RNA–Protein interactions for RNA: ENST00000538266.5

SNHG1-208, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 347 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-208ENST00000538266 FEN1P39748 380 aaKnown RBP3.99□□□□□ -1.77
SNHG1-208ENST00000538266 RPL5P46777 297 aaKnown RBP3.99□□□□□ -1.77
SNHG1-208ENST00000538266 STT3AP46977 705 aa3.99□□□□□ -1.77
SNHG1-208ENST00000538266 XKP51811 444 aa3.99□□□□□ -1.77
SNHG1-208ENST00000538266 PGDP52209 483 aa3.99□□□□□ -1.77
SNHG1-208ENST00000538266 NCBP2P52298 156 aaKnown RBP eCLIP3.99□□□□□ -1.77
SNHG1-208ENST00000538266 HNRNPFP52597 415 aaKnown RBP3.99□□□□□ -1.77
SNHG1-208ENST00000538266 DIO3P55073 304 aa3.99□□□□□ -1.77
SNHG1-208ENST00000538266 AQP4P55087 323 aa3.99□□□□□ -1.77
SNHG1-208ENST00000538266 NME5P56597 212 aa3.99□□□□□ -1.77
SNHG1-208ENST00000538266 CLDN8P56748 225 aa3.99□□□□□ -1.77
SNHG1-208ENST00000538266 HSPB3Q12988 150 aa3.99□□□□□ -1.77
SNHG1-208ENST00000538266 AIMP2Q13155 320 aaKnown RBP3.99□□□□□ -1.77
SNHG1-208ENST00000538266 EXT1Q16394 746 aa3.99□□□□□ -1.77
SNHG1-208ENST00000538266 DEFB109BQ30KR1 87 aa3.99□□□□□ -1.77
SNHG1-208ENST00000538266 FAM174BQ3ZCQ3 159 aa3.99□□□□□ -1.77
SNHG1-208ENST00000538266 DCAF10Q5QP82 559 aa3.99□□□□□ -1.77
SNHG1-208ENST00000538266 ATP1A1-AS1Q5TC04 95 aa3.99□□□□□ -1.77
SNHG1-208ENST00000538266 METTL21CQ5VZV1 264 aa3.99□□□□□ -1.77
SNHG1-208ENST00000538266 TMEM198Q66K66 360 aa3.99□□□□□ -1.77
SNHG1-208ENST00000538266 B3GNTL1Q67FW5 361 aaPredicted RBP3.99□□□□□ -1.77
SNHG1-208ENST00000538266 PLAG1Q6DJT9 500 aa3.99□□□□□ -1.77
SNHG1-208ENST00000538266 FAM71E1Q6IPT2 247 aa3.99□□□□□ -1.77
SNHG1-208ENST00000538266 ZFP1Q6P2D0 407 aa3.99□□□□□ -1.77
SNHG1-208ENST00000538266 INO80CQ6PI98 192 aaPredicted RBP3.99□□□□□ -1.77
SNHG1-208ENST00000538266 PAPD4Q6PIY7 484 aaKnown RBP3.99□□□□□ -1.77
SNHG1-208ENST00000538266 KIRREL2Q6UWL6 708 aa3.99□□□□□ -1.77
SNHG1-208ENST00000538266 UGT2A3Q6UWM9 527 aa3.99□□□□□ -1.77
SNHG1-208ENST00000538266 B3GNT6Q6ZMB0 384 aa3.99□□□□□ -1.77
SNHG1-208ENST00000538266 NDUFAF7Q7L592 441 aa3.99□□□□□ -1.77
SNHG1-208ENST00000538266 SZRD1Q7Z422 152 aa3.99□□□□□ -1.77
SNHG1-208ENST00000538266 OR4N5Q8IXE1 308 aa3.99□□□□□ -1.77
SNHG1-208ENST00000538266 MMP21Q8N119 569 aa3.99□□□□□ -1.77
SNHG1-208ENST00000538266 FBXW8Q8N3Y1 598 aa3.99□□□□□ -1.77
SNHG1-208ENST00000538266 KRTCAP2Q8N6L1 136 aa3.99□□□□□ -1.77
SNHG1-208ENST00000538266 NATD1Q8N6N6 113 aa3.99□□□□□ -1.77
SNHG1-208ENST00000538266 PLPP5Q8NEB5 264 aa3.99□□□□□ -1.77
SNHG1-208ENST00000538266 VPS37AQ8NEZ2 397 aa3.99□□□□□ -1.77
SNHG1-208ENST00000538266 B3GNT7Q8NFL0 401 aa3.99□□□□□ -1.77
SNHG1-208ENST00000538266 OR11G2Q8NGC1 345 aa3.99□□□□□ -1.77
SNHG1-208ENST00000538266 OR14A16Q8NHC5 309 aa3.99□□□□□ -1.77
SNHG1-208ENST00000538266 DNAJB14Q8TBM8 379 aa3.99□□□□□ -1.77
SNHG1-208ENST00000538266 APOBEC4Q8WW27 367 aaKnown RBP3.99□□□□□ -1.77
SNHG1-208ENST00000538266 ITFG2Q969R8 447 aa3.99□□□□□ -1.77
SNHG1-208ENST00000538266 ANKRD9Q96BM1 317 aaPredicted RBP3.99□□□□□ -1.77
SNHG1-208ENST00000538266 TESCQ96BS2 214 aa3.99□□□□□ -1.77
SNHG1-208ENST00000538266 C8orf44Q96CB5 159 aa3.99□□□□□ -1.77
SNHG1-208ENST00000538266 CCDC124Q96CT7 223 aaKnown RBP3.99□□□□□ -1.77
SNHG1-208ENST00000538266 ZBED6CLQ96FA7 236 aaPredicted RBP3.99□□□□□ -1.77
SNHG1-208ENST00000538266 ZNF764Q96H86 408 aaPredicted RBP3.99□□□□□ -1.77
SNHG1-208ENST00000538266 FBXL20Q96IG2 436 aa3.99□□□□□ -1.77
SNHG1-208ENST00000538266 BOD1Q96IK1 185 aa3.99□□□□□ -1.77
SNHG1-208ENST00000538266 MAELQ96JY0 434 aaKnown RBP3.99□□□□□ -1.77
SNHG1-208ENST00000538266 EGLN2Q96KS0 407 aa3.99□□□□□ -1.77
SNHG1-208ENST00000538266 MARK4Q96L34 752 aa3.99□□□□□ -1.77
SNHG1-208ENST00000538266 FCRL1Q96LA6 429 aa3.99□□□□□ -1.77
SNHG1-208ENST00000538266 OR52B2Q96RD2 323 aa3.99□□□□□ -1.77
SNHG1-208ENST00000538266 EBF4Q9BQW3 602 aa3.99□□□□□ -1.77
SNHG1-208ENST00000538266 CNPPD1Q9BV87 410 aa3.99□□□□□ -1.77
SNHG1-208ENST00000538266 OR8D2Q9GZM6 311 aa3.99□□□□□ -1.77
SNHG1-208ENST00000538266 ZNF700Q9H0M5 742 aa3.99□□□□□ -1.77
SNHG1-208ENST00000538266 ING2Q9H160 280 aa3.99□□□□□ -1.77
SNHG1-208ENST00000538266 ZNF160Q9HCG1 818 aa3.99□□□□□ -1.77
SNHG1-208ENST00000538266 NECTIN3Q9NQS3 549 aa3.99□□□□□ -1.77
SNHG1-208ENST00000538266 SDR39U1Q9NRG7 319 aaPredicted RBP3.99□□□□□ -1.77
SNHG1-208ENST00000538266 TAS2R7Q9NYW3 318 aa3.99□□□□□ -1.77
SNHG1-208ENST00000538266 C5AR2Q9P296 337 aa3.99□□□□□ -1.77
SNHG1-208ENST00000538266 TEKT2Q9UIF3 430 aa3.99□□□□□ -1.77
SNHG1-208ENST00000538266 ZDHHC8Q9ULC8 765 aa3.99□□□□□ -1.77
SNHG1-208ENST00000538266 RAB26Q9ULW5 256 aa3.99□□□□□ -1.77
SNHG1-208ENST00000538266 PCDHGB4Q9UN71 923 aa3.99□□□□□ -1.77
SNHG1-208ENST00000538266 HS3ST3B1Q9Y662 390 aa3.99□□□□□ -1.77
SNHG1-208ENST00000538266 GMEB1Q9Y692 573 aa3.99□□□□□ -1.77
SNHG1-208ENST00000538266 CACNA1AO00555 2505 aa3.99□□□□□ -1.77
SNHG1-208ENST00000538266 SEC16AO15027 2179 aa3.99□□□□□ -1.77
SNHG1-208ENST00000538266 LOC102723996A0A087X1L8 192 aa3.98□□□□□ -1.77
SNHG1-208ENST00000538266 TRBV11-1A0A0K0K1C0 115 aa3.98□□□□□ -1.77
SNHG1-208ENST00000538266 CENPVL1A0A0U1RR11 272 aa3.98□□□□□ -1.77
SNHG1-208ENST00000538266 A0A1W2PQ72 361 aa3.98□□□□□ -1.77
SNHG1-208ENST00000538266 UNC119BA6NIH7 251 aa3.98□□□□□ -1.77
SNHG1-208ENST00000538266 SAGE2PA6NJ88 616 aa3.98□□□□□ -1.77
SNHG1-208ENST00000538266 ARGFXA6NJG6 315 aa3.98□□□□□ -1.77
SNHG1-208ENST00000538266 WASHC1A8K0Z3 465 aa3.98□□□□□ -1.77
SNHG1-208ENST00000538266 ZNF785A8K8V0 405 aa3.98□□□□□ -1.77
SNHG1-208ENST00000538266 GABRR3A8MPY1 467 aa3.98□□□□□ -1.77
SNHG1-208ENST00000538266 VSTM5A8MXK1 200 aa3.98□□□□□ -1.77
SNHG1-208ENST00000538266 H3BNX3 289 aa3.98□□□□□ -1.77
SNHG1-208ENST00000538266 MKRN2OSH3BPM6 223 aa3.98□□□□□ -1.77
SNHG1-208ENST00000538266 TAF4O00268 1085 aa3.98□□□□□ -1.77
SNHG1-208ENST00000538266 NR5A2O00482 541 aa3.98□□□□□ -1.77
SNHG1-208ENST00000538266 ANGPT2O15123 496 aa3.98□□□□□ -1.77
SNHG1-208ENST00000538266 DENRO43583 198 aaKnown RBP3.98□□□□□ -1.77
SNHG1-208ENST00000538266 PRAMEF2O60811 474 aa3.98□□□□□ -1.77
SNHG1-208ENST00000538266 ABHD16AO95870 558 aa3.98□□□□□ -1.77
SNHG1-208ENST00000538266 CLPTM1O96005 669 aa3.98□□□□□ -1.77
SNHG1-208ENST00000538266 IL6P05231 212 aa3.98□□□□□ -1.77
SNHG1-208ENST00000538266 SERPINA7P05543 415 aa3.98□□□□□ -1.77
SNHG1-208ENST00000538266 ABCB1P08183 1280 aaPredicted RBP3.98□□□□□ -1.77
SNHG1-208ENST00000538266 ALDOCP09972 364 aaKnown RBP3.98□□□□□ -1.77
SNHG1-208ENST00000538266 LAMP1P11279 417 aa3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms