ -0.37
RTN3-210ENST00000540798 PEX11GQ96HA9 241 aa12.75□□□□□ -0.37
RTN3-210ENST00000540798 ZNF578Q96N58 590 aaPredicted RBP12.75□□□□□ -0.37
RTN3-210ENST00000540798 SLC38A3Q99624 504 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms