RNA–Protein interactions for RNA: ENST00000540109.5

PTPRD-214, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 6,210 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-214ENST00000540109 TMEM173Q86WV6 379 aaPredicted RBP5.71□□□□□ -1.5
PTPRD-214ENST00000540109 FUNDC1Q8IVP5 155 aa5.71□□□□□ -1.5
PTPRD-214ENST00000540109 ZFP41Q8N8Y5 198 aa5.71□□□□□ -1.5
PTPRD-214ENST00000540109 B3GNT7Q8NFL0 401 aa5.71□□□□□ -1.5
PTPRD-214ENST00000540109 PXT1Q8NFP0 134 aa5.71□□□□□ -1.5
PTPRD-214ENST00000540109 WDR48Q8TAF3 677 aa5.71□□□□□ -1.5
PTPRD-214ENST00000540109 HMGB4Q8WW32 186 aa5.71□□□□□ -1.5
PTPRD-214ENST00000540109 NKD1Q969G9 470 aa5.71□□□□□ -1.5
PTPRD-214ENST00000540109 ECHDC3Q96DC8 303 aa5.71□□□□□ -1.5
PTPRD-214ENST00000540109 COPS8Q99627 209 aa5.71□□□□□ -1.5
PTPRD-214ENST00000540109 ASB8Q9H765 288 aa5.71□□□□□ -1.5
PTPRD-214ENST00000540109 DDX31Q9H8H2 851 aaKnown RBP5.71□□□□□ -1.5
PTPRD-214ENST00000540109 SLC28A3Q9HAS3 691 aa5.71□□□□□ -1.5
PTPRD-214ENST00000540109 NUP205Q92621 2012 aa5.71□□□□□ -1.5
PTPRD-214ENST00000540109 URADA6NGE7 173 aa5.71□□□□□ -1.5
PTPRD-214ENST00000540109 TAAR5O14804 337 aa5.71□□□□□ -1.5
PTPRD-214ENST00000540109 UGDHO60701 494 aa5.71□□□□□ -1.5
PTPRD-214ENST00000540109 FGF18O76093 207 aa5.71□□□□□ -1.5
PTPRD-214ENST00000540109 PIPP12273 146 aaPredicted RBP5.71□□□□□ -1.5
PTPRD-214ENST00000540109 MTHFD2P13995 350 aa5.71□□□□□ -1.5
PTPRD-214ENST00000540109 GPX3P22352 226 aa5.71□□□□□ -1.5
PTPRD-214ENST00000540109 RPS14P62263 151 aaKnown RBP5.71□□□□□ -1.5
PTPRD-214ENST00000540109 ACTA2P62736 377 aa5.71□□□□□ -1.5
PTPRD-214ENST00000540109 ACTG2P63267 376 aa5.71□□□□□ -1.5
PTPRD-214ENST00000540109 TLE3Q04726 772 aa5.71□□□□□ -1.5
PTPRD-214ENST00000540109 MLLT11Q13015 90 aaPredicted RBP5.71□□□□□ -1.5
PTPRD-214ENST00000540109 OR4D1Q15615 310 aa5.71□□□□□ -1.5
PTPRD-214ENST00000540109 NHSL2Q5HYW2 709 aa5.71□□□□□ -1.5
PTPRD-214ENST00000540109 C8orf82Q6P1X6 216 aaPredicted RBP5.71□□□□□ -1.5
PTPRD-214ENST00000540109 RPTNQ6XPR3 784 aa5.71□□□□□ -1.5
PTPRD-214ENST00000540109 LIN28BQ6ZN17 250 aaKnown RBP eCLIP5.71□□□□□ -1.5
PTPRD-214ENST00000540109 ZER1Q7Z7L7 766 aa5.71□□□□□ -1.5
PTPRD-214ENST00000540109 RASGRP3Q8IV61 690 aa5.71□□□□□ -1.5
PTPRD-214ENST00000540109 NRSN1Q8IZ57 195 aa5.71□□□□□ -1.5
PTPRD-214ENST00000540109 OR2A12Q8NGT7 310 aa5.71□□□□□ -1.5
PTPRD-214ENST00000540109 NEIL3Q8TAT5 605 aa5.71□□□□□ -1.5
PTPRD-214ENST00000540109 OSTF1Q92882 214 aa5.71□□□□□ -1.5
PTPRD-214ENST00000540109 PHYHIPLQ96FC7 376 aa5.71□□□□□ -1.5
PTPRD-214ENST00000540109 MED8Q96G25 268 aa5.71□□□□□ -1.5
PTPRD-214ENST00000540109 EPYCQ99645 322 aa5.71□□□□□ -1.5
PTPRD-214ENST00000540109 DPEP2Q9H4A9 486 aa5.71□□□□□ -1.5
PTPRD-214ENST00000540109 PCDHGA9Q9Y5G4 932 aaKnown RBP5.71□□□□□ -1.5
PTPRD-214ENST00000540109 CACNG2Q9Y698 323 aa5.71□□□□□ -1.5
PTPRD-214ENST00000540109 C17orf113A0A1B0GUU1 675 aa5.7□□□□□ -1.5
PTPRD-214ENST00000540109 A0A1W2PRB8 838 aa5.7□□□□□ -1.5
PTPRD-214ENST00000540109 C2orf78A6NCI8 922 aa5.7□□□□□ -1.5
PTPRD-214ENST00000540109 PHOX2AO14813 284 aa5.7□□□□□ -1.5
PTPRD-214ENST00000540109 PRODHO43272 600 aa5.7□□□□□ -1.5
PTPRD-214ENST00000540109 FADS1O60427 444 aa5.7□□□□□ -1.5
PTPRD-214ENST00000540109 GREM1O60565 184 aa5.7□□□□□ -1.5
PTPRD-214ENST00000540109 AQP8O94778 261 aa5.7□□□□□ -1.5
PTPRD-214ENST00000540109 SOX14O95416 240 aa5.7□□□□□ -1.5
PTPRD-214ENST00000540109 TSPAN15O95858 294 aa5.7□□□□□ -1.5
PTPRD-214ENST00000540109 C8AP07357 584 aa5.7□□□□□ -1.5
PTPRD-214ENST00000540109 C5AR1P21730 350 aa5.7□□□□□ -1.5
PTPRD-214ENST00000540109 PREPP48147 710 aa5.7□□□□□ -1.5
PTPRD-214ENST00000540109 IDH3GP51553 393 aaPredicted RBP5.7□□□□□ -1.5
PTPRD-214ENST00000540109 CLCN7P51798 805 aa5.7□□□□□ -1.5
PTPRD-214ENST00000540109 SPIN4Q56A73 249 aa5.7□□□□□ -1.5
PTPRD-214ENST00000540109 ATAT1Q5SQI0 421 aa5.7□□□□□ -1.5
PTPRD-214ENST00000540109 GLT8D1Q68CQ7 371 aa5.7□□□□□ -1.5
PTPRD-214ENST00000540109 SLC6A19Q695T7 634 aa5.7□□□□□ -1.5
PTPRD-214ENST00000540109 FBXO46Q6PJ61 603 aaPredicted RBP5.7□□□□□ -1.5
PTPRD-214ENST00000540109 NDUFAF7Q7L592 441 aa5.7□□□□□ -1.5
PTPRD-214ENST00000540109 TRMT11Q7Z4G4 463 aaKnown RBP5.7□□□□□ -1.5
PTPRD-214ENST00000540109 ZNF227Q86WZ6 799 aa5.7□□□□□ -1.5
PTPRD-214ENST00000540109 LILRB2Q8N423 598 aa5.7□□□□□ -1.5
PTPRD-214ENST00000540109 ARL14EPQ8N8R7 260 aaPredicted RBP5.7□□□□□ -1.5
PTPRD-214ENST00000540109 DNAAF1Q8NEP3 725 aa5.7□□□□□ -1.5
PTPRD-214ENST00000540109 SP7Q8TDD2 431 aaPredicted RBP5.7□□□□□ -1.5
PTPRD-214ENST00000540109 ESAMQ96AP7 390 aa5.7□□□□□ -1.5
PTPRD-214ENST00000540109 NELL2Q99435 816 aa5.7□□□□□ -1.5
PTPRD-214ENST00000540109 SPNS1Q9H2V7 528 aa5.7□□□□□ -1.5
PTPRD-214ENST00000540109 SUV39H2Q9H5I1 410 aa5.7□□□□□ -1.5
PTPRD-214ENST00000540109 TXNL4BQ9NX01 149 aaKnown RBP5.7□□□□□ -1.5
PTPRD-214ENST00000540109 DNAJC15Q9Y5T4 150 aa5.7□□□□□ -1.5
PTPRD-214ENST00000540109 WIF1Q9Y5W5 379 aa5.7□□□□□ -1.5
PTPRD-214ENST00000540109 NPFFR2Q9Y5X5 522 aa5.7□□□□□ -1.5
PTPRD-214ENST00000540109 LINC00862A6NCI5 91 aa5.7□□□□□ -1.5
PTPRD-214ENST00000540109 NPEPPSL1A6NEC2 478 aa5.7□□□□□ -1.5
PTPRD-214ENST00000540109 CD8B2A6NJW9 211 aa5.7□□□□□ -1.5
PTPRD-214ENST00000540109 LEFTY2O00292 366 aa5.7□□□□□ -1.5
PTPRD-214ENST00000540109 MTX2O75431 263 aa5.7□□□□□ -1.5
PTPRD-214ENST00000540109 CREG1O75629 220 aa5.7□□□□□ -1.5
PTPRD-214ENST00000540109 DCNP07585 359 aaKnown RBP5.7□□□□□ -1.5
PTPRD-214ENST00000540109 CD8BP10966 210 aa5.7□□□□□ -1.5
PTPRD-214ENST00000540109 ZNF25P17030 456 aaPredicted RBP5.7□□□□□ -1.5
PTPRD-214ENST00000540109 RHCEP18577 417 aa5.7□□□□□ -1.5
PTPRD-214ENST00000540109 GGT5P36269 586 aa5.7□□□□□ -1.5
PTPRD-214ENST00000540109 PRKXP51817 358 aa5.7□□□□□ -1.5
PTPRD-214ENST00000540109 PRKAG1P54619 331 aa5.7□□□□□ -1.5
PTPRD-214ENST00000540109 EPHA4P54764 986 aa5.7□□□□□ -1.5
PTPRD-214ENST00000540109 SSBP1Q04837 148 aaKnown RBP5.7□□□□□ -1.5
PTPRD-214ENST00000540109 CAMK2DQ13557 499 aa5.7□□□□□ -1.5
PTPRD-214ENST00000540109 LARS2Q15031 903 aaKnown RBP5.7□□□□□ -1.5
PTPRD-214ENST00000540109 TCTE1Q5JU00 501 aa5.7□□□□□ -1.5
PTPRD-214ENST00000540109 ZBTB37Q5TC79 503 aa5.7□□□□□ -1.5
PTPRD-214ENST00000540109 RANBP3LQ86VV4 465 aaPredicted RBP5.7□□□□□ -1.5
PTPRD-214ENST00000540109 LAX1Q8IWV1 398 aa5.7□□□□□ -1.5
PTPRD-214ENST00000540109 DCLRE1CQ96SD1 692 aaKnown RBP5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms