RNA–Protein interactions for RNA: ENST00000538475.5

USP28-207, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 3

Gene USP28, Length 1,081 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-207ENST00000538475 CRYZQ08257 329 aaKnown RBP6.26□□□□□ -1.41
USP28-207ENST00000538475 PDE7AQ13946 482 aa6.26□□□□□ -1.41
USP28-207ENST00000538475 FGL2Q14314 439 aa6.26□□□□□ -1.41
USP28-207ENST00000538475 LRRC32Q14392 662 aa6.26□□□□□ -1.41
USP28-207ENST00000538475 CHRNA6Q15825 494 aa6.26□□□□□ -1.41
USP28-207ENST00000538475 KCNMB1Q16558 191 aa6.26□□□□□ -1.41
USP28-207ENST00000538475 ZNF528Q3MIS6 628 aa6.26□□□□□ -1.41
USP28-207ENST00000538475 Q3ZCU0 254 aa6.26□□□□□ -1.41
USP28-207ENST00000538475 SYTL3Q4VX76 610 aa6.26□□□□□ -1.41
USP28-207ENST00000538475 SGO1Q5FBB7 561 aa6.26□□□□□ -1.41
USP28-207ENST00000538475 FBXO48Q5FWF7 155 aa6.26□□□□□ -1.41
USP28-207ENST00000538475 FAM209BQ5JX69 171 aa6.26□□□□□ -1.41
USP28-207ENST00000538475 AVPI1Q5T686 147 aa6.26□□□□□ -1.41
USP28-207ENST00000538475 PGBD2Q6P3X8 592 aa6.26□□□□□ -1.41
USP28-207ENST00000538475 ZNF783Q6ZMS7 281 aa6.26□□□□□ -1.41
USP28-207ENST00000538475 TMEM91Q6ZNR0 172 aa6.26□□□□□ -1.41
USP28-207ENST00000538475 FAM83HQ6ZRV2 1179 aaPredicted RBP6.26□□□□□ -1.41
USP28-207ENST00000538475 MOB3CQ70IA8 216 aa6.26□□□□□ -1.41
USP28-207ENST00000538475 KANSL1Q7Z3B3 1105 aa6.26□□□□□ -1.41
USP28-207ENST00000538475 PLEKHH3Q7Z736 793 aa6.26□□□□□ -1.41
USP28-207ENST00000538475 STX12Q86Y82 276 aa6.26□□□□□ -1.41
USP28-207ENST00000538475 PIANPQ8IYJ0 282 aa6.26□□□□□ -1.41
USP28-207ENST00000538475 DTWD2Q8NBA8 298 aa6.26□□□□□ -1.41
USP28-207ENST00000538475 MDGA1Q8NFP4 955 aa6.26□□□□□ -1.41
USP28-207ENST00000538475 OR6C4Q8NGE1 309 aa6.26□□□□□ -1.41
USP28-207ENST00000538475 OR52J3Q8NH60 311 aa6.26□□□□□ -1.41
USP28-207ENST00000538475 OR1S1Q8NH92 325 aa6.26□□□□□ -1.41
USP28-207ENST00000538475 RAET1EQ8TD07 263 aa6.26□□□□□ -1.41
USP28-207ENST00000538475 CXorf40AQ8TE69 158 aa6.26□□□□□ -1.41
USP28-207ENST00000538475 GLYATL2Q8WU03 294 aa6.26□□□□□ -1.41
USP28-207ENST00000538475 EDAQ92838 391 aa6.26□□□□□ -1.41
USP28-207ENST00000538475 RNFT2Q96EX2 444 aa6.26□□□□□ -1.41
USP28-207ENST00000538475 APIPQ96GX9 242 aa6.26□□□□□ -1.41
USP28-207ENST00000538475 ZNF764Q96H86 408 aaPredicted RBP6.26□□□□□ -1.41
USP28-207ENST00000538475 LRR1Q96L50 414 aa6.26□□□□□ -1.41
USP28-207ENST00000538475 KLHL5Q96PQ7 755 aa6.26□□□□□ -1.41
USP28-207ENST00000538475 ZNF607Q96SK3 696 aa6.26□□□□□ -1.41
USP28-207ENST00000538475 MTERF1Q99551 399 aaKnown RBP6.26□□□□□ -1.41
USP28-207ENST00000538475 TREX2Q9BQ50 279 aaPredicted RBP6.26□□□□□ -1.41
USP28-207ENST00000538475 PTDSS2Q9BVG9 487 aa6.26□□□□□ -1.41
USP28-207ENST00000538475 ZDHHC5Q9C0B5 715 aa6.26□□□□□ -1.41
USP28-207ENST00000538475 CIPCQ9C0C6 399 aa6.26□□□□□ -1.41
USP28-207ENST00000538475 SPATC1LQ9H0A9 340 aa6.26□□□□□ -1.41
USP28-207ENST00000538475 C20orf85Q9H1P6 137 aa6.26□□□□□ -1.41
USP28-207ENST00000538475 REEP4Q9H6H4 257 aa6.26□□□□□ -1.41
USP28-207ENST00000538475 CACYBPQ9HB71 228 aaKnown RBP6.26□□□□□ -1.41
USP28-207ENST00000538475 MYOZ2Q9NPC6 264 aa6.26□□□□□ -1.41
USP28-207ENST00000538475 SLC35C2Q9NQQ7 365 aa6.26□□□□□ -1.41
USP28-207ENST00000538475 POLE3Q9NRF9 147 aa6.26□□□□□ -1.41
USP28-207ENST00000538475 RASL12Q9NYN1 266 aa6.26□□□□□ -1.41
USP28-207ENST00000538475 IL17CQ9P0M4 197 aa6.26□□□□□ -1.41
USP28-207ENST00000538475 PIPOXQ9P0Z9 390 aa6.26□□□□□ -1.41
USP28-207ENST00000538475 STOX2Q9P2F5 926 aaPredicted RBP6.26□□□□□ -1.41
USP28-207ENST00000538475 MYEF2Q9P2K5 600 aaKnown RBP6.26□□□□□ -1.41
USP28-207ENST00000538475 CPNE7Q9UBL6 633 aa6.26□□□□□ -1.41
USP28-207ENST00000538475 MGAT4CQ9UBM8 478 aa6.26□□□□□ -1.41
USP28-207ENST00000538475 ICKQ9UPZ9 632 aa6.26□□□□□ -1.41
USP28-207ENST00000538475 ENTPD4Q9Y227 616 aa6.26□□□□□ -1.41
USP28-207ENST00000538475 CARHSP1Q9Y2V2 147 aaKnown RBP6.26□□□□□ -1.41
USP28-207ENST00000538475 PPP2R3BQ9Y5P8 575 aa6.26□□□□□ -1.41
USP28-207ENST00000538475 LOC105369274A0A096LPK9 316 aa6.25□□□□□ -1.41
USP28-207ENST00000538475 UBE2QL1A1L167 161 aa6.25□□□□□ -1.41
USP28-207ENST00000538475 PRAMEF25A6NGN4 478 aa6.25□□□□□ -1.41
USP28-207ENST00000538475 ANXA2P2A6NMY6 339 aa6.25□□□□□ -1.41
USP28-207ENST00000538475 GABRR3A8MPY1 467 aa6.25□□□□□ -1.41
USP28-207ENST00000538475 C5orf58C9J3I9 102 aa6.25□□□□□ -1.41
USP28-207ENST00000538475 H3BN98 237 aa6.25□□□□□ -1.41
USP28-207ENST00000538475 GABARAPH6UMI1 98 aa6.25□□□□□ -1.41
USP28-207ENST00000538475 PHYHO14832 338 aa6.25□□□□□ -1.41
USP28-207ENST00000538475 TO15178 435 aa6.25□□□□□ -1.41
USP28-207ENST00000538475 RNF13O43567 381 aa6.25□□□□□ -1.41
USP28-207ENST00000538475 PCDH7O60245 1069 aa6.25□□□□□ -1.41
USP28-207ENST00000538475 SUSD5O60279 629 aa6.25□□□□□ -1.41
USP28-207ENST00000538475 LCMT2O60294 686 aaKnown RBP6.25□□□□□ -1.41
USP28-207ENST00000538475 OR10H3O60404 316 aa6.25□□□□□ -1.41
USP28-207ENST00000538475 EIF1BO60739 113 aaKnown RBP6.25□□□□□ -1.41
USP28-207ENST00000538475 CDC123O75794 336 aaPredicted RBP6.25□□□□□ -1.41
USP28-207ENST00000538475 VNN2O95498 520 aa6.25□□□□□ -1.41
USP28-207ENST00000538475 IGLV3-27P01718 113 aa6.25□□□□□ -1.41
USP28-207ENST00000538475 TP53P04637 393 aaPredicted RBP6.25□□□□□ -1.41
USP28-207ENST00000538475 ALDOBP05062 364 aa6.25□□□□□ -1.41
USP28-207ENST00000538475 LAMP1P11279 417 aa6.25□□□□□ -1.41
USP28-207ENST00000538475 EPORP19235 508 aa6.25□□□□□ -1.41
USP28-207ENST00000538475 CXCL2P19875 107 aa6.25□□□□□ -1.41
USP28-207ENST00000538475 TYMPP19971 482 aa6.25□□□□□ -1.41
USP28-207ENST00000538475 PVALBP20472 110 aaPredicted RBP6.25□□□□□ -1.41
USP28-207ENST00000538475 SSTR2P30874 369 aa6.25□□□□□ -1.41
USP28-207ENST00000538475 FAUP35544 74 aaKnown RBP6.25□□□□□ -1.41
USP28-207ENST00000538475 PMELP40967 661 aa6.25□□□□□ -1.41
USP28-207ENST00000538475 EIF1P41567 113 aaKnown RBP6.25□□□□□ -1.41
USP28-207ENST00000538475 RPL35P42766 123 aaKnown RBP6.25□□□□□ -1.41
USP28-207ENST00000538475 CRATP43155 626 aa6.25□□□□□ -1.41
USP28-207ENST00000538475 RABGGTBP53611 331 aa6.25□□□□□ -1.41
USP28-207ENST00000538475 CDH4P55283 916 aa6.25□□□□□ -1.41
USP28-207ENST00000538475 SCAND1P57086 179 aa6.25□□□□□ -1.41
USP28-207ENST00000538475 CD81P60033 236 aa6.25□□□□□ -1.41
USP28-207ENST00000538475 RAB5BP61020 215 aa6.25□□□□□ -1.41
USP28-207ENST00000538475 MC2RQ01718 297 aa6.25□□□□□ -1.41
USP28-207ENST00000538475 LGALS3BPQ08380 585 aa6.25□□□□□ -1.41
USP28-207ENST00000538475 HTR4Q13639 388 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms