RNA–Protein interactions for RNA: ENST00000536708.6

CDK5RAP3-202, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2 BASIC

Gene CDK5RAP3, Length 1,975 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-202ENST00000536708 COX10Q12887 443 aa12.02□□□□□ -0.49
CDK5RAP3-202ENST00000536708 SLC13A2Q13183 592 aa12.02□□□□□ -0.49
CDK5RAP3-202ENST00000536708 OCLNQ16625 522 aa12.02□□□□□ -0.49
CDK5RAP3-202ENST00000536708 SLC25A30Q5SVS4 291 aa12.02□□□□□ -0.49
CDK5RAP3-202ENST00000536708 PGBD2Q6P3X8 592 aa12.02□□□□□ -0.49
CDK5RAP3-202ENST00000536708 DHRS13Q6UX07 377 aa12.02□□□□□ -0.49
CDK5RAP3-202ENST00000536708 GDPGP1Q6ZNW5 385 aa12.02□□□□□ -0.49
CDK5RAP3-202ENST00000536708 NLGN4XQ8N0W4 816 aa12.02□□□□□ -0.49
CDK5RAP3-202ENST00000536708 HTRA1Q92743 480 aa12.02□□□□□ -0.49
CDK5RAP3-202ENST00000536708 RAB8BQ92930 207 aa12.02□□□□□ -0.49
CDK5RAP3-202ENST00000536708 OR5M11Q96RB7 305 aa12.02□□□□□ -0.49
CDK5RAP3-202ENST00000536708 DPYSL5Q9BPU6 564 aa12.02□□□□□ -0.49
CDK5RAP3-202ENST00000536708 TREX2Q9BQ50 279 aaPredicted RBP12.02□□□□□ -0.49
CDK5RAP3-202ENST00000536708 NDC1Q9BTX1 674 aa12.02□□□□□ -0.49
CDK5RAP3-202ENST00000536708 SERTAD3Q9UJW9 196 aa12.02□□□□□ -0.49
CDK5RAP3-202ENST00000536708 A4GNTQ9UNA3 340 aa12.02□□□□□ -0.49
CDK5RAP3-202ENST00000536708 LSM2Q9Y333 95 aaKnown RBP12.02□□□□□ -0.49
CDK5RAP3-202ENST00000536708 PEX16Q9Y5Y5 336 aa12.02□□□□□ -0.49
CDK5RAP3-202ENST00000536708 SDK2Q58EX2 2172 aa12.02□□□□□ -0.49
CDK5RAP3-202ENST00000536708 FAM47E-STBD1D6RA91 191 aa12.01□□□□□ -0.49
CDK5RAP3-202ENST00000536708 M0R129 80 aa12.01□□□□□ -0.49
CDK5RAP3-202ENST00000536708 SNPHO15079 494 aa12.01□□□□□ -0.49
CDK5RAP3-202ENST00000536708 ENTPD6O75354 484 aa12.01□□□□□ -0.49
CDK5RAP3-202ENST00000536708 SCRG1O75711 98 aa12.01□□□□□ -0.49
CDK5RAP3-202ENST00000536708 KCNK2O95069 426 aa12.01□□□□□ -0.49
CDK5RAP3-202ENST00000536708 SNX4O95219 450 aa12.01□□□□□ -0.49
CDK5RAP3-202ENST00000536708 TP53P04637 393 aaPredicted RBP12.01□□□□□ -0.49
CDK5RAP3-202ENST00000536708 DBTP11182 482 aaKnown RBP12.01□□□□□ -0.49
CDK5RAP3-202ENST00000536708 SPNP16150 400 aa12.01□□□□□ -0.49
CDK5RAP3-202ENST00000536708 ZNF28P17035 718 aa12.01□□□□□ -0.49
CDK5RAP3-202ENST00000536708 NTSP30990 170 aa12.01□□□□□ -0.49
CDK5RAP3-202ENST00000536708 AVPR1BP47901 424 aa12.01□□□□□ -0.49
CDK5RAP3-202ENST00000536708 CRISP3P54108 245 aa12.01□□□□□ -0.49
CDK5RAP3-202ENST00000536708 ACY1Q03154 408 aa12.01□□□□□ -0.49
CDK5RAP3-202ENST00000536708 SF3B4Q15427 424 aaKnown RBP eCLIP12.01□□□□□ -0.492e-8■■■■□ 19.3
CDK5RAP3-202ENST00000536708 PRAMEF8Q5VWM4 474 aa12.01□□□□□ -0.49
CDK5RAP3-202ENST00000536708 PRAMEF7Q5VXH5 474 aa12.01□□□□□ -0.49
CDK5RAP3-202ENST00000536708 SZRD1Q7Z422 152 aa12.01□□□□□ -0.49
CDK5RAP3-202ENST00000536708 CCDC116Q8IYX3 515 aa12.01□□□□□ -0.49
CDK5RAP3-202ENST00000536708 SIMC1Q8NDZ2 872 aa12.01□□□□□ -0.49
CDK5RAP3-202ENST00000536708 OR8J1Q8NGP2 316 aa12.01□□□□□ -0.49
CDK5RAP3-202ENST00000536708 OR9A2Q8NGT5 310 aa12.01□□□□□ -0.49
CDK5RAP3-202ENST00000536708 OR51Q1Q8NH59 317 aa12.01□□□□□ -0.49
CDK5RAP3-202ENST00000536708 BBS10Q8TAM1 723 aa12.01□□□□□ -0.49
CDK5RAP3-202ENST00000536708 SFXN5Q8TD22 340 aa12.01□□□□□ -0.49
CDK5RAP3-202ENST00000536708 CHAC2Q8WUX2 184 aa12.01□□□□□ -0.49
CDK5RAP3-202ENST00000536708 SLC35G5Q96KT7 338 aa12.01□□□□□ -0.49
CDK5RAP3-202ENST00000536708 ZNF681Q96N22 645 aa12.01□□□□□ -0.49
CDK5RAP3-202ENST00000536708 TRNT1Q96Q11 434 aaKnown RBP12.01□□□□□ -0.49
CDK5RAP3-202ENST00000536708 BBS4Q96RK4 519 aa12.01□□□□□ -0.49
CDK5RAP3-202ENST00000536708 CENPOQ9BU64 300 aa12.01□□□□□ -0.49
CDK5RAP3-202ENST00000536708 TPK1Q9H3S4 243 aa12.01□□□□□ -0.49
CDK5RAP3-202ENST00000536708 MOV10Q9HCE1 1003 aaKnown RBP12.01□□□□□ -0.49
CDK5RAP3-202ENST00000536708 CTSFQ9UBX1 484 aa12.01□□□□□ -0.49
CDK5RAP3-202ENST00000536708 SEC14L3Q9UDX4 400 aa12.01□□□□□ -0.49
CDK5RAP3-202ENST00000536708 RARRES3Q9UL19 164 aa12.01□□□□□ -0.49
CDK5RAP3-202ENST00000536708 ENTPD4Q9Y227 616 aa12.01□□□□□ -0.49
CDK5RAP3-202ENST00000536708 PTPRBP23467 1997 aa12.01□□□□□ -0.49
CDK5RAP3-202ENST00000536708 SPAARA0A1B0GVQ0 90 aa12.01□□□□□ -0.49
CDK5RAP3-202ENST00000536708 A0A1B0GX78 115 aa12.01□□□□□ -0.49
CDK5RAP3-202ENST00000536708 ASNA1O43681 348 aa12.01□□□□□ -0.49
CDK5RAP3-202ENST00000536708 SLC28A2O43868 658 aa12.01□□□□□ -0.49
CDK5RAP3-202ENST00000536708 OR10H3O60404 316 aa12.01□□□□□ -0.49
CDK5RAP3-202ENST00000536708 DLGAP3O95886 979 aa12.01□□□□□ -0.49
CDK5RAP3-202ENST00000536708 SCG5P05408 212 aa12.01□□□□□ -0.49
CDK5RAP3-202ENST00000536708 OR12D1P0DN82 309 aa12.01□□□□□ -0.49
CDK5RAP3-202ENST00000536708 RNH1P13489 461 aaKnown RBP12.01□□□□□ -0.49
CDK5RAP3-202ENST00000536708 MAOAP21397 527 aa12.01□□□□□ -0.49
CDK5RAP3-202ENST00000536708 PPP2R1BP30154 601 aa12.01□□□□□ -0.49
CDK5RAP3-202ENST00000536708 S100A5P33763 92 aa12.01□□□□□ -0.49
CDK5RAP3-202ENST00000536708 CASP3P42574 277 aa12.01□□□□□ -0.49
CDK5RAP3-202ENST00000536708 XKP51811 444 aa12.01□□□□□ -0.49
CDK5RAP3-202ENST00000536708 BTG2P78543 158 aa12.01□□□□□ -0.49
CDK5RAP3-202ENST00000536708 IFITM2Q01629 132 aa12.01□□□□□ -0.49
CDK5RAP3-202ENST00000536708 TRIP6Q15654 476 aaKnown RBP12.01□□□□□ -0.49
CDK5RAP3-202ENST00000536708 SYPL1Q16563 259 aa12.01□□□□□ -0.49
CDK5RAP3-202ENST00000536708 TMEM107Q6UX40 140 aa12.01□□□□□ -0.49
CDK5RAP3-202ENST00000536708 KRT73Q86Y46 540 aa12.01□□□□□ -0.49
CDK5RAP3-202ENST00000536708 PRSS58Q8IYP2 241 aa12.01□□□□□ -0.49
CDK5RAP3-202ENST00000536708 POC5Q8NA72 575 aa12.01□□□□□ -0.49
CDK5RAP3-202ENST00000536708 AGBL5Q8NDL9 886 aa12.01□□□□□ -0.49
CDK5RAP3-202ENST00000536708 SLC7A13Q8TCU3 470 aa12.01□□□□□ -0.49
CDK5RAP3-202ENST00000536708 OTUB1Q96FW1 271 aaPredicted RBP12.01□□□□□ -0.49
CDK5RAP3-202ENST00000536708 SPATA5L1Q9BVQ7 753 aa12.01□□□□□ -0.49
CDK5RAP3-202ENST00000536708 OR51I1Q9H343 314 aa12.01□□□□□ -0.49
CDK5RAP3-202ENST00000536708 ENAMQ9NRM1 1142 aa12.01□□□□□ -0.49
CDK5RAP3-202ENST00000536708 SEMA3GQ9NS98 782 aa12.01□□□□□ -0.49
CDK5RAP3-202ENST00000536708 CFL2Q9Y281 166 aa12.01□□□□□ -0.49
CDK5RAP3-202ENST00000536708 RPL36Q9Y3U8 105 aaKnown RBP12.01□□□□□ -0.49
CDK5RAP3-202ENST00000536708 SPTBN2O15020 2390 aa12□□□□□ -0.49
CDK5RAP3-202ENST00000536708 A0A075B6Q4 140 aa12□□□□□ -0.49
CDK5RAP3-202ENST00000536708 LOC100506127A0A0U1RQW1 187 aa12□□□□□ -0.49
CDK5RAP3-202ENST00000536708 A0A1W2PNU3 283 aaPredicted RBP12□□□□□ -0.49
CDK5RAP3-202ENST00000536708 DLL1O00548 723 aa12□□□□□ -0.49
CDK5RAP3-202ENST00000536708 TBX1O43435 398 aa12□□□□□ -0.49
CDK5RAP3-202ENST00000536708 PTTG1O95997 202 aa12□□□□□ -0.49
CDK5RAP3-202ENST00000536708 POU1F1P28069 291 aa12□□□□□ -0.49
CDK5RAP3-202ENST00000536708 TLX1P31314 330 aaPredicted RBP12□□□□□ -0.49
CDK5RAP3-202ENST00000536708 ETV5P41161 510 aa12□□□□□ -0.49
CDK5RAP3-202ENST00000536708 MC3RP41968 323 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms