RNA–Protein interactions for RNA: ENST00000539097.2

HIF1A-204, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,956 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-204ENST00000539097 CRCPO75575 148 aa0.85□□□□□ -2.27
HIF1A-204ENST00000539097 MT-ATP6P00846 226 aa0.85□□□□□ -2.27
HIF1A-204ENST00000539097 OXTP01178 125 aa0.85□□□□□ -2.27
HIF1A-204ENST00000539097 SEMG1P04279 462 aa0.85□□□□□ -2.27
HIF1A-204ENST00000539097 ALDOBP05062 364 aa0.85□□□□□ -2.27
HIF1A-204ENST00000539097 GPR89BP0CG08 455 aa0.85□□□□□ -2.27
HIF1A-204ENST00000539097 TPBGLP0DKB5 382 aa0.85□□□□□ -2.27
HIF1A-204ENST00000539097 CPN1P15169 458 aa0.85□□□□□ -2.27
HIF1A-204ENST00000539097 DRD5P21918 477 aa0.85□□□□□ -2.27
HIF1A-204ENST00000539097 CCNCP24863 283 aa0.85□□□□□ -2.27
HIF1A-204ENST00000539097 CYP2F1P24903 491 aa0.85□□□□□ -2.27
HIF1A-204ENST00000539097 LMO2P25791 158 aa0.85□□□□□ -2.27
HIF1A-204ENST00000539097 IL12AP29459 219 aa0.85□□□□□ -2.27
HIF1A-204ENST00000539097 CDH5P33151 784 aaPredicted RBP0.85□□□□□ -2.27
HIF1A-204ENST00000539097 MAP3K8P41279 467 aa0.85□□□□□ -2.27
HIF1A-204ENST00000539097 NR0B1P51843 470 aaKnown RBP0.85□□□□□ -2.27
HIF1A-204ENST00000539097 CCNG1P51959 295 aa0.85□□□□□ -2.27
HIF1A-204ENST00000539097 ERVFC1-1P60608 527 aa0.85□□□□□ -2.27
HIF1A-204ENST00000539097 ACTR1AP61163 376 aa0.85□□□□□ -2.27
HIF1A-204ENST00000539097 RPL27P61353 136 aaKnown RBP0.85□□□□□ -2.27
HIF1A-204ENST00000539097 ZP4Q12836 540 aa0.85□□□□□ -2.27
HIF1A-204ENST00000539097 IL24Q13007 206 aa0.85□□□□□ -2.27
HIF1A-204ENST00000539097 FHL1Q13642 323 aa0.85□□□□□ -2.27
HIF1A-204ENST00000539097 CEACAM7Q14002 265 aa0.85□□□□□ -2.27
HIF1A-204ENST00000539097 FZD2Q14332 565 aa0.85□□□□□ -2.27
HIF1A-204ENST00000539097 EXOSC7Q15024 291 aaKnown RBP0.85□□□□□ -2.27
HIF1A-204ENST00000539097 ZNF77Q15935 545 aa0.85□□□□□ -2.27
HIF1A-204ENST00000539097 ZNF718Q3SXZ3 478 aa0.85□□□□□ -2.27
HIF1A-204ENST00000539097 SLC36A3Q495N2 470 aa0.85□□□□□ -2.27
HIF1A-204ENST00000539097 LYPLAL1Q5VWZ2 237 aa0.85□□□□□ -2.27
HIF1A-204ENST00000539097 STUMQ69YW2 141 aa0.85□□□□□ -2.27
HIF1A-204ENST00000539097 RAET1GQ6H3X3 334 aa0.85□□□□□ -2.27
HIF1A-204ENST00000539097 PNCKQ6P2M8 343 aa0.85□□□□□ -2.27
HIF1A-204ENST00000539097 LCLAT1Q6UWP7 414 aa0.85□□□□□ -2.27
HIF1A-204ENST00000539097 TRMT11Q7Z4G4 463 aaKnown RBP0.85□□□□□ -2.27
HIF1A-204ENST00000539097 HDDC2Q7Z4H3 204 aa0.85□□□□□ -2.27
HIF1A-204ENST00000539097 CCDC50Q8IVM0 306 aa0.85□□□□□ -2.27
HIF1A-204ENST00000539097 CDH26Q8IXH8 852 aa0.85□□□□□ -2.27
HIF1A-204ENST00000539097 TCEANCQ8N8B7 351 aa0.85□□□□□ -2.27
HIF1A-204ENST00000539097 AQP11Q8NBQ7 271 aa0.85□□□□□ -2.27
HIF1A-204ENST00000539097 OR52K1Q8NGK4 314 aa0.85□□□□□ -2.27
HIF1A-204ENST00000539097 WDR36Q8NI36 951 aaKnown RBP0.85□□□□□ -2.27
HIF1A-204ENST00000539097 SEPT8Q92599 483 aa0.85□□□□□ -2.27
HIF1A-204ENST00000539097 SENP8Q96LD8 212 aa0.85□□□□□ -2.27
HIF1A-204ENST00000539097 ZNF354BQ96LW1 612 aa0.85□□□□□ -2.27
HIF1A-204ENST00000539097 HIST1H4GQ99525 98 aa0.85□□□□□ -2.27
HIF1A-204ENST00000539097 WACQ9BTA9 647 aa0.85□□□□□ -2.27
HIF1A-204ENST00000539097 TMEM121Q9BTD3 319 aa0.85□□□□□ -2.27
HIF1A-204ENST00000539097 CLEC7AQ9BXN2 247 aa0.85□□□□□ -2.27
HIF1A-204ENST00000539097 CAPS2Q9BXY5 557 aa0.85□□□□□ -2.27
HIF1A-204ENST00000539097 TRIM15Q9C019 465 aa0.85□□□□□ -2.27
HIF1A-204ENST00000539097 HIPK2Q9H2X6 1198 aa0.85□□□□□ -2.27
HIF1A-204ENST00000539097 SP140LQ9H930 580 aa0.85□□□□□ -2.27
HIF1A-204ENST00000539097 ROPN1Q9HAT0 212 aaPredicted RBP0.85□□□□□ -2.27
HIF1A-204ENST00000539097 TMEM165Q9HC07 324 aa0.85□□□□□ -2.27
HIF1A-204ENST00000539097 SMPD3Q9NY59 655 aaPredicted RBP0.85□□□□□ -2.27
HIF1A-204ENST00000539097 AATFQ9NY61 560 aaKnown RBP eCLIP0.85□□□□□ -2.27
HIF1A-204ENST00000539097 COPS7AQ9UBW8 275 aa0.85□□□□□ -2.27
HIF1A-204ENST00000539097 HPCAL4Q9UM19 191 aa0.85□□□□□ -2.27
HIF1A-204ENST00000539097 B9D1Q9UPM9 204 aa0.85□□□□□ -2.27
HIF1A-204ENST00000539097 L3MBTL1Q9Y468 752 aa0.85□□□□□ -2.27
HIF1A-204ENST00000539097 PEX16Q9Y5Y5 336 aa0.85□□□□□ -2.27
HIF1A-204ENST00000539097 POGZQ7Z3K3 1410 aa0.85□□□□□ -2.27
HIF1A-204ENST00000539097 KDM5CP41229 1560 aa0.85□□□□□ -2.27
HIF1A-204ENST00000539097 SF3B1O75533 1304 aaKnown RBP eCLIP0.85□□□□□ -2.274e-6■■■■□ 20.1
HIF1A-204ENST00000539097 PPIAL4EA0A075B759 164 aa0.84□□□□□ -2.27
HIF1A-204ENST00000539097 MEIOCA2RUB1 952 aa0.84□□□□□ -2.27
HIF1A-204ENST00000539097 FOXI3A8MTJ6 420 aaPredicted RBP0.84□□□□□ -2.27
HIF1A-204ENST00000539097 RNASEK-C17orf49H0YIS7 233 aa0.84□□□□□ -2.27
HIF1A-204ENST00000539097 FOXE1O00358 373 aaPredicted RBP0.84□□□□□ -2.27
HIF1A-204ENST00000539097 CYB561D2O14569 222 aa0.84□□□□□ -2.27
HIF1A-204ENST00000539097 ZG16O60844 167 aa0.84□□□□□ -2.27
HIF1A-204ENST00000539097 BCAS1O75363 584 aaPredicted RBP0.84□□□□□ -2.27
HIF1A-204ENST00000539097 TRMUO75648 421 aaKnown RBP0.84□□□□□ -2.27
HIF1A-204ENST00000539097 RHBDL1O75783 438 aa0.84□□□□□ -2.27
HIF1A-204ENST00000539097 FGFR1OPO95684 399 aaKnown RBP0.84□□□□□ -2.27
HIF1A-204ENST00000539097 PGK1P00558 417 aa0.84□□□□□ -2.27
HIF1A-204ENST00000539097 GAPDHP04406 335 aaKnown RBP0.84□□□□□ -2.27
HIF1A-204ENST00000539097 C2P06681 752 aa0.84□□□□□ -2.27
HIF1A-204ENST00000539097 FGF4P08620 206 aa0.84□□□□□ -2.27
HIF1A-204ENST00000539097 PPIAL4FP0DN26 164 aa0.84□□□□□ -2.27
HIF1A-204ENST00000539097 TDGF1P13385 188 aa0.84□□□□□ -2.27
HIF1A-204ENST00000539097 FDFT1P37268 417 aa0.84□□□□□ -2.27
HIF1A-204ENST00000539097 ARRB1P49407 418 aaPredicted RBP0.84□□□□□ -2.27
HIF1A-204ENST00000539097 ATP4BP51164 291 aa0.84□□□□□ -2.27
HIF1A-204ENST00000539097 TDGF1P3P51864 188 aa0.84□□□□□ -2.27
HIF1A-204ENST00000539097 MRPS6P82932 125 aaKnown RBP0.84□□□□□ -2.27
HIF1A-204ENST00000539097 CD300CQ08708 224 aa0.84□□□□□ -2.27
HIF1A-204ENST00000539097 BNIP1Q12981 228 aa0.84□□□□□ -2.27
HIF1A-204ENST00000539097 RAPSNQ13702 412 aa0.84□□□□□ -2.27
HIF1A-204ENST00000539097 ZBTB6Q15916 424 aa0.84□□□□□ -2.27
HIF1A-204ENST00000539097 KRT71Q3SY84 523 aa0.84□□□□□ -2.27
HIF1A-204ENST00000539097 LINC01620Q4KN68 170 aa0.84□□□□□ -2.27
HIF1A-204ENST00000539097 C2CD6Q53TS8 623 aa0.84□□□□□ -2.27
HIF1A-204ENST00000539097 CFAP157Q5JU67 520 aa0.84□□□□□ -2.27
HIF1A-204ENST00000539097 TCHHL1Q5QJ38 904 aaPredicted RBP0.84□□□□□ -2.27
HIF1A-204ENST00000539097 OTUD3Q5T2D3 398 aaPredicted RBP0.84□□□□□ -2.27
HIF1A-204ENST00000539097 ATF7IP2Q5U623 682 aa0.84□□□□□ -2.27
HIF1A-204ENST00000539097 TMEM220Q6QAJ8 160 aa0.84□□□□□ -2.27
HIF1A-204ENST00000539097 TFAP2EQ6VUC0 442 aa0.84□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms