RNA–Protein interactions for RNA: ENST00000533242.1

NEDD8-207, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 1 (best)

Gene NEDD8, Length 2,300 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-207ENST00000533242 FOPNLQ96NB1 174 aa7.6□□□□□ -1.19
NEDD8-207ENST00000533242 DMRTA2Q96SC8 542 aa7.6□□□□□ -1.19
NEDD8-207ENST00000533242 PITX2Q99697 317 aa7.6□□□□□ -1.19
NEDD8-207ENST00000533242 SLC6A16Q9GZN6 736 aa7.6□□□□□ -1.19
NEDD8-207ENST00000533242 RAD21L1Q9H4I0 556 aa7.6□□□□□ -1.19
NEDD8-207ENST00000533242 SPATA7Q9P0W8 599 aa7.6□□□□□ -1.19
NEDD8-207ENST00000533242 KIF17Q9P2E2 1029 aa7.6□□□□□ -1.19
NEDD8-207ENST00000533242 RNF6Q9Y252 685 aa7.6□□□□□ -1.19
NEDD8-207ENST00000533242 SNX5Q9Y5X3 404 aa7.6□□□□□ -1.19
NEDD8-207ENST00000533242 GMEB1Q9Y692 573 aa7.6□□□□□ -1.19
NEDD8-207ENST00000533242 CSMD1Q96PZ7 3565 aa7.6□□□□□ -1.19
NEDD8-207ENST00000533242 PCNX1Q96RV3 2341 aa7.6□□□□□ -1.19
NEDD8-207ENST00000533242 WASHC1A8K0Z3 465 aa7.6□□□□□ -1.19
NEDD8-207ENST00000533242 NPIPA5E9PKD4 350 aa7.6□□□□□ -1.19
NEDD8-207ENST00000533242 E9PLN8 166 aa7.6□□□□□ -1.19
NEDD8-207ENST00000533242 H0YGG7 62 aa7.6□□□□□ -1.19
NEDD8-207ENST00000533242 FOXE1O00358 373 aaPredicted RBP7.6□□□□□ -1.19
NEDD8-207ENST00000533242 PLPP1O14494 284 aa7.6□□□□□ -1.19
NEDD8-207ENST00000533242 B4GALT2O60909 372 aa7.6□□□□□ -1.19
NEDD8-207ENST00000533242 NOL3O60936 208 aaKnown RBP7.6□□□□□ -1.19
NEDD8-207ENST00000533242 GABARAPO95166 117 aa7.6□□□□□ -1.19
NEDD8-207ENST00000533242 HOXB4P17483 251 aaPredicted RBP7.6□□□□□ -1.19
NEDD8-207ENST00000533242 TPP2P29144 1249 aaPredicted RBP7.6□□□□□ -1.19
NEDD8-207ENST00000533242 CMPK1P30085 196 aa7.6□□□□□ -1.19
NEDD8-207ENST00000533242 ART1P52961 327 aa7.6□□□□□ -1.19
NEDD8-207ENST00000533242 NUDT6P53370 316 aa7.6□□□□□ -1.19
NEDD8-207ENST00000533242 PNLIPRP1P54315 467 aa7.6□□□□□ -1.19
NEDD8-207ENST00000533242 ARF3P61204 181 aaPredicted RBP7.6□□□□□ -1.19
NEDD8-207ENST00000533242 TOP3AQ13472 1001 aaPredicted RBP7.6□□□□□ -1.19
NEDD8-207ENST00000533242 MOGQ16653 247 aa7.6□□□□□ -1.19
NEDD8-207ENST00000533242 RPS26P11Q5JNZ5 115 aaPredicted RBP7.6□□□□□ -1.19
NEDD8-207ENST00000533242 GARNL3Q5VVW2 1013 aa7.6□□□□□ -1.19
NEDD8-207ENST00000533242 TMEM236Q5W0B7 351 aa7.6□□□□□ -1.19
NEDD8-207ENST00000533242 FBXO42Q6P3S6 717 aa7.6□□□□□ -1.19
NEDD8-207ENST00000533242 IGFN1Q86VF2 1251 aa7.6□□□□□ -1.19
NEDD8-207ENST00000533242 TSPYL5Q86VY4 417 aaPredicted RBP7.6□□□□□ -1.19
NEDD8-207ENST00000533242 SIAH3Q8IW03 269 aa7.6□□□□□ -1.19
NEDD8-207ENST00000533242 BEST3Q8N1M1 668 aa7.6□□□□□ -1.19
NEDD8-207ENST00000533242 GHDCQ8N2G8 530 aa7.6□□□□□ -1.19
NEDD8-207ENST00000533242 ANKRD53Q8N9V6 530 aa7.6□□□□□ -1.19
NEDD8-207ENST00000533242 FBXO15Q8NCQ5 510 aaPredicted RBP7.6□□□□□ -1.19
NEDD8-207ENST00000533242 OR4C15Q8NGM1 316 aa7.6□□□□□ -1.19
NEDD8-207ENST00000533242 OR2A1Q8NGT9 310 aa7.6□□□□□ -1.19
NEDD8-207ENST00000533242 GOT1L1Q8NHS2 421 aaPredicted RBP7.6□□□□□ -1.19
NEDD8-207ENST00000533242 PROX1Q92786 737 aa7.6□□□□□ -1.19
NEDD8-207ENST00000533242 BORCS5Q969J3 196 aa7.6□□□□□ -1.19
NEDD8-207ENST00000533242 NRBF2Q96F24 287 aa7.6□□□□□ -1.19
NEDD8-207ENST00000533242 METTL2AQ96IZ6 378 aaKnown RBP7.6□□□□□ -1.19
NEDD8-207ENST00000533242 EPYCQ99645 322 aa7.6□□□□□ -1.19
NEDD8-207ENST00000533242 VKORC1Q9BQB6 163 aa7.6□□□□□ -1.19
NEDD8-207ENST00000533242 WFDC6Q9BQY6 131 aa7.6□□□□□ -1.19
NEDD8-207ENST00000533242 TMUB1Q9BVT8 246 aa7.6□□□□□ -1.19
NEDD8-207ENST00000533242 BHLHE41Q9C0J9 482 aaPredicted RBP7.6□□□□□ -1.19
NEDD8-207ENST00000533242 CXorf36Q9H7Y0 433 aa7.6□□□□□ -1.19
NEDD8-207ENST00000533242 ACOT13Q9NPJ3 140 aa7.6□□□□□ -1.19
NEDD8-207ENST00000533242 RHCGQ9UBD6 479 aa7.6□□□□□ -1.19
NEDD8-207ENST00000533242 MKL2Q9ULH7 1088 aa7.6□□□□□ -1.19
NEDD8-207ENST00000533242 NPIPA1Q9UND3 350 aa7.6□□□□□ -1.19
NEDD8-207ENST00000533242 A0A1W2PPV9 198 aa7.59□□□□□ -1.19
NEDD8-207ENST00000533242 FEZF1A0PJY2 475 aa7.59□□□□□ -1.19
NEDD8-207ENST00000533242 FAM221AA4D161 298 aa7.59□□□□□ -1.19
NEDD8-207ENST00000533242 FAM20BO75063 409 aa7.59□□□□□ -1.19
NEDD8-207ENST00000533242 C8orf89P0DMQ9 161 aa7.59□□□□□ -1.19
NEDD8-207ENST00000533242 POU2F1P14859 743 aa7.59□□□□□ -1.19
NEDD8-207ENST00000533242 CD46P15529 392 aa7.59□□□□□ -1.19
NEDD8-207ENST00000533242 ABOP16442 354 aa7.59□□□□□ -1.19
NEDD8-207ENST00000533242 PSMB9P28065 219 aa7.59□□□□□ -1.19
NEDD8-207ENST00000533242 TGFBR2P37173 567 aa7.59□□□□□ -1.19
NEDD8-207ENST00000533242 ARHGDIAP52565 204 aa7.59□□□□□ -1.19
NEDD8-207ENST00000533242 CRISP3P54108 245 aa7.59□□□□□ -1.19
NEDD8-207ENST00000533242 CDH12P55289 794 aa7.59□□□□□ -1.19
NEDD8-207ENST00000533242 SCARB2Q14108 478 aa7.59□□□□□ -1.19
NEDD8-207ENST00000533242 DUSP7Q16829 419 aa7.59□□□□□ -1.19
NEDD8-207ENST00000533242 EXOC3L2Q2M3D2 409 aa7.59□□□□□ -1.19
NEDD8-207ENST00000533242 ACER2Q5QJU3 275 aa7.59□□□□□ -1.19
NEDD8-207ENST00000533242 ANXA8L1Q5VT79 327 aa7.59□□□□□ -1.19
NEDD8-207ENST00000533242 PLAG1Q6DJT9 500 aa7.59□□□□□ -1.19
NEDD8-207ENST00000533242 TUBA3EQ6PEY2 450 aa7.59□□□□□ -1.19
NEDD8-207ENST00000533242 NCCRP1Q6ZVX7 275 aaPredicted RBP7.59□□□□□ -1.19
NEDD8-207ENST00000533242 METTL4Q8N3J2 472 aa7.59□□□□□ -1.19
NEDD8-207ENST00000533242 CSNK1A1LQ8N752 337 aa7.59□□□□□ -1.19
NEDD8-207ENST00000533242 TMEM178AQ8NBL3 297 aa7.59□□□□□ -1.19
NEDD8-207ENST00000533242 FAM98AQ8NCA5 519 aaKnown RBP7.59□□□□□ -1.19
NEDD8-207ENST00000533242 VPS37AQ8NEZ2 397 aa7.59□□□□□ -1.19
NEDD8-207ENST00000533242 METTL21AQ8WXB1 218 aa7.59□□□□□ -1.19
NEDD8-207ENST00000533242 PPCDCQ96CD2 204 aa7.59□□□□□ -1.19
NEDD8-207ENST00000533242 MMABQ96EY8 250 aaPredicted RBP7.59□□□□□ -1.19
NEDD8-207ENST00000533242 HRASLS5Q96KN8 279 aa7.59□□□□□ -1.19
NEDD8-207ENST00000533242 FRMD6Q96NE9 622 aa7.59□□□□□ -1.19
NEDD8-207ENST00000533242 ZNF300Q96RE9 604 aaPredicted RBP7.59□□□□□ -1.19
NEDD8-207ENST00000533242 UTP23Q9BRU9 249 aaKnown RBP7.59□□□□□ -1.19
NEDD8-207ENST00000533242 GABARAPL3Q9BY60 117 aa7.59□□□□□ -1.19
NEDD8-207ENST00000533242 ARMC7Q9H6L4 198 aa7.59□□□□□ -1.19
NEDD8-207ENST00000533242 CCDC177Q9NQR7 707 aaPredicted RBP7.59□□□□□ -1.19
NEDD8-207ENST00000533242 ADPRHL2Q9NX46 363 aa7.59□□□□□ -1.19
NEDD8-207ENST00000533242 TNFRSF11BO00300 401 aa7.58□□□□□ -1.2
NEDD8-207ENST00000533242 CDK2AP1O14519 115 aa7.58□□□□□ -1.2
NEDD8-207ENST00000533242 ADAM10O14672 748 aa7.58□□□□□ -1.2
NEDD8-207ENST00000533242 ASNA1O43681 348 aa7.58□□□□□ -1.2
NEDD8-207ENST00000533242 NADKO95544 446 aaPredicted RBP7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms