RNA–Protein interactions for RNA: ENST00000540747.1

YBX3-209, Transcript of Y-box binding protein 3, humanhuman

TSL 5

Gene YBX3, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-209ENST00000540747 SERTM1A2A2V5 107 aa6.49□□□□□ -1.37
YBX3-209ENST00000540747 DPRXA6NFQ7 191 aa6.49□□□□□ -1.37
YBX3-209ENST00000540747 ELOA3DA6NLF2 546 aaPredicted RBP6.49□□□□□ -1.37
YBX3-209ENST00000540747 SHISA9B4DS77 424 aa6.49□□□□□ -1.37
YBX3-209ENST00000540747 GPRIN2O60269 458 aa6.49□□□□□ -1.37
YBX3-209ENST00000540747 SMIM24O75264 130 aa6.49□□□□□ -1.37
YBX3-209ENST00000540747 TP53P04637 393 aaPredicted RBP6.49□□□□□ -1.37
YBX3-209ENST00000540747 COL6A2P12110 1019 aa6.49□□□□□ -1.37
YBX3-209ENST00000540747 DDCP20711 480 aa6.49□□□□□ -1.37
YBX3-209ENST00000540747 SHC1P29353 583 aa6.49□□□□□ -1.37
YBX3-209ENST00000540747 MPIP34949 423 aa6.49□□□□□ -1.37
YBX3-209ENST00000540747 ARL1P40616 181 aaPredicted RBP6.49□□□□□ -1.37
YBX3-209ENST00000540747 GSTM5P46439 218 aa6.49□□□□□ -1.37
YBX3-209ENST00000540747 CTBP2P56545 445 aa6.49□□□□□ -1.37
YBX3-209ENST00000540747 RAC1P63000 192 aa6.49□□□□□ -1.37
YBX3-209ENST00000540747 VLDLRP98155 873 aa6.49□□□□□ -1.37
YBX3-209ENST00000540747 CLCQ05315 142 aa6.49□□□□□ -1.37
YBX3-209ENST00000540747 C17orf67Q0P5P2 114 aa6.49□□□□□ -1.37
YBX3-209ENST00000540747 HEPACAMQ14CZ8 416 aa6.49□□□□□ -1.37
YBX3-209ENST00000540747 TSC22D1Q15714 1073 aa6.49□□□□□ -1.37
YBX3-209ENST00000540747 SGCBQ16585 318 aa6.49□□□□□ -1.37
YBX3-209ENST00000540747 ZNF239Q16600 458 aaKnown RBP6.49□□□□□ -1.37
YBX3-209ENST00000540747 DECR1Q16698 335 aa6.49□□□□□ -1.37
YBX3-209ENST00000540747 TSNAXIP1Q2TAA8 658 aa6.49□□□□□ -1.37
YBX3-209ENST00000540747 KRT71Q3SY84 523 aa6.49□□□□□ -1.37
YBX3-209ENST00000540747 ELOA3BQ3SY89 546 aa6.49□□□□□ -1.37
YBX3-209ENST00000540747 UNC50Q53HI1 259 aa6.49□□□□□ -1.37
YBX3-209ENST00000540747 SPIN4Q56A73 249 aa6.49□□□□□ -1.37
YBX3-209ENST00000540747 SFRP5Q5T4F7 317 aa6.49□□□□□ -1.37
YBX3-209ENST00000540747 FAM71E1Q6IPT2 247 aa6.49□□□□□ -1.37
YBX3-209ENST00000540747 C11orf71Q6IPW1 123 aa6.49□□□□□ -1.37
YBX3-209ENST00000540747 FIGNL1Q6PIW4 674 aa6.49□□□□□ -1.37
YBX3-209ENST00000540747 TMEM107Q6UX40 140 aa6.49□□□□□ -1.37
YBX3-209ENST00000540747 ESPNLQ6ZVH7 1005 aa6.49□□□□□ -1.37
YBX3-209ENST00000540747 NUFIP2Q7Z417 695 aaKnown RBP6.49□□□□□ -1.37
YBX3-209ENST00000540747 CCDC25Q86WR0 208 aa6.49□□□□□ -1.37
YBX3-209ENST00000540747 RELL1Q8IUW5 271 aa6.49□□□□□ -1.37
YBX3-209ENST00000540747 WDR75Q8IWA0 830 aaKnown RBP6.49□□□□□ -1.37
YBX3-209ENST00000540747 CDYL2Q8N8U2 506 aa6.49□□□□□ -1.37
YBX3-209ENST00000540747 KBTBD8Q8NFY9 601 aa6.49□□□□□ -1.37
YBX3-209ENST00000540747 ELOA3Q8NG57 546 aa6.49□□□□□ -1.37
YBX3-209ENST00000540747 FAM110BQ8TC76 370 aa6.49□□□□□ -1.37
YBX3-209ENST00000540747 ACTRT2Q8TDY3 377 aa6.49□□□□□ -1.37
YBX3-209ENST00000540747 ELP4Q96EB1 424 aa6.49□□□□□ -1.37
YBX3-209ENST00000540747 AMDHD1Q96NU7 426 aa6.49□□□□□ -1.37
YBX3-209ENST00000540747 FMO2Q99518 471 aa6.49□□□□□ -1.37
YBX3-209ENST00000540747 HDHD5Q9BXW7 423 aa6.49□□□□□ -1.37
YBX3-209ENST00000540747 MRPL46Q9H2W6 279 aaKnown RBP6.49□□□□□ -1.37
YBX3-209ENST00000540747 GLIPR2Q9H4G4 154 aa6.49□□□□□ -1.37
YBX3-209ENST00000540747 GP6Q9HCN6 339 aa6.49□□□□□ -1.37
YBX3-209ENST00000540747 Q9N2J8 555 aa6.49□□□□□ -1.37
YBX3-209ENST00000540747 FANCFQ9NPI8 374 aa6.49□□□□□ -1.37
YBX3-209ENST00000540747 PFDN4Q9NQP4 134 aa6.49□□□□□ -1.37
YBX3-209ENST00000540747 GIMAP4Q9NUV9 329 aa6.49□□□□□ -1.37
YBX3-209ENST00000540747 MED17Q9NVC6 651 aa6.49□□□□□ -1.37
YBX3-209ENST00000540747 NTMQ9P121 344 aa6.49□□□□□ -1.37
YBX3-209ENST00000540747 GDF2Q9UK05 429 aaPredicted RBP6.49□□□□□ -1.37
YBX3-209ENST00000540747 ING1Q9UK53 422 aaPredicted RBP6.49□□□□□ -1.37
YBX3-209ENST00000540747 MCTS1Q9ULC4 181 aaKnown RBP6.49□□□□□ -1.37
YBX3-209ENST00000540747 VDAC3Q9Y277 283 aa6.49□□□□□ -1.37
YBX3-209ENST00000540747 YLPM1P49750 1951 aaKnown RBP6.48□□□□□ -1.37
YBX3-209ENST00000540747 GIMAP1-GIMAP5A0A087WTJ2 511 aa6.48□□□□□ -1.37
YBX3-209ENST00000540747 GNG14A0A1W2PPG7 69 aa6.48□□□□□ -1.37
YBX3-209ENST00000540747 TLDC2A0PJX2 215 aa6.48□□□□□ -1.37
YBX3-209ENST00000540747 GMNCA6NCL1 334 aa6.48□□□□□ -1.37
YBX3-209ENST00000540747 TTC36A6NLP5 189 aa6.48□□□□□ -1.37
YBX3-209ENST00000540747 ZNF814B7Z6K7 855 aa6.48□□□□□ -1.37
YBX3-209ENST00000540747 TNFSF11O14788 317 aa6.48□□□□□ -1.37
YBX3-209ENST00000540747 CLOCKO15516 846 aa6.48□□□□□ -1.37
YBX3-209ENST00000540747 EFNA2O43921 213 aa6.48□□□□□ -1.37
YBX3-209ENST00000540747 NKX2-2O95096 273 aa6.48□□□□□ -1.37
YBX3-209ENST00000540747 ESRRBO95718 433 aa6.48□□□□□ -1.37
YBX3-209ENST00000540747 OXSR1O95747 527 aaPredicted RBP6.48□□□□□ -1.37
YBX3-209ENST00000540747 PLGP00747 810 aaPredicted RBP6.48□□□□□ -1.37
YBX3-209ENST00000540747 KRT6AP02538 564 aa6.48□□□□□ -1.37
YBX3-209ENST00000540747 KRT6BP04259 564 aa6.48□□□□□ -1.37
YBX3-209ENST00000540747 JUNP05412 331 aaKnown RBP6.48□□□□□ -1.37
YBX3-209ENST00000540747 CD3EP07766 207 aa6.48□□□□□ -1.37
YBX3-209ENST00000540747 LINGO3P0C6S8 592 aa6.48□□□□□ -1.37
YBX3-209ENST00000540747 ECHS1P30084 290 aa6.48□□□□□ -1.37
YBX3-209ENST00000540747 LSP1P33241 339 aa6.48□□□□□ -1.37
YBX3-209ENST00000540747 KRT6CP48668 564 aa6.48□□□□□ -1.37
YBX3-209ENST00000540747 NCBP2P52298 156 aaKnown RBP eCLIP6.48□□□□□ -1.37
YBX3-209ENST00000540747 MANFP55145 182 aaKnown RBP6.48□□□□□ -1.37
YBX3-209ENST00000540747 GUCY1A3Q02108 690 aa6.48□□□□□ -1.37
YBX3-209ENST00000540747 BSPH1Q075Z2 132 aa6.48□□□□□ -1.37
YBX3-209ENST00000540747 LOXL1Q08397 574 aaPredicted RBP6.48□□□□□ -1.37
YBX3-209ENST00000540747 ACSM2AQ08AH3 577 aa6.48□□□□□ -1.37
YBX3-209ENST00000540747 ZNF763Q0D2J5 394 aa6.48□□□□□ -1.37
YBX3-209ENST00000540747 P2RY6Q15077 328 aa6.48□□□□□ -1.37
YBX3-209ENST00000540747 RASA2Q15283 850 aa6.48□□□□□ -1.37
YBX3-209ENST00000540747 UAP1Q16222 522 aaPredicted RBP6.48□□□□□ -1.37
YBX3-209ENST00000540747 TMEM249Q2WGJ8 235 aa6.48□□□□□ -1.37
YBX3-209ENST00000540747 SH2D4BQ5SQS7 431 aa6.48□□□□□ -1.37
YBX3-209ENST00000540747 ZNF678Q5SXM1 525 aa6.48□□□□□ -1.37
YBX3-209ENST00000540747 CPTPQ5TA50 214 aa6.48□□□□□ -1.37
YBX3-209ENST00000540747 ACSM2BQ68CK6 577 aa6.48□□□□□ -1.37
YBX3-209ENST00000540747 ZAR1Q86SH2 424 aa6.48□□□□□ -1.37
YBX3-209ENST00000540747 STK32CQ86UX6 486 aa6.48□□□□□ -1.37
YBX3-209ENST00000540747 TRABD2AQ86V40 505 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms