RNA–Protein interactions for RNA: ENST00000538545.6

ACTN1-205, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 2,813 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-205ENST00000538545 PRMT8Q9NR22 394 aaPredicted RBP13.05□□□□□ -0.32
ACTN1-205ENST00000538545 SATB2Q9UPW6 733 aa13.05□□□□□ -0.32
ACTN1-205ENST00000538545 EP300Q09472 2414 aaPredicted RBP13.04□□□□□ -0.32
ACTN1-205ENST00000538545 AHCYL1O43865 530 aa13.04□□□□□ -0.32
ACTN1-205ENST00000538545 COQ9O75208 318 aa13.04□□□□□ -0.32
ACTN1-205ENST00000538545 ITIH1P19827 911 aa13.04□□□□□ -0.32
ACTN1-205ENST00000538545 MAKP20794 623 aa13.04□□□□□ -0.32
ACTN1-205ENST00000538545 LIPAP38571 399 aa13.04□□□□□ -0.32
ACTN1-205ENST00000538545 RPS6KA3P51812 740 aa13.04□□□□□ -0.32
ACTN1-205ENST00000538545 VBP1P61758 197 aa13.04□□□□□ -0.32
ACTN1-205ENST00000538545 SKP1P63208 163 aa13.04□□□□□ -0.32
ACTN1-205ENST00000538545 SLX4IPQ5VYV7 408 aa13.04□□□□□ -0.32
ACTN1-205ENST00000538545 HSDL2Q6YN16 418 aa13.04□□□□□ -0.32
ACTN1-205ENST00000538545 DEPDC4Q8N2C3 294 aa13.04□□□□□ -0.32
ACTN1-205ENST00000538545 OR4C6Q8NH72 309 aa13.04□□□□□ -0.32
ACTN1-205ENST00000538545 ZNF524Q96C55 264 aa13.04□□□□□ -0.32
ACTN1-205ENST00000538545 RNF167Q9H6Y7 350 aa13.04□□□□□ -0.32
ACTN1-205ENST00000538545 FBLP22087 321 aaKnown RBP13.04□□□□□ -0.32
ACTN1-205ENST00000538545 FUT7Q11130 342 aa13.04□□□□□ -0.32
ACTN1-205ENST00000538545 SNAPC1Q16533 368 aa13.04□□□□□ -0.32
ACTN1-205ENST00000538545 FCRLBQ6BAA4 426 aa13.04□□□□□ -0.32
ACTN1-205ENST00000538545 PRSS48Q7RTY5 328 aa13.04□□□□□ -0.32
ACTN1-205ENST00000538545 WDR5BQ86VZ2 330 aa13.04□□□□□ -0.32
ACTN1-205ENST00000538545 LMF2Q9BU23 707 aaKnown RBP13.04□□□□□ -0.32
ACTN1-205ENST00000538545 RTN4RQ9BZR6 473 aa13.04□□□□□ -0.32
ACTN1-205ENST00000538545 SERTAD3Q9UJW9 196 aa13.04□□□□□ -0.32
ACTN1-205ENST00000538545 CBLCQ9ULV8 474 aa13.04□□□□□ -0.32
ACTN1-205ENST00000538545 CLCA3PQ9Y6N3 262 aa13.04□□□□□ -0.32
ACTN1-205ENST00000538545 FAM183AA6NL82 134 aa13.03□□□□□ -0.32
ACTN1-205ENST00000538545 OIP5O43482 229 aa13.03□□□□□ -0.32
ACTN1-205ENST00000538545 PRAMEF2O60811 474 aa13.03□□□□□ -0.32
ACTN1-205ENST00000538545 NGFRP08138 427 aa13.03□□□□□ -0.32
ACTN1-205ENST00000538545 NCS1P62166 190 aa13.03□□□□□ -0.32
ACTN1-205ENST00000538545 SMARCD3Q6STE5 483 aa13.03□□□□□ -0.32
ACTN1-205ENST00000538545 APOOLQ6UXV4 268 aa13.03□□□□□ -0.32
ACTN1-205ENST00000538545 MED25Q71SY5 747 aa13.03□□□□□ -0.32
ACTN1-205ENST00000538545 OR4Q3Q8NH05 313 aa13.03□□□□□ -0.32
ACTN1-205ENST00000538545 THAP3Q8WTV1 239 aaPredicted RBP13.03□□□□□ -0.32
ACTN1-205ENST00000538545 ACOT11Q8WXI4 607 aaPredicted RBP13.03□□□□□ -0.32
ACTN1-205ENST00000538545 OTULINQ96BN8 352 aa13.03□□□□□ -0.32
ACTN1-205ENST00000538545 LRR1Q96L50 414 aa13.03□□□□□ -0.32
ACTN1-205ENST00000538545 VN1R1Q9GZP7 353 aa13.03□□□□□ -0.32
ACTN1-205ENST00000538545 Q9N2J8 555 aa13.03□□□□□ -0.32
ACTN1-205ENST00000538545 CARD8Q9Y2G2 431 aa13.03□□□□□ -0.32
ACTN1-205ENST00000538545 AHCTF1Q8WYP5 2266 aa13.03□□□□□ -0.32
ACTN1-205ENST00000538545 SDK2Q58EX2 2172 aa13.03□□□□□ -0.32
ACTN1-205ENST00000538545 DMXL1Q9Y485 3027 aa13.03□□□□□ -0.32
ACTN1-205ENST00000538545 A0A1B0GVG6 124 aa13.03□□□□□ -0.32
ACTN1-205ENST00000538545 M0R082 166 aa13.03□□□□□ -0.32
ACTN1-205ENST00000538545 CDK1P06493 297 aa13.03□□□□□ -0.32
ACTN1-205ENST00000538545 THBS1P07996 1170 aa13.03□□□□□ -0.32
ACTN1-205ENST00000538545 GRK5P34947 590 aa13.03□□□□□ -0.32
ACTN1-205ENST00000538545 SLC37A1P57057 533 aa13.03□□□□□ -0.32
ACTN1-205ENST00000538545 GXYLT1Q4G148 440 aa13.03□□□□□ -0.32
ACTN1-205ENST00000538545 CCDC157Q569K6 752 aa13.03□□□□□ -0.32
ACTN1-205ENST00000538545 SLC35F1Q5T1Q4 408 aa13.03□□□□□ -0.32
ACTN1-205ENST00000538545 C12orf73Q69YU5 71 aa13.03□□□□□ -0.32
ACTN1-205ENST00000538545 LCN10Q6JVE6 187 aa13.03□□□□□ -0.32
ACTN1-205ENST00000538545 PWWP2BQ6NUJ5 590 aa13.03□□□□□ -0.32
ACTN1-205ENST00000538545 ERI1Q8IV48 349 aaKnown RBP13.03□□□□□ -0.32
ACTN1-205ENST00000538545 NUDT9Q9BW91 350 aa13.03□□□□□ -0.32
ACTN1-205ENST00000538545 TSSK6Q9BXA6 273 aa13.03□□□□□ -0.32
ACTN1-205ENST00000538545 MEPEQ9NQ76 525 aaPredicted RBP13.03□□□□□ -0.32
ACTN1-205ENST00000538545 OCIAD1Q9NX40 245 aa13.03□□□□□ -0.32
ACTN1-205ENST00000538545 TRAV27A0A087WT01 109 aa13.03□□□□□ -0.32
ACTN1-205ENST00000538545 IGHV5-10-1A0A0J9YXX1 117 aa13.03□□□□□ -0.32
ACTN1-205ENST00000538545 IFI30P13284 250 aa13.03□□□□□ -0.32
ACTN1-205ENST00000538545 FXYD6P3P58550 94 aa13.03□□□□□ -0.32
ACTN1-205ENST00000538545 NFATC3Q12968 1075 aa13.03□□□□□ -0.32
ACTN1-205ENST00000538545 NR0B2Q15466 257 aa13.03□□□□□ -0.32
ACTN1-205ENST00000538545 CD226Q15762 336 aa13.03□□□□□ -0.32
ACTN1-205ENST00000538545 CTF1Q16619 201 aa13.03□□□□□ -0.32
ACTN1-205ENST00000538545 PHF19Q5T6S3 580 aa13.03□□□□□ -0.32
ACTN1-205ENST00000538545 TMEM71Q6P5X7 295 aa13.03□□□□□ -0.32
ACTN1-205ENST00000538545 ZCCHC12Q6PEW1 402 aa13.03□□□□□ -0.32
ACTN1-205ENST00000538545 WDR74Q6RFH5 385 aaPredicted RBP13.03□□□□□ -0.32
ACTN1-205ENST00000538545 CBLN3Q6UW01 205 aa13.03□□□□□ -0.32
ACTN1-205ENST00000538545 RANBP3LQ86VV4 465 aaPredicted RBP13.03□□□□□ -0.32
ACTN1-205ENST00000538545 NDNFQ8TB73 568 aa13.03□□□□□ -0.32
ACTN1-205ENST00000538545 PIGXQ8TBF5 258 aa13.03□□□□□ -0.32
ACTN1-205ENST00000538545 SLC2A12Q8TD20 617 aa13.03□□□□□ -0.32
ACTN1-205ENST00000538545 SAMD8Q96LT4 415 aa13.03□□□□□ -0.32
ACTN1-205ENST00000538545 TUBA1CQ9BQE3 449 aa13.03□□□□□ -0.32
ACTN1-205ENST00000538545 ZNF768Q9H5H4 540 aaKnown RBP13.03□□□□□ -0.32
ACTN1-205ENST00000538545 DNAJB12Q9NXW2 375 aaKnown RBP13.03□□□□□ -0.32
ACTN1-205ENST00000538545 LRRTM2O43300 516 aa13.02□□□□□ -0.33
ACTN1-205ENST00000538545 LYPD3O95274 346 aa13.02□□□□□ -0.33
ACTN1-205ENST00000538545 ADORA3P0DMS8 318 aa13.02□□□□□ -0.33
ACTN1-205ENST00000538545 ACAA2P42765 397 aaKnown RBP13.02□□□□□ -0.33
ACTN1-205ENST00000538545 RHAGQ02094 409 aa13.02□□□□□ -0.33
ACTN1-205ENST00000538545 POGLUT1Q8NBL1 392 aa13.02□□□□□ -0.33
ACTN1-205ENST00000538545 BBS1Q8NFJ9 593 aa13.02□□□□□ -0.33
ACTN1-205ENST00000538545 OR51A7Q8NH64 312 aa13.02□□□□□ -0.33
ACTN1-205ENST00000538545 CCDC74BQ96LY2 380 aa13.02□□□□□ -0.33
ACTN1-205ENST00000538545 ADOQ96SZ5 270 aa13.02□□□□□ -0.33
ACTN1-205ENST00000538545 DOK1Q99704 481 aa13.02□□□□□ -0.33
ACTN1-205ENST00000538545 TRIM45Q9H8W5 580 aaPredicted RBP13.02□□□□□ -0.33
ACTN1-205ENST00000538545 CLN6Q9NWW5 311 aa13.02□□□□□ -0.33
ACTN1-205ENST00000538545 PNMA8CA0A1B0GUJ8 204 aa13.02□□□□□ -0.33
ACTN1-205ENST00000538545 A0A1B0GWA3 101 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms