RNA–Protein interactions for RNA: ENST00000540445.5

LMO3-222, Transcript of LIM domain only 3, humanhuman

TSL 2 BASIC

Gene LMO3, Length 906 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-222ENST00000540445 EMX2Q04743 252 aa8.12□□□□□ -1.11
LMO3-222ENST00000540445 STX3Q13277 289 aa8.12□□□□□ -1.11
LMO3-222ENST00000540445 PON3Q15166 354 aa8.12□□□□□ -1.11
LMO3-222ENST00000540445 CPEB4Q17RY0 729 aaKnown RBP eCLIP8.12□□□□□ -1.11
LMO3-222ENST00000540445 VWA1Q6PCB0 445 aa8.12□□□□□ -1.11
LMO3-222ENST00000540445 BHLHB9Q6PI77 547 aa8.12□□□□□ -1.11
LMO3-222ENST00000540445 ZAR1Q86SH2 424 aa8.12□□□□□ -1.11
LMO3-222ENST00000540445 CDC20BQ86Y33 519 aa8.12□□□□□ -1.11
LMO3-222ENST00000540445 WDR75Q8IWA0 830 aaKnown RBP8.12□□□□□ -1.11
LMO3-222ENST00000540445 ZNF781Q8N8C0 355 aa8.12□□□□□ -1.11
LMO3-222ENST00000540445 ZNF527Q8NB42 609 aa8.12□□□□□ -1.11
LMO3-222ENST00000540445 OR56A1Q8NGH5 318 aa8.12□□□□□ -1.11
LMO3-222ENST00000540445 OR5AK3PQ8NH89 298 aa8.12□□□□□ -1.11
LMO3-222ENST00000540445 FNDC9Q8TBE3 224 aa8.12□□□□□ -1.11
LMO3-222ENST00000540445 PHOSPHO1Q8TCT1 267 aa8.12□□□□□ -1.11
LMO3-222ENST00000540445 FIG4Q92562 907 aa8.12□□□□□ -1.11
LMO3-222ENST00000540445 COQ8BQ96D53 544 aa8.12□□□□□ -1.11
LMO3-222ENST00000540445 STARD4Q96DR4 205 aa8.12□□□□□ -1.11
LMO3-222ENST00000540445 ZNF845Q96IR2 970 aaPredicted RBP8.12□□□□□ -1.11
LMO3-222ENST00000540445 STACQ99469 402 aa8.12□□□□□ -1.11
LMO3-222ENST00000540445 SLC39A3Q9BRY0 314 aa8.12□□□□□ -1.11
LMO3-222ENST00000540445 HOXD1Q9GZZ0 328 aa8.12□□□□□ -1.11
LMO3-222ENST00000540445 CXXC4Q9H2H0 198 aa8.12□□□□□ -1.11
LMO3-222ENST00000540445 PIGUQ9H490 435 aa8.12□□□□□ -1.11
LMO3-222ENST00000540445 DUSP22Q9NRW4 184 aa8.12□□□□□ -1.11
LMO3-222ENST00000540445 SIRT3Q9NTG7 399 aaPredicted RBP8.12□□□□□ -1.11
LMO3-222ENST00000540445 GIN1Q9NXP7 522 aa8.12□□□□□ -1.11
LMO3-222ENST00000540445 NOP53Q9NZM5 478 aaKnown RBP8.12□□□□□ -1.11
LMO3-222ENST00000540445 DSCAMO60469 2012 aa8.12□□□□□ -1.11
LMO3-222ENST00000540445 SETD2Q9BYW2 2564 aaPredicted RBP8.12□□□□□ -1.11
LMO3-222ENST00000540445 A0A087WZY1 265 aa8.11□□□□□ -1.11
LMO3-222ENST00000540445 IGLV3-32A0A0A0MS00 114 aa8.11□□□□□ -1.11
LMO3-222ENST00000540445 TNFSF12-TNFSF13A0A0A6YY99 330 aa8.11□□□□□ -1.11
LMO3-222ENST00000540445 SH3D21A4FU49 640 aa8.11□□□□□ -1.11
LMO3-222ENST00000540445 MSTNO14793 375 aa8.11□□□□□ -1.11
LMO3-222ENST00000540445 HCRTR2O43614 444 aa8.11□□□□□ -1.11
LMO3-222ENST00000540445 TNFSF13O75888 250 aa8.11□□□□□ -1.11
LMO3-222ENST00000540445 PLGP00747 810 aaPredicted RBP8.11□□□□□ -1.11
LMO3-222ENST00000540445 NGFRP08138 427 aa8.11□□□□□ -1.11
LMO3-222ENST00000540445 KRT16P08779 473 aa8.11□□□□□ -1.11
LMO3-222ENST00000540445 CD1EP15812 388 aa8.11□□□□□ -1.11
LMO3-222ENST00000540445 MATN1P21941 496 aa8.11□□□□□ -1.11
LMO3-222ENST00000540445 ME2P23368 584 aa8.11□□□□□ -1.11
LMO3-222ENST00000540445 LCN1P31025 176 aa8.11□□□□□ -1.11
LMO3-222ENST00000540445 CLDN8P56748 225 aa8.11□□□□□ -1.11
LMO3-222ENST00000540445 HBA1P69905 142 aa8.11□□□□□ -1.11
LMO3-222ENST00000540445 FAM27E3Q08E93 113 aa8.11□□□□□ -1.11
LMO3-222ENST00000540445 HHATQ5VTY9 493 aa8.11□□□□□ -1.11
LMO3-222ENST00000540445 CDC73Q6P1J9 531 aa8.11□□□□□ -1.11
LMO3-222ENST00000540445 BTLAQ7Z6A9 289 aa8.11□□□□□ -1.11
LMO3-222ENST00000540445 CROCCP2Q86T23 111 aa8.11□□□□□ -1.11
LMO3-222ENST00000540445 MISPQ8IVT2 679 aa8.11□□□□□ -1.11
LMO3-222ENST00000540445 ZNF614Q8N883 585 aa8.11□□□□□ -1.11
LMO3-222ENST00000540445 ZNF610Q8N9Z0 462 aa8.11□□□□□ -1.11
LMO3-222ENST00000540445 VPS37AQ8NEZ2 397 aa8.11□□□□□ -1.11
LMO3-222ENST00000540445 B4GALNT2Q8NHY0 566 aa8.11□□□□□ -1.11
LMO3-222ENST00000540445 ACTRT2Q8TDY3 377 aa8.11□□□□□ -1.11
LMO3-222ENST00000540445 NINJ1Q92982 152 aa8.11□□□□□ -1.11
LMO3-222ENST00000540445 ZBTB8AQ96BR9 441 aa8.11□□□□□ -1.11
LMO3-222ENST00000540445 MOAP1Q96BY2 351 aa8.11□□□□□ -1.11
LMO3-222ENST00000540445 DACH2Q96NX9 599 aa8.11□□□□□ -1.11
LMO3-222ENST00000540445 ZIM3Q96PE6 472 aa8.11□□□□□ -1.11
LMO3-222ENST00000540445 DPY30Q9C005 99 aa8.11□□□□□ -1.11
LMO3-222ENST00000540445 BHLHE41Q9C0J9 482 aaPredicted RBP8.11□□□□□ -1.11
LMO3-222ENST00000540445 OPN3Q9H1Y3 402 aaPredicted RBP8.11□□□□□ -1.11
LMO3-222ENST00000540445 CXorf36Q9H7Y0 433 aa8.11□□□□□ -1.11
LMO3-222ENST00000540445 AKTIPQ9H8T0 292 aa8.11□□□□□ -1.11
LMO3-222ENST00000540445 SSU72Q9NP77 194 aaKnown RBP8.11□□□□□ -1.11
LMO3-222ENST00000540445 ST6GALNAC2Q9UJ37 374 aa8.11□□□□□ -1.11
LMO3-222ENST00000540445 PLEKHA6Q9Y2H5 1048 aa8.11□□□□□ -1.11
LMO3-222ENST00000540445 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.11□□□□□ -1.11
LMO3-222ENST00000540445 RAP2CQ9Y3L5 183 aa8.11□□□□□ -1.11
LMO3-222ENST00000540445 NF1P21359 2839 aa8.11□□□□□ -1.11
LMO3-222ENST00000540445 FREM1Q5H8C1 2179 aa8.1□□□□□ -1.11
LMO3-222ENST00000540445 RAI1Q7Z5J4 1906 aaPredicted RBP8.1□□□□□ -1.11
LMO3-222ENST00000540445 NPIPA5A0A0B4J1W7 369 aa8.1□□□□□ -1.11
LMO3-222ENST00000540445 A0A1W2PQD3 144 aa8.1□□□□□ -1.11
LMO3-222ENST00000540445 DUXAA6NLW8 204 aa8.1□□□□□ -1.11
LMO3-222ENST00000540445 NPIPA7E9PJI5 369 aa8.1□□□□□ -1.11
LMO3-222ENST00000540445 SNUPNO95149 360 aaKnown RBP8.1□□□□□ -1.11
LMO3-222ENST00000540445 SYNGR4O95473 234 aa8.1□□□□□ -1.11
LMO3-222ENST00000540445 CPSF4O95639 269 aaKnown RBP8.1□□□□□ -1.11
LMO3-222ENST00000540445 TUBBP07437 444 aa8.1□□□□□ -1.11
LMO3-222ENST00000540445 NPIPA8P0DM63 369 aa8.1□□□□□ -1.11
LMO3-222ENST00000540445 FCGR2AP12318 317 aa8.1□□□□□ -1.11
LMO3-222ENST00000540445 POU2F1P14859 743 aa8.1□□□□□ -1.11
LMO3-222ENST00000540445 ZNF17P17021 662 aa8.1□□□□□ -1.11
LMO3-222ENST00000540445 BGNP21810 368 aa8.1□□□□□ -1.11
LMO3-222ENST00000540445 KIR2DL2P43627 348 aaPredicted RBP8.1□□□□□ -1.11
LMO3-222ENST00000540445 RNF144AP50876 292 aaPredicted RBP8.1□□□□□ -1.11
LMO3-222ENST00000540445 CASP9P55211 416 aa8.1□□□□□ -1.11
LMO3-222ENST00000540445 CTBP2P56545 445 aa8.1□□□□□ -1.11
LMO3-222ENST00000540445 CARD18P57730 90 aa8.1□□□□□ -1.11
LMO3-222ENST00000540445 RAC1P63000 192 aa8.1□□□□□ -1.11
LMO3-222ENST00000540445 KEAP1Q14145 624 aa8.1□□□□□ -1.11
LMO3-222ENST00000540445 FGFBP1Q14512 234 aa8.1□□□□□ -1.11
LMO3-222ENST00000540445 POU4F3Q15319 338 aa8.1□□□□□ -1.11
LMO3-222ENST00000540445 GPR68Q15743 365 aa8.1□□□□□ -1.11
LMO3-222ENST00000540445 SMU1Q2TAY7 513 aa8.1□□□□□ -1.11
LMO3-222ENST00000540445 DCST2Q5T1A1 773 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms