RNA–Protein interactions for RNA: ENST00000534406.1

SIPA1-210, Transcript of signal-induced proliferation-associated 1, humanhuman

TSL 3

Gene SIPA1, Length 351 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1-210ENST00000534406 SERINC4A6NH21 518 aa22■■□□□ 1.11
SIPA1-210ENST00000534406 SUSD5O60279 629 aa22■■□□□ 1.11
SIPA1-210ENST00000534406 ARAFP10398 606 aa22■■□□□ 1.11
SIPA1-210ENST00000534406 SELPLGQ14242 412 aa22■■□□□ 1.11
SIPA1-210ENST00000534406 CYP51A1Q16850 503 aa22■■□□□ 1.11
SIPA1-210ENST00000534406 OR8J3Q8NGG0 315 aa22■■□□□ 1.11
SIPA1-210ENST00000534406 PMM1Q92871 262 aa22■■□□□ 1.11
SIPA1-210ENST00000534406 MAL2Q969L2 176 aa22■■□□□ 1.11
SIPA1-210ENST00000534406 SH3YL1Q96HL8 342 aaPredicted RBP22■■□□□ 1.11
SIPA1-210ENST00000534406 SH3GL1Q99961 368 aa22■■□□□ 1.11
SIPA1-210ENST00000534406 TREX2Q9BQ50 279 aaPredicted RBP22■■□□□ 1.11
SIPA1-210ENST00000534406 SUCOQ9UBS9 1254 aaKnown RBP22■■□□□ 1.11
SIPA1-210ENST00000534406 HELZ2Q9BYK8 2649 aaKnown RBP22■■□□□ 1.11
SIPA1-210ENST00000534406 A0A1B0GTH9 108 aa21.99■■□□□ 1.11
SIPA1-210ENST00000534406 A0A1B0GVC2 190 aa21.99■■□□□ 1.11
SIPA1-210ENST00000534406 C5orf58C9J3I9 102 aa21.99■■□□□ 1.11
SIPA1-210ENST00000534406 AQP7O14520 342 aa21.99■■□□□ 1.11
SIPA1-210ENST00000534406 HCRTR2O43614 444 aa21.99■■□□□ 1.11
SIPA1-210ENST00000534406 UBL4AP11441 157 aa21.99■■□□□ 1.11
SIPA1-210ENST00000534406 ABOP16442 354 aa21.99■■□□□ 1.11
SIPA1-210ENST00000534406 DPP4P27487 766 aa21.99■■□□□ 1.11
SIPA1-210ENST00000534406 MSX1P28360 303 aa21.99■■□□□ 1.11
SIPA1-210ENST00000534406 DSCR4P56555 118 aaPredicted RBP21.99■■□□□ 1.11
SIPA1-210ENST00000534406 MAPK14Q16539 360 aa21.99■■□□□ 1.11
SIPA1-210ENST00000534406 EIPR1Q53HC9 387 aa21.99■■□□□ 1.11
SIPA1-210ENST00000534406 PRAMEF8Q5VWM4 474 aa21.99■■□□□ 1.11
SIPA1-210ENST00000534406 PRAMEF7Q5VXH5 474 aa21.99■■□□□ 1.11
SIPA1-210ENST00000534406 YRDCQ86U90 279 aaKnown RBP21.99■■□□□ 1.11
SIPA1-210ENST00000534406 CHERPQ8IWX8 916 aaKnown RBP21.99■■□□□ 1.11
SIPA1-210ENST00000534406 METTL25Q8N6Q8 603 aa21.99■■□□□ 1.11
SIPA1-210ENST00000534406 OR14L1PQ8NHC6 308 aa21.99■■□□□ 1.11
SIPA1-210ENST00000534406 B4GALNT2Q8NHY0 566 aa21.99■■□□□ 1.11
SIPA1-210ENST00000534406 NEIL3Q8TAT5 605 aa21.99■■□□□ 1.11
SIPA1-210ENST00000534406 QRSL1Q9H0R6 528 aaKnown RBP21.99■■□□□ 1.11
SIPA1-210ENST00000534406 TMEM38AQ9H6F2 299 aa21.99■■□□□ 1.11
SIPA1-210ENST00000534406 MTHFD2LQ9H903 347 aaPredicted RBP21.99■■□□□ 1.11
SIPA1-210ENST00000534406 CACYBPQ9HB71 228 aaKnown RBP21.99■■□□□ 1.11
SIPA1-210ENST00000534406 TAS2R10Q9NYW0 307 aa21.99■■□□□ 1.11
SIPA1-210ENST00000534406 L3MBTL1Q9Y468 752 aa21.99■■□□□ 1.11
SIPA1-210ENST00000534406 DSPPQ9NZW4 1301 aa21.99■■□□□ 1.11
SIPA1-210ENST00000534406 HIVEP3Q5T1R4 2406 aa21.98■■□□□ 1.11
SIPA1-210ENST00000534406 UBR5O95071 2799 aaPredicted RBP21.98■■□□□ 1.11
SIPA1-210ENST00000534406 AGAP5A6NIR3 686 aa21.98■■□□□ 1.11
SIPA1-210ENST00000534406 GTPBP1O00178 669 aaKnown RBP21.98■■□□□ 1.11
SIPA1-210ENST00000534406 NDUFAB1O14561 156 aa21.98■■□□□ 1.11
SIPA1-210ENST00000534406 AIM2O14862 343 aa21.98■■□□□ 1.11
SIPA1-210ENST00000534406 GMFGO60234 142 aa21.98■■□□□ 1.11
SIPA1-210ENST00000534406 SLC19A2O60779 497 aa21.98■■□□□ 1.11
SIPA1-210ENST00000534406 WISP1O95388 367 aa21.98■■□□□ 1.11
SIPA1-210ENST00000534406 RPS4Y1P22090 263 aaKnown RBP21.98■■□□□ 1.11
SIPA1-210ENST00000534406 GCKP35557 465 aa21.98■■□□□ 1.11
SIPA1-210ENST00000534406 ZNF117Q03924 483 aa21.98■■□□□ 1.11
SIPA1-210ENST00000534406 FGFBP1Q14512 234 aa21.98■■□□□ 1.11
SIPA1-210ENST00000534406 ZNF800Q2TB10 664 aaPredicted RBP eCLIP21.98■■□□□ 1.11
SIPA1-210ENST00000534406 RPS26P11Q5JNZ5 115 aaPredicted RBP21.98■■□□□ 1.11
SIPA1-210ENST00000534406 WIPI1Q5MNZ9 446 aaPredicted RBP21.98■■□□□ 1.11
SIPA1-210ENST00000534406 FAM91A1Q658Y4 838 aa21.98■■□□□ 1.11
SIPA1-210ENST00000534406 NANOGP8Q6NSW7 305 aa21.98■■□□□ 1.11
SIPA1-210ENST00000534406 EIF3MQ7L2H7 374 aaKnown RBP21.98■■□□□ 1.11
SIPA1-210ENST00000534406 FGD2Q7Z6J4 655 aa21.98■■□□□ 1.11
SIPA1-210ENST00000534406 HMGN2P46Q86SG4 172 aa21.98■■□□□ 1.11
SIPA1-210ENST00000534406 PEX5LQ8IYB4 626 aa21.98■■□□□ 1.11
SIPA1-210ENST00000534406 NFKBIDQ8NI38 313 aa21.98■■□□□ 1.11
SIPA1-210ENST00000534406 BBS10Q8TAM1 723 aa21.98■■□□□ 1.11
SIPA1-210ENST00000534406 C1GALT1C1Q96EU7 318 aa21.98■■□□□ 1.11
SIPA1-210ENST00000534406 KAT8Q9H7Z6 458 aaKnown RBP21.98■■□□□ 1.11
SIPA1-210ENST00000534406 NANOGQ9H9S0 305 aa21.98■■□□□ 1.11
SIPA1-210ENST00000534406 EFCAB1Q9HAE3 211 aa21.98■■□□□ 1.11
SIPA1-210ENST00000534406 SLC35A3Q9Y2D2 325 aa21.98■■□□□ 1.11
SIPA1-210ENST00000534406 C15orf38-AP3S2A0A0A6YYH1 394 aa21.97■■□□□ 1.11
SIPA1-210ENST00000534406 A0A0G2JPF8 293 aa21.97■■□□□ 1.11
SIPA1-210ENST00000534406 OR14I1A6ND48 311 aa21.97■■□□□ 1.11
SIPA1-210ENST00000534406 HNRNPCL2B2RXH8 293 aa21.97■■□□□ 1.11
SIPA1-210ENST00000534406 HNRNPCL3B7ZW38 293 aa21.97■■□□□ 1.11
SIPA1-210ENST00000534406 HNRNPCL1O60812 293 aaKnown RBP21.97■■□□□ 1.11
SIPA1-210ENST00000534406 CSTAP01040 98 aa21.97■■□□□ 1.11
SIPA1-210ENST00000534406 DBIP07108 87 aaKnown RBP21.97■■□□□ 1.11
SIPA1-210ENST00000534406 HNRNPCL4P0DMR1 293 aa21.97■■□□□ 1.11
SIPA1-210ENST00000534406 PTGS2P35354 604 aa21.97■■□□□ 1.11
SIPA1-210ENST00000534406 NUDT2P50583 147 aa21.97■■□□□ 1.11
SIPA1-210ENST00000534406 SUMO3P55854 103 aaPredicted RBP21.97■■□□□ 1.11
SIPA1-210ENST00000534406 CDK6Q00534 326 aa21.97■■□□□ 1.11
SIPA1-210ENST00000534406 NDUFAF6Q330K2 333 aa21.97■■□□□ 1.11
SIPA1-210ENST00000534406 ARPINQ7Z6K5 226 aa21.97■■□□□ 1.11
SIPA1-210ENST00000534406 IFNEQ86WN2 208 aa21.97■■□□□ 1.11
SIPA1-210ENST00000534406 TMCO5AQ8N6Q1 288 aa21.97■■□□□ 1.11
SIPA1-210ENST00000534406 BCAS4Q8TDM0 211 aa21.97■■□□□ 1.11
SIPA1-210ENST00000534406 WDR60Q8WVS4 1066 aa21.97■■□□□ 1.11
SIPA1-210ENST00000534406 ZG16BQ96DA0 208 aa21.97■■□□□ 1.11
SIPA1-210ENST00000534406 BCL2L10Q9HD36 194 aa21.97■■□□□ 1.11
SIPA1-210ENST00000534406 ST6GALNAC1Q9NSC7 600 aaPredicted RBP21.97■■□□□ 1.11
SIPA1-210ENST00000534406 SPRR3Q9UBC9 169 aa21.97■■□□□ 1.11
SIPA1-210ENST00000534406 OSGIN2Q9Y236 505 aa21.97■■□□□ 1.11
SIPA1-210ENST00000534406 CARD8Q9Y2G2 431 aa21.97■■□□□ 1.11
SIPA1-210ENST00000534406 MRPS18CQ9Y3D5 142 aaKnown RBP21.97■■□□□ 1.11
SIPA1-210ENST00000534406 PCNX3Q9H6A9 2034 aa21.97■■□□□ 1.11
SIPA1-210ENST00000534406 FAM47E-STBD1D6RA91 191 aa21.96■■□□□ 1.11
SIPA1-210ENST00000534406 ZNF264O43296 627 aa21.96■■□□□ 1.11
SIPA1-210ENST00000534406 OIP5O43482 229 aa21.96■■□□□ 1.11
SIPA1-210ENST00000534406 HK1P19367 917 aa21.96■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms