RNA–Protein interactions for RNA: ENST00000533526.1

ATM-220, Transcript of ATM serine/threonine kinase, humanhuman

TSL 1 (best)

Gene ATM, Length 234 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-220ENST00000533526 ADAM12O43184 909 aa1.76□□□□□ -2.13
ATM-220ENST00000533526 EFNA2O43921 213 aa1.76□□□□□ -2.13
ATM-220ENST00000533526 STX11O75558 287 aa1.76□□□□□ -2.13
ATM-220ENST00000533526 MT-ATP6P00846 226 aa1.76□□□□□ -2.13
ATM-220ENST00000533526 TIMP1P01033 207 aa1.76□□□□□ -2.13
ATM-220ENST00000533526 ALPPP05187 535 aa1.76□□□□□ -2.13
ATM-220ENST00000533526 HBQ1P09105 142 aa1.76□□□□□ -2.13
ATM-220ENST00000533526 OR8U8P0C7N1 319 aa1.76□□□□□ -2.13
ATM-220ENST00000533526 RRASP10301 218 aa1.76□□□□□ -2.13
ATM-220ENST00000533526 ALPPL2P10696 532 aa1.76□□□□□ -2.13
ATM-220ENST00000533526 CLUP10909 449 aa1.76□□□□□ -2.13
ATM-220ENST00000533526 PDHBP11177 359 aa1.76□□□□□ -2.13
ATM-220ENST00000533526 SERPINA2P20848 420 aa1.76□□□□□ -2.13
ATM-220ENST00000533526 ATP5A1P25705 553 aaKnown RBP1.76□□□□□ -2.13
ATM-220ENST00000533526 AXLP30530 894 aa1.76□□□□□ -2.13
ATM-220ENST00000533526 HPDP32754 393 aaPredicted RBP1.76□□□□□ -2.13
ATM-220ENST00000533526 STARP49675 285 aa1.76□□□□□ -2.13
ATM-220ENST00000533526 NOVA1P51513 510 aaKnown RBP1.76□□□□□ -2.13
ATM-220ENST00000533526 SLC26A5P58743 744 aa1.76□□□□□ -2.13
ATM-220ENST00000533526 NTHL1P78549 312 aa1.76□□□□□ -2.13
ATM-220ENST00000533526 EGFEM1PQ0D2K5 195 aa1.76□□□□□ -2.13
ATM-220ENST00000533526 FUT7Q11130 342 aa1.76□□□□□ -2.13
ATM-220ENST00000533526 EXOSC2Q13868 293 aaKnown RBP1.76□□□□□ -2.13
ATM-220ENST00000533526 SLC10A5Q5PT55 438 aa1.76□□□□□ -2.13
ATM-220ENST00000533526 PVRIGQ6DKI7 326 aa1.76□□□□□ -2.13
ATM-220ENST00000533526 Q6P435 159 aa1.76□□□□□ -2.13
ATM-220ENST00000533526 SLC39A4Q6P5W5 647 aa1.76□□□□□ -2.13
ATM-220ENST00000533526 CYS1Q717R9 158 aa1.76□□□□□ -2.13
ATM-220ENST00000533526 SNX32Q86XE0 403 aa1.76□□□□□ -2.13
ATM-220ENST00000533526 KDM8Q8N371 416 aa1.76□□□□□ -2.13
ATM-220ENST00000533526 DCAF4L2Q8NA75 395 aa1.76□□□□□ -2.13
ATM-220ENST00000533526 MINDY2Q8NBR6 621 aa1.76□□□□□ -2.13
ATM-220ENST00000533526 ZBTB44Q8NCP5 570 aa1.76□□□□□ -2.13
ATM-220ENST00000533526 DNAJA4Q8WW22 397 aaPredicted RBP1.76□□□□□ -2.13
ATM-220ENST00000533526 UPRTQ96BW1 309 aa1.76□□□□□ -2.13
ATM-220ENST00000533526 SPXQ9BT56 116 aa1.76□□□□□ -2.13
ATM-220ENST00000533526 POLR3FQ9H1D9 316 aaPredicted RBP1.76□□□□□ -2.13
ATM-220ENST00000533526 SLC25A51Q9H1U9 297 aa1.76□□□□□ -2.13
ATM-220ENST00000533526 OR51J1Q9H342 316 aa1.76□□□□□ -2.13
ATM-220ENST00000533526 ZDHHC11Q9H8X9 412 aa1.76□□□□□ -2.13
ATM-220ENST00000533526 GPN2Q9H9Y4 310 aaPredicted RBP1.76□□□□□ -2.13
ATM-220ENST00000533526 ATP6V1HQ9UI12 483 aa1.76□□□□□ -2.13
ATM-220ENST00000533526 RAB26Q9ULW5 256 aa1.76□□□□□ -2.13
ATM-220ENST00000533526 NUDCQ9Y266 331 aa1.76□□□□□ -2.13
ATM-220ENST00000533526 AP4B1Q9Y6B7 739 aa1.76□□□□□ -2.13
ATM-220ENST00000533526 PLEKHG1Q9ULL1 1385 aa1.75□□□□□ -2.13
ATM-220ENST00000533526 IGHV1OR15-1A0A075B7D0 117 aa1.75□□□□□ -2.13
ATM-220ENST00000533526 TRIM64A6NGJ6 449 aa1.75□□□□□ -2.13
ATM-220ENST00000533526 TUBAL3A6NHL2 446 aa1.75□□□□□ -2.13
ATM-220ENST00000533526 TRIM64BA6NI03 449 aa1.75□□□□□ -2.13
ATM-220ENST00000533526 OR6C65A6NJZ3 312 aa1.75□□□□□ -2.13
ATM-220ENST00000533526 TOM1L1O75674 476 aa1.75□□□□□ -2.13
ATM-220ENST00000533526 IGHV3-48P01763 117 aa1.75□□□□□ -2.13
ATM-220ENST00000533526 CSF2P04141 144 aa1.75□□□□□ -2.13
ATM-220ENST00000533526 ETS1P14921 441 aa1.75□□□□□ -2.13
ATM-220ENST00000533526 XRCC1P18887 633 aaPredicted RBP1.75□□□□□ -2.13
ATM-220ENST00000533526 CCNE1P24864 410 aa1.75□□□□□ -2.13
ATM-220ENST00000533526 NMT1P30419 496 aaKnown RBP1.75□□□□□ -2.13
ATM-220ENST00000533526 UGT1A5P35504 534 aa1.75□□□□□ -2.13
ATM-220ENST00000533526 ASMTP46597 345 aa1.75□□□□□ -2.13
ATM-220ENST00000533526 CAV2P51636 162 aa1.75□□□□□ -2.13
ATM-220ENST00000533526 NUP107P57740 925 aa1.75□□□□□ -2.13
ATM-220ENST00000533526 SLC10A7Q0GE19 358 aa1.75□□□□□ -2.13
ATM-220ENST00000533526 PDK1Q15118 436 aa1.75□□□□□ -2.13
ATM-220ENST00000533526 IRGCQ6NXR0 463 aa1.75□□□□□ -2.13
ATM-220ENST00000533526 WDR74Q6RFH5 385 aaPredicted RBP1.75□□□□□ -2.13
ATM-220ENST00000533526 LCA5Q86VQ0 697 aa1.75□□□□□ -2.13
ATM-220ENST00000533526 EFCAB13Q8IY85 973 aa1.75□□□□□ -2.13
ATM-220ENST00000533526 ELMOD2Q8IZ81 293 aa1.75□□□□□ -2.13
ATM-220ENST00000533526 OR56B1Q8NGI3 324 aa1.75□□□□□ -2.13
ATM-220ENST00000533526 FBXO30Q8TB52 745 aa1.75□□□□□ -2.13
ATM-220ENST00000533526 C7orf33Q8WU49 177 aa1.75□□□□□ -2.13
ATM-220ENST00000533526 SLC5A11Q8WWX8 675 aa1.75□□□□□ -2.13
ATM-220ENST00000533526 NOL4LQ96MY1 436 aaPredicted RBP1.75□□□□□ -2.13
ATM-220ENST00000533526 VSTM2LQ96N03 204 aa1.75□□□□□ -2.13
ATM-220ENST00000533526 PLEKHF1Q96S99 279 aa1.75□□□□□ -2.13
ATM-220ENST00000533526 NRTNQ99748 197 aa1.75□□□□□ -2.13
ATM-220ENST00000533526 TXN2Q99757 166 aa1.75□□□□□ -2.13
ATM-220ENST00000533526 TMEM121Q9BTD3 319 aa1.75□□□□□ -2.13
ATM-220ENST00000533526 TBCDQ9BTW9 1192 aa1.75□□□□□ -2.13
ATM-220ENST00000533526 SRXN1Q9BYN0 137 aa1.75□□□□□ -2.13
ATM-220ENST00000533526 SLC25A39Q9BZJ4 359 aaPredicted RBP1.75□□□□□ -2.13
ATM-220ENST00000533526 SH2D2AQ9NP31 389 aa1.75□□□□□ -2.13
ATM-220ENST00000533526 MRPL39Q9NYK5 338 aaKnown RBP1.75□□□□□ -2.13
ATM-220ENST00000533526 LCMT1Q9UIC8 334 aa1.75□□□□□ -2.13
ATM-220ENST00000533526 IFT52Q9Y366 437 aa1.75□□□□□ -2.13
ATM-220ENST00000533526 CDH10Q9Y6N8 788 aa1.75□□□□□ -2.13
ATM-220ENST00000533526 OBSCNQ5VST9 7968 aa1.75□□□□□ -2.13
ATM-220ENST00000533526 CDC42BPBQ9Y5S2 1711 aa1.74□□□□□ -2.13
ATM-220ENST00000533526 CARMIL1Q5VZK9 1371 aa1.74□□□□□ -2.13
ATM-220ENST00000533526 ABCC4O15439 1325 aa1.74□□□□□ -2.13
ATM-220ENST00000533526 A0A0J9YXY3 114 aa1.74□□□□□ -2.13
ATM-220ENST00000533526 LOC100131303A0A0U1RQF7 123 aa1.74□□□□□ -2.13
ATM-220ENST00000533526 RNF103-CHMP3A0A140T963 221 aa1.74□□□□□ -2.13
ATM-220ENST00000533526 FAM230AA0A1W2PPH8 454 aa1.74□□□□□ -2.13
ATM-220ENST00000533526 ANKRD30BLA7E2S9 258 aa1.74□□□□□ -2.13
ATM-220ENST00000533526 MAGEB4O15481 346 aaPredicted RBP1.74□□□□□ -2.13
ATM-220ENST00000533526 ZNF264O43296 627 aa1.74□□□□□ -2.13
ATM-220ENST00000533526 SUPT7LO94864 414 aa1.74□□□□□ -2.13
ATM-220ENST00000533526 SNAPINO95295 136 aa1.74□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms