RNA–Protein interactions for RNA: ENST00000540539.5

CLIP1-214, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2 BASIC

Gene CLIP1, Length 2,592 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-214ENST00000540539 OR9A1PQ8NGU1 263 aa8.86□□□□□ -0.99
CLIP1-214ENST00000540539 SP7Q8TDD2 431 aaPredicted RBP8.86□□□□□ -0.99
CLIP1-214ENST00000540539 HSH2DQ96JZ2 352 aa8.86□□□□□ -0.99
CLIP1-214ENST00000540539 PCYT2Q99447 389 aa8.86□□□□□ -0.99
CLIP1-214ENST00000540539 EGFL8Q99944 293 aa8.86□□□□□ -0.99
CLIP1-214ENST00000540539 NIPSNAP1Q9BPW8 284 aa8.86□□□□□ -0.99
CLIP1-214ENST00000540539 IFT27Q9BW83 186 aa8.86□□□□□ -0.99
CLIP1-214ENST00000540539 WDR26Q9H7D7 661 aa8.86□□□□□ -0.99
CLIP1-214ENST00000540539 HMX1Q9NP08 348 aaPredicted RBP8.86□□□□□ -0.99
CLIP1-214ENST00000540539 RBM22Q9NW64 420 aaKnown RBP eCLIP8.86□□□□□ -0.99
CLIP1-214ENST00000540539 SF3B6Q9Y3B4 125 aaKnown RBP8.86□□□□□ -0.99
CLIP1-214ENST00000540539 TRBV5-3A0A0A0MS03 114 aa8.85□□□□□ -0.99
CLIP1-214ENST00000540539 hCG_1809904A0A1W2PP81 198 aa8.85□□□□□ -0.99
CLIP1-214ENST00000540539 A0A1W2PR64 198 aa8.85□□□□□ -0.99
CLIP1-214ENST00000540539 A0A1W2PRB8 838 aa8.85□□□□□ -0.99
CLIP1-214ENST00000540539 A0A1W2PRV1 198 aa8.85□□□□□ -0.99
CLIP1-214ENST00000540539 DUXAA6NLW8 204 aa8.85□□□□□ -0.99
CLIP1-214ENST00000540539 NSA2O95478 260 aaKnown RBP8.85□□□□□ -0.99
CLIP1-214ENST00000540539 SOD1P00441 154 aa8.85□□□□□ -0.99
CLIP1-214ENST00000540539 EIF4EP06730 217 aaKnown RBP8.85□□□□□ -0.99
CLIP1-214ENST00000540539 ASGR1P07306 291 aa8.85□□□□□ -0.99
CLIP1-214ENST00000540539 MMP3P08254 477 aa8.85□□□□□ -0.99
CLIP1-214ENST00000540539 QDPRP09417 244 aa8.85□□□□□ -0.99
CLIP1-214ENST00000540539 INSRRP14616 1297 aa8.85□□□□□ -0.99
CLIP1-214ENST00000540539 GOT1P17174 413 aa8.85□□□□□ -0.99
CLIP1-214ENST00000540539 CPT2P23786 658 aa8.85□□□□□ -0.99
CLIP1-214ENST00000540539 GDNFP39905 211 aa8.85□□□□□ -0.99
CLIP1-214ENST00000540539 PITPNBP48739 271 aa8.85□□□□□ -0.99
CLIP1-214ENST00000540539 DIO1P49895 249 aa8.85□□□□□ -0.99
CLIP1-214ENST00000540539 F2RL1P55085 397 aa8.85□□□□□ -0.99
CLIP1-214ENST00000540539 SOX10P56693 466 aa8.85□□□□□ -0.99
CLIP1-214ENST00000540539 CDC42P60953 191 aa8.85□□□□□ -0.99
CLIP1-214ENST00000540539 CXADRP78310 365 aa8.85□□□□□ -0.99
CLIP1-214ENST00000540539 HGFACQ04756 655 aa8.85□□□□□ -0.99
CLIP1-214ENST00000540539 TWF1Q12792 350 aa8.85□□□□□ -0.99
CLIP1-214ENST00000540539 KCNA10Q16322 511 aa8.85□□□□□ -0.99
CLIP1-214ENST00000540539 SLC5A12Q1EHB4 618 aa8.85□□□□□ -0.99
CLIP1-214ENST00000540539 DNLZQ5SXM8 178 aa8.85□□□□□ -0.99
CLIP1-214ENST00000540539 DMRTA1Q5VZB9 504 aa8.85□□□□□ -0.99
CLIP1-214ENST00000540539 ZNF385CQ66K41 422 aaPredicted RBP8.85□□□□□ -0.99
CLIP1-214ENST00000540539 PTCHD4Q6ZW05 846 aa8.85□□□□□ -0.99
CLIP1-214ENST00000540539 TP53INP2Q8IXH6 220 aa8.85□□□□□ -0.99
CLIP1-214ENST00000540539 TEX19Q8NA77 164 aa8.85□□□□□ -0.99
CLIP1-214ENST00000540539 DBF4BQ8NFT6 615 aa8.85□□□□□ -0.99
CLIP1-214ENST00000540539 OR11G2Q8NGC1 345 aa8.85□□□□□ -0.99
CLIP1-214ENST00000540539 OR10D4PQ8NGN7 298 aa8.85□□□□□ -0.99
CLIP1-214ENST00000540539 PIH1D2Q8WWB5 315 aa8.85□□□□□ -0.99
CLIP1-214ENST00000540539 C22orf15Q8WYQ4 148 aa8.85□□□□□ -0.99
CLIP1-214ENST00000540539 SCLYQ96I15 445 aa8.85□□□□□ -0.99
CLIP1-214ENST00000540539 CCDC86Q9H6F5 360 aaKnown RBP8.85□□□□□ -0.99
CLIP1-214ENST00000540539 TMEM231Q9H6L2 316 aa8.85□□□□□ -0.99
CLIP1-214ENST00000540539 MED17Q9NVC6 651 aa8.85□□□□□ -0.99
CLIP1-214ENST00000540539 OPN4Q9UHM6 478 aa8.85□□□□□ -0.99
CLIP1-214ENST00000540539 MOKQ9UQ07 419 aa8.85□□□□□ -0.99
CLIP1-214ENST00000540539 SLC35A3Q9Y2D2 325 aa8.85□□□□□ -0.99
CLIP1-214ENST00000540539 GSTK1Q9Y2Q3 226 aa8.85□□□□□ -0.99
CLIP1-214ENST00000540539 Q9Y3F1 56 aa8.85□□□□□ -0.99
CLIP1-214ENST00000540539 BRCA2P51587 3418 aa8.85□□□□□ -0.99
CLIP1-214ENST00000540539 A0A1B0GUH1 482 aa8.85□□□□□ -0.99
CLIP1-214ENST00000540539 MCIDASD6RGH6 385 aa8.85□□□□□ -0.99
CLIP1-214ENST00000540539 TNFRSF10BO14763 440 aa8.85□□□□□ -0.99
CLIP1-214ENST00000540539 SLC28A2O43868 658 aa8.85□□□□□ -0.99
CLIP1-214ENST00000540539 SC5DO75845 299 aa8.85□□□□□ -0.99
CLIP1-214ENST00000540539 WNT1P04628 370 aa8.85□□□□□ -0.99
CLIP1-214ENST00000540539 C1GALT1C1LP0DN25 315 aa8.85□□□□□ -0.99
CLIP1-214ENST00000540539 HNF1AP20823 631 aa8.85□□□□□ -0.99
CLIP1-214ENST00000540539 ACKR3P25106 362 aa8.85□□□□□ -0.99
CLIP1-214ENST00000540539 GDI1P31150 447 aa8.85□□□□□ -0.99
CLIP1-214ENST00000540539 AKR1C3P42330 323 aa8.85□□□□□ -0.99
CLIP1-214ENST00000540539 SOX8P57073 446 aa8.85□□□□□ -0.99
CLIP1-214ENST00000540539 MRPS10P82664 201 aaKnown RBP8.85□□□□□ -0.99
CLIP1-214ENST00000540539 SLC10A6Q3KNW5 377 aa8.85□□□□□ -0.99
CLIP1-214ENST00000540539 FAM174BQ3ZCQ3 159 aa8.85□□□□□ -0.99
CLIP1-214ENST00000540539 ATAT1Q5SQI0 421 aa8.85□□□□□ -0.99
CLIP1-214ENST00000540539 HACD4Q5VWC8 232 aa8.85□□□□□ -0.99
CLIP1-214ENST00000540539 OVOS1Q6IE37 1185 aa8.85□□□□□ -0.99
CLIP1-214ENST00000540539 OR6B2Q6IFH4 312 aa8.85□□□□□ -0.99
CLIP1-214ENST00000540539 IL20RBQ6UXL0 311 aa8.85□□□□□ -0.99
CLIP1-214ENST00000540539 ABHD13Q7L211 337 aa8.85□□□□□ -0.99
CLIP1-214ENST00000540539 LAPTM4BQ86VI4 370 aa8.85□□□□□ -0.99
CLIP1-214ENST00000540539 FAM131BQ86XD5 332 aa8.85□□□□□ -0.99
CLIP1-214ENST00000540539 NPAS3Q8IXF0 933 aa8.85□□□□□ -0.99
CLIP1-214ENST00000540539 PNPLA1Q8N8W4 532 aa8.85□□□□□ -0.99
CLIP1-214ENST00000540539 OR10G2Q8NGC3 310 aa8.85□□□□□ -0.99
CLIP1-214ENST00000540539 OR5M3Q8NGP4 307 aa8.85□□□□□ -0.99
CLIP1-214ENST00000540539 STOML3Q8TAV4 291 aa8.85□□□□□ -0.99
CLIP1-214ENST00000540539 PIGKQ92643 395 aa8.85□□□□□ -0.99
CLIP1-214ENST00000540539 PNPLA2Q96AD5 504 aa8.85□□□□□ -0.99
CLIP1-214ENST00000540539 SLC25A36Q96CQ1 311 aa8.85□□□□□ -0.99
CLIP1-214ENST00000540539 TCTN2Q96GX1 697 aa8.85□□□□□ -0.99
CLIP1-214ENST00000540539 IL4I1Q96RQ9 567 aa8.85□□□□□ -0.99
CLIP1-214ENST00000540539 CPPED1Q9BRF8 314 aaPredicted RBP8.85□□□□□ -0.99
CLIP1-214ENST00000540539 MFFQ9GZY8 342 aa8.85□□□□□ -0.99
CLIP1-214ENST00000540539 SFXN1Q9H9B4 322 aa8.85□□□□□ -0.99
CLIP1-214ENST00000540539 FAM86C1Q9NVL1 165 aa8.85□□□□□ -0.99
CLIP1-214ENST00000540539 GDF2Q9UK05 429 aaPredicted RBP8.85□□□□□ -0.99
CLIP1-214ENST00000540539 FBXL3Q9UKT7 428 aa8.85□□□□□ -0.99
CLIP1-214ENST00000540539 FZD4Q9ULV1 537 aa8.85□□□□□ -0.99
CLIP1-214ENST00000540539 USP3Q9Y6I4 520 aa8.85□□□□□ -0.99
CLIP1-214ENST00000540539 DNAH12Q6ZR08 3092 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms