RNA–Protein interactions for RNA: ENST00000533820.5

CAPN1-226, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-226ENST00000533820 TMEM91Q6ZNR0 172 aa18.04■□□□□ 0.48
CAPN1-226ENST00000533820 SLC37A3Q8NCC5 494 aa18.04■□□□□ 0.48
CAPN1-226ENST00000533820 TMEM43Q9BTV4 400 aa18.04■□□□□ 0.48
CAPN1-226ENST00000533820 KLHL1Q9NR64 748 aa18.04■□□□□ 0.48
CAPN1-226ENST00000533820 LIPT1Q9Y234 373 aa18.04■□□□□ 0.48
CAPN1-226ENST00000533820 NOSIPQ9Y314 301 aaKnown RBP18.04■□□□□ 0.48
CAPN1-226ENST00000533820 ZNF98A6NK75 572 aa18.04■□□□□ 0.48
CAPN1-226ENST00000533820 INMT-MINDY4F8WBC2 141 aa18.04■□□□□ 0.48
CAPN1-226ENST00000533820 ARSBP15848 533 aa18.04■□□□□ 0.48
CAPN1-226ENST00000533820 IFNGR2P38484 337 aa18.04■□□□□ 0.48
CAPN1-226ENST00000533820 OR10A3P58181 314 aa18.04■□□□□ 0.48
CAPN1-226ENST00000533820 TMEM81Q6P7N7 255 aa18.04■□□□□ 0.48
CAPN1-226ENST00000533820 SHISA5Q8N114 240 aa18.04■□□□□ 0.48
CAPN1-226ENST00000533820 MS4A6EQ96DS6 147 aa18.04■□□□□ 0.48
CAPN1-226ENST00000533820 DPH1Q9BZG8 443 aa18.04■□□□□ 0.48
CAPN1-226ENST00000533820 CAPN10Q9HC96 672 aa18.04■□□□□ 0.48
CAPN1-226ENST00000533820 MRPS30Q9NP92 439 aaKnown RBP18.04■□□□□ 0.48
CAPN1-226ENST00000533820 SPHK1Q9NYA1 384 aa18.04■□□□□ 0.48
CAPN1-226ENST00000533820 MARK1Q9P0L2 795 aa18.04■□□□□ 0.48
CAPN1-226ENST00000533820 SLC7A7Q9UM01 511 aa18.04■□□□□ 0.48
CAPN1-226ENST00000533820 TRBV23OR9-2A0A075B6M9 112 aa18.03■□□□□ 0.48
CAPN1-226ENST00000533820 A0A0G2JPF8 293 aa18.03■□□□□ 0.48
CAPN1-226ENST00000533820 EDDM13A0A1B0GTR0 161 aa18.03■□□□□ 0.48
CAPN1-226ENST00000533820 KDM4EB2RXH2 506 aaPredicted RBP18.03■□□□□ 0.48
CAPN1-226ENST00000533820 HNRNPCL2B2RXH8 293 aa18.03■□□□□ 0.48
CAPN1-226ENST00000533820 HNRNPCL3B7ZW38 293 aa18.03■□□□□ 0.48
CAPN1-226ENST00000533820 TBX19O60806 448 aa18.03■□□□□ 0.48
CAPN1-226ENST00000533820 GKN3PP0CG01 181 aa18.03■□□□□ 0.48
CAPN1-226ENST00000533820 TRAPPC2P0DI81 140 aa18.03■□□□□ 0.48
CAPN1-226ENST00000533820 TRAPPC2BP0DI82 140 aa18.03■□□□□ 0.48
CAPN1-226ENST00000533820 HNRNPCL4P0DMR1 293 aa18.03■□□□□ 0.48
CAPN1-226ENST00000533820 DRD2P14416 443 aa18.03■□□□□ 0.48
CAPN1-226ENST00000533820 SHC1P29353 583 aa18.03■□□□□ 0.48
CAPN1-226ENST00000533820 FGF9P31371 208 aaPredicted RBP18.03■□□□□ 0.48
CAPN1-226ENST00000533820 DSG2Q14126 1118 aa18.03■□□□□ 0.48
CAPN1-226ENST00000533820 AGERQ15109 404 aa18.03■□□□□ 0.48
CAPN1-226ENST00000533820 AADACL4Q5VUY2 407 aa18.03■□□□□ 0.48
CAPN1-226ENST00000533820 VASNQ6EMK4 673 aa18.03■□□□□ 0.48
CAPN1-226ENST00000533820 MTFR2Q6P444 385 aa18.03■□□□□ 0.48
CAPN1-226ENST00000533820 PRSS42Q7Z5A4 293 aa18.03■□□□□ 0.48
CAPN1-226ENST00000533820 ARIH2OSQ8N7S6 290 aa18.03■□□□□ 0.48
CAPN1-226ENST00000533820 MRPL43Q8N983 215 aaKnown RBP18.03■□□□□ 0.48
CAPN1-226ENST00000533820 ZNF485Q8NCK3 441 aa18.03■□□□□ 0.48
CAPN1-226ENST00000533820 OR10H4Q8NGA5 316 aa18.03■□□□□ 0.48
CAPN1-226ENST00000533820 HCAR1Q9BXC0 346 aa18.03■□□□□ 0.48
CAPN1-226ENST00000533820 OR51V1Q9H2C8 321 aa18.03■□□□□ 0.48
CAPN1-226ENST00000533820 BCL2L10Q9HD36 194 aa18.03■□□□□ 0.48
CAPN1-226ENST00000533820 F5P12259 2224 aa18.03■□□□□ 0.48
CAPN1-226ENST00000533820 NPIPA5A0A0B4J1W7 369 aa18.03■□□□□ 0.48
CAPN1-226ENST00000533820 A0A1W2PRG6 482 aa18.03■□□□□ 0.48
CAPN1-226ENST00000533820 NPIPA7E9PJI5 369 aa18.03■□□□□ 0.48
CAPN1-226ENST00000533820 NPIPA8P0DM63 369 aa18.03■□□□□ 0.48
CAPN1-226ENST00000533820 CSNK2A2P19784 350 aaPredicted RBP18.03■□□□□ 0.48
CAPN1-226ENST00000533820 ERP29P30040 261 aaKnown RBP18.03■□□□□ 0.48
CAPN1-226ENST00000533820 RFX3P48380 749 aa18.03■□□□□ 0.48
CAPN1-226ENST00000533820 SRP9P49458 86 aaKnown RBP18.03■□□□□ 0.48
CAPN1-226ENST00000533820 ABATP80404 500 aa18.03■□□□□ 0.48
CAPN1-226ENST00000533820 RASSF6Q6ZTQ3 369 aa18.03■□□□□ 0.48
CAPN1-226ENST00000533820 TMEM99Q8N816 258 aa18.03■□□□□ 0.48
CAPN1-226ENST00000533820 SAMD12Q8N8I0 201 aa18.03■□□□□ 0.48
CAPN1-226ENST00000533820 KCT2Q8NC54 265 aa18.03■□□□□ 0.48
CAPN1-226ENST00000533820 SUSD6Q92537 303 aa18.03■□□□□ 0.48
CAPN1-226ENST00000533820 RFKQ969G6 155 aa18.03■□□□□ 0.48
CAPN1-226ENST00000533820 CAMK1GQ96NX5 476 aa18.03■□□□□ 0.48
CAPN1-226ENST00000533820 ASB4Q9Y574 426 aa18.03■□□□□ 0.48
CAPN1-226ENST00000533820 HCN1O60741 890 aa18.02■□□□□ 0.48
CAPN1-226ENST00000533820 ADH1CP00326 375 aa18.02■□□□□ 0.48
CAPN1-226ENST00000533820 SPTBP11277 2137 aa18.02■□□□□ 0.48
CAPN1-226ENST00000533820 ATP5A1P25705 553 aaKnown RBP18.02■□□□□ 0.48
CAPN1-226ENST00000533820 GZMKP49863 264 aa18.02■□□□□ 0.48
CAPN1-226ENST00000533820 BTN3A2P78410 334 aa18.02■□□□□ 0.48
CAPN1-226ENST00000533820 SLC3A1Q07837 685 aa18.02■□□□□ 0.48
CAPN1-226ENST00000533820 KIAA1211LQ6NV74 962 aa18.02■□□□□ 0.48
CAPN1-226ENST00000533820 GDF7Q7Z4P5 450 aa18.02■□□□□ 0.48
CAPN1-226ENST00000533820 ADAMTS15Q8TE58 950 aa18.02■□□□□ 0.48
CAPN1-226ENST00000533820 POF1BQ8WVV4 589 aa18.02■□□□□ 0.48
CAPN1-226ENST00000533820 ASB12Q8WXK4 309 aa18.02■□□□□ 0.48
CAPN1-226ENST00000533820 CDS1Q92903 461 aa18.02■□□□□ 0.48
CAPN1-226ENST00000533820 TAS2R7Q9NYW3 318 aa18.02■□□□□ 0.48
CAPN1-226ENST00000533820 CBLCQ9ULV8 474 aa18.02■□□□□ 0.48
CAPN1-226ENST00000533820 OR5F1O95221 314 aa18.02■□□□□ 0.48
CAPN1-226ENST00000533820 PRG2P13727 222 aa18.02■□□□□ 0.48
CAPN1-226ENST00000533820 PRR5P85299 388 aa18.02■□□□□ 0.48
CAPN1-226ENST00000533820 ARHGAP19Q14CB8 494 aa18.02■□□□□ 0.48
CAPN1-226ENST00000533820 PGGHGQ32M88 737 aa18.02■□□□□ 0.48
CAPN1-226ENST00000533820 EOGTQ5NDL2 527 aa18.02■□□□□ 0.48
CAPN1-226ENST00000533820 BCL2L15Q5TBC7 163 aa18.02■□□□□ 0.48
CAPN1-226ENST00000533820 FAM111BQ6SJ93 734 aa18.02■□□□□ 0.48
CAPN1-226ENST00000533820 RPTNQ6XPR3 784 aa18.02■□□□□ 0.48
CAPN1-226ENST00000533820 ZNF765Q7L2R6 523 aa18.02■□□□□ 0.48
CAPN1-226ENST00000533820 LINC00471Q8N535 108 aa18.02■□□□□ 0.48
CAPN1-226ENST00000533820 FANK1Q8TC84 345 aa18.02■□□□□ 0.48
CAPN1-226ENST00000533820 SLC41A3Q96GZ6 507 aa18.02■□□□□ 0.48
CAPN1-226ENST00000533820 PRDM7Q9NQW5 492 aa18.02■□□□□ 0.48
CAPN1-226ENST00000533820 ING3Q9NXR8 418 aa18.02■□□□□ 0.48
CAPN1-226ENST00000533820 B3GNT2Q9NY97 397 aa18.02■□□□□ 0.48
CAPN1-226ENST00000533820 NUP210Q8TEM1 1887 aaPredicted RBP18.02■□□□□ 0.48
CAPN1-226ENST00000533820 KIF26AQ9ULI4 1882 aaPredicted RBP18.02■□□□□ 0.48
CAPN1-226ENST00000533820 CLEC3AO75596 197 aa18.02■□□□□ 0.47
CAPN1-226ENST00000533820 ERGP11308 486 aa18.02■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms