RNA–Protein interactions for RNA: ENST00000538744.5

DDX55-205, Transcript of DEAD-box helicase 55, humanhuman

TSL 5 BASIC

Gene DDX55, Length 1,735 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-205ENST00000538744 PIP5K1CO60331 668 aa18.86■□□□□ 0.61
DDX55-205ENST00000538744 BCAS1O75363 584 aaPredicted RBP18.86■□□□□ 0.61
DDX55-205ENST00000538744 LCKP06239 509 aa18.86■□□□□ 0.61
DDX55-205ENST00000538744 DYNC1I2Q13409 638 aaKnown RBP18.86■□□□□ 0.61
DDX55-205ENST00000538744 NNATQ16517 81 aa18.86■□□□□ 0.61
DDX55-205ENST00000538744 ACSM5Q6NUN0 579 aa18.86■□□□□ 0.61
DDX55-205ENST00000538744 ZNF613Q6PF04 617 aa18.86■□□□□ 0.61
DDX55-205ENST00000538744 ZNF574Q6ZN55 896 aaPredicted RBP18.86■□□□□ 0.61
DDX55-205ENST00000538744 FAM26EQ8N5C1 309 aa18.86■□□□□ 0.61
DDX55-205ENST00000538744 BCORP1Q8N888 145 aa18.86■□□□□ 0.61
DDX55-205ENST00000538744 TSLPQ969D9 159 aa18.86■□□□□ 0.61
DDX55-205ENST00000538744 SLC35B4Q969S0 331 aa18.86■□□□□ 0.61
DDX55-205ENST00000538744 YIPF6Q96EC8 236 aa18.86■□□□□ 0.61
DDX55-205ENST00000538744 DSN1Q9H410 356 aa18.86■□□□□ 0.61
DDX55-205ENST00000538744 TMEM27Q9HBJ8 222 aa18.86■□□□□ 0.61
DDX55-205ENST00000538744 SLC24A3Q9HC58 644 aa18.86■□□□□ 0.61
DDX55-205ENST00000538744 DNAJC27Q9NZQ0 273 aa18.86■□□□□ 0.61
DDX55-205ENST00000538744 LYPD3O95274 346 aa18.86■□□□□ 0.61
DDX55-205ENST00000538744 SLC15A1P46059 708 aa18.86■□□□□ 0.61
DDX55-205ENST00000538744 GPR4P46093 362 aa18.86■□□□□ 0.61
DDX55-205ENST00000538744 ATP12AP54707 1039 aa18.86■□□□□ 0.61
DDX55-205ENST00000538744 CCL7P80098 99 aa18.86■□□□□ 0.61
DDX55-205ENST00000538744 RHAGQ02094 409 aa18.86■□□□□ 0.61
DDX55-205ENST00000538744 ACY1Q03154 408 aa18.86■□□□□ 0.61
DDX55-205ENST00000538744 NFATC3Q12968 1075 aa18.86■□□□□ 0.61
DDX55-205ENST00000538744 FGFBP1Q14512 234 aa18.86■□□□□ 0.61
DDX55-205ENST00000538744 ELAVL1Q15717 326 aaKnown RBP18.86■□□□□ 0.61
DDX55-205ENST00000538744 SLC25A30Q5SVS4 291 aa18.86■□□□□ 0.61
DDX55-205ENST00000538744 C1orf189Q5VU69 101 aa18.86■□□□□ 0.61
DDX55-205ENST00000538744 TMPRSS9Q7Z410 1059 aa18.86■□□□□ 0.61
DDX55-205ENST00000538744 CMIPQ8IY22 773 aa18.86■□□□□ 0.61
DDX55-205ENST00000538744 RNF113BQ8IZP6 322 aaKnown RBP18.86■□□□□ 0.61
DDX55-205ENST00000538744 POGLUT1Q8NBL1 392 aa18.86■□□□□ 0.61
DDX55-205ENST00000538744 C9orf43Q8TAL5 461 aaPredicted RBP18.86■□□□□ 0.61
DDX55-205ENST00000538744 OSTF1Q92882 214 aa18.86■□□□□ 0.61
DDX55-205ENST00000538744 NAT6Q93015 286 aa18.86■□□□□ 0.61
DDX55-205ENST00000538744 ZC3H10Q96K80 434 aaKnown RBP18.86■□□□□ 0.61
DDX55-205ENST00000538744 SLC46A1Q96NT5 459 aa18.86■□□□□ 0.61
DDX55-205ENST00000538744 PRRG3Q9BZD7 231 aa18.86■□□□□ 0.61
DDX55-205ENST00000538744 MKKSQ9NPJ1 570 aaPredicted RBP18.86■□□□□ 0.61
DDX55-205ENST00000538744 TIMMDC1Q9NPL8 285 aa18.86■□□□□ 0.61
DDX55-205ENST00000538744 DNAJB12Q9NXW2 375 aaKnown RBP18.86■□□□□ 0.61
DDX55-205ENST00000538744 CLCA3PQ9Y6N3 262 aa18.86■□□□□ 0.61
DDX55-205ENST00000538744 A8MUA0 341 aa18.85■□□□□ 0.61
DDX55-205ENST00000538744 PRKYO43930 277 aa18.85■□□□□ 0.61
DDX55-205ENST00000538744 RPLP0P05388 317 aaKnown RBP18.85■□□□□ 0.61
DDX55-205ENST00000538744 HOXD12P35452 270 aa18.85■□□□□ 0.61
DDX55-205ENST00000538744 SLC37A1P57057 533 aa18.85■□□□□ 0.61
DDX55-205ENST00000538744 IRF3Q14653 427 aa18.85■□□□□ 0.61
DDX55-205ENST00000538744 CPEB4Q17RY0 729 aaKnown RBP eCLIP18.85■□□□□ 0.61
DDX55-205ENST00000538744 MEDAGQ5VYS4 303 aa18.85■□□□□ 0.61
DDX55-205ENST00000538744 ARHGAP22Q7Z5H3 698 aa18.85■□□□□ 0.61
DDX55-205ENST00000538744 MRGPREQ86SM8 312 aa18.85■□□□□ 0.61
DDX55-205ENST00000538744 OR4D9Q8NGE8 314 aa18.85■□□□□ 0.61
DDX55-205ENST00000538744 OR8D4Q8NGM9 314 aa18.85■□□□□ 0.61
DDX55-205ENST00000538744 TMEM239Q8WW34 195 aa18.85■□□□□ 0.61
DDX55-205ENST00000538744 CFL2Q9Y281 166 aa18.85■□□□□ 0.61
DDX55-205ENST00000538744 TCRBV16S1A1N1A0A5B0 115 aa18.84■□□□□ 0.61
DDX55-205ENST00000538744 GABARAPO95166 117 aa18.84■□□□□ 0.61
DDX55-205ENST00000538744 RORAP35398 523 aa18.84■□□□□ 0.61
DDX55-205ENST00000538744 SNAPC1Q16533 368 aa18.84■□□□□ 0.61
DDX55-205ENST00000538744 ZNF550Q7Z398 422 aa18.84■□□□□ 0.61
DDX55-205ENST00000538744 RABEPKQ7Z6M1 372 aa18.84■□□□□ 0.61
DDX55-205ENST00000538744 P2RY8Q86VZ1 359 aa18.84■□□□□ 0.61
DDX55-205ENST00000538744 EID2Q8N6I1 236 aa18.84■□□□□ 0.61
DDX55-205ENST00000538744 RNF217Q8TC41 542 aa18.84■□□□□ 0.61
DDX55-205ENST00000538744 CRELD1Q96HD1 420 aa18.84■□□□□ 0.61
DDX55-205ENST00000538744 SLC38A2Q96QD8 506 aa18.84■□□□□ 0.61
DDX55-205ENST00000538744 CDCA4Q9BXL8 241 aa18.84■□□□□ 0.61
DDX55-205ENST00000538744 TRIM2Q9C040 744 aa18.84■□□□□ 0.61
DDX55-205ENST00000538744 TBC1D23Q9NUY8 699 aa18.84■□□□□ 0.61
DDX55-205ENST00000538744 IL20Q9NYY1 176 aa18.84■□□□□ 0.61
DDX55-205ENST00000538744 ZNF223Q9UK11 482 aaPredicted RBP18.84■□□□□ 0.61
DDX55-205ENST00000538744 RPL36Q9Y3U8 105 aaKnown RBP18.84■□□□□ 0.61
DDX55-205ENST00000538744 A0A1W2PQM1 296 aa18.83■□□□□ 0.61
DDX55-205ENST00000538744 POLR1CO15160 346 aaPredicted RBP18.83■□□□□ 0.61
DDX55-205ENST00000538744 TLX2O43763 284 aaPredicted RBP18.83■□□□□ 0.61
DDX55-205ENST00000538744 PPICP45877 212 aa18.83■□□□□ 0.61
DDX55-205ENST00000538744 VWA2Q5GFL6 755 aa18.83■□□□□ 0.61
DDX55-205ENST00000538744 PLAG1Q6DJT9 500 aa18.83■□□□□ 0.61
DDX55-205ENST00000538744 WDR88Q6ZMY6 472 aa18.83■□□□□ 0.61
DDX55-205ENST00000538744 ZNF620Q6ZNG0 422 aa18.83■□□□□ 0.61
DDX55-205ENST00000538744 CLDN22Q8N7P3 220 aa18.83■□□□□ 0.61
DDX55-205ENST00000538744 CEP76Q8TAP6 659 aa18.83■□□□□ 0.61
DDX55-205ENST00000538744 SLC2A12Q8TD20 617 aa18.83■□□□□ 0.61
DDX55-205ENST00000538744 CLIP3Q96DZ5 547 aa18.83■□□□□ 0.61
DDX55-205ENST00000538744 TSSK6Q9BXA6 273 aa18.83■□□□□ 0.61
DDX55-205ENST00000538744 TEX12Q9BXU0 123 aa18.83■□□□□ 0.61
DDX55-205ENST00000538744 SLC7A5P2Q9GIP4 190 aa18.83■□□□□ 0.61
DDX55-205ENST00000538744 OR8D2Q9GZM6 311 aa18.83■□□□□ 0.61
DDX55-205ENST00000538744 LRRN3Q9H3W5 708 aa18.83■□□□□ 0.61
DDX55-205ENST00000538744 TMEM5Q9Y2B1 443 aa18.83■□□□□ 0.61
DDX55-205ENST00000538744 CDH10Q9Y6N8 788 aa18.83■□□□□ 0.61
DDX55-205ENST00000538744 TMX2-CTNND1H3BSU7 103 aa18.83■□□□□ 0.6
DDX55-205ENST00000538744 CNOT3O75175 753 aaKnown RBP18.83■□□□□ 0.6
DDX55-205ENST00000538744 ADORA3P0DMS8 318 aa18.83■□□□□ 0.6
DDX55-205ENST00000538744 ACAA2P42765 397 aaKnown RBP18.83■□□□□ 0.6
DDX55-205ENST00000538744 EFNB1P98172 346 aa18.83■□□□□ 0.6
DDX55-205ENST00000538744 ZNF91Q05481 1191 aa18.83■□□□□ 0.6
DDX55-205ENST00000538744 CTF1Q16619 201 aa18.83■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms