RNA–Protein interactions for RNA: ENST00000532935.5

CPSF1-210, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 506 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-210ENST00000532935 MBD3L3A6NE82 208 aaPredicted RBP13.9□□□□□ -0.18
CPSF1-210ENST00000532935 MBD3L5A6NJ08 208 aaPredicted RBP13.9□□□□□ -0.18
CPSF1-210ENST00000532935 SHOX2O60902 331 aaPredicted RBP13.9□□□□□ -0.18
CPSF1-210ENST00000532935 SLC22A3O75751 556 aa13.9□□□□□ -0.18
CPSF1-210ENST00000532935 TGDSO95455 350 aa13.9□□□□□ -0.18
CPSF1-210ENST00000532935 AK1P00568 194 aa13.9□□□□□ -0.18
CPSF1-210ENST00000532935 IL2RAP01589 272 aa13.9□□□□□ -0.18
CPSF1-210ENST00000532935 PEPDP12955 493 aa13.9□□□□□ -0.18
CPSF1-210ENST00000532935 MSX1P28360 303 aa13.9□□□□□ -0.18
CPSF1-210ENST00000532935 CHI3L1P36222 383 aaPredicted RBP13.9□□□□□ -0.18
CPSF1-210ENST00000532935 CASP9P55211 416 aa13.9□□□□□ -0.18
CPSF1-210ENST00000532935 LRRC74AQ0VAA2 488 aa13.9□□□□□ -0.18
CPSF1-210ENST00000532935 CD226Q15762 336 aa13.9□□□□□ -0.18
CPSF1-210ENST00000532935 BCL2A1Q16548 175 aa13.9□□□□□ -0.18
CPSF1-210ENST00000532935 FLYWCH1Q4VC44 716 aa13.9□□□□□ -0.18
CPSF1-210ENST00000532935 KLHL26Q53HC5 615 aa13.9□□□□□ -0.18
CPSF1-210ENST00000532935 SAXO2Q658L1 398 aa13.9□□□□□ -0.18
CPSF1-210ENST00000532935 ARSKQ6UWY0 536 aa13.9□□□□□ -0.18
CPSF1-210ENST00000532935 CHDHQ8NE62 594 aaPredicted RBP13.9□□□□□ -0.18
CPSF1-210ENST00000532935 OR5M1Q8NGP8 315 aa13.9□□□□□ -0.18
CPSF1-210ENST00000532935 MBD3L2Q8NHZ7 208 aaPredicted RBP13.9□□□□□ -0.18
CPSF1-210ENST00000532935 NEURL3Q96EH8 262 aa13.9□□□□□ -0.18
CPSF1-210ENST00000532935 SH3YL1Q96HL8 342 aaPredicted RBP13.9□□□□□ -0.18
CPSF1-210ENST00000532935 PANX1Q96RD7 426 aa13.9□□□□□ -0.18
CPSF1-210ENST00000532935 SDF2Q99470 211 aa13.9□□□□□ -0.18
CPSF1-210ENST00000532935 PIGQQ9BRB3 760 aa13.9□□□□□ -0.18
CPSF1-210ENST00000532935 SLC35A5Q9BS91 424 aa13.9□□□□□ -0.18
CPSF1-210ENST00000532935 OR51I1Q9H343 314 aa13.9□□□□□ -0.18
CPSF1-210ENST00000532935 SDR39U1Q9NRG7 319 aaPredicted RBP13.9□□□□□ -0.18
CPSF1-210ENST00000532935 ZIM2Q9NZV7 527 aa13.9□□□□□ -0.18
CPSF1-210ENST00000532935 ZNF337Q9Y3M9 751 aa13.9□□□□□ -0.18
CPSF1-210ENST00000532935 FBN2P35556 2912 aa13.9□□□□□ -0.18
CPSF1-210ENST00000532935 A0A087WZY1 265 aa13.89□□□□□ -0.19
CPSF1-210ENST00000532935 NPIPB9F8W1W9 429 aa13.89□□□□□ -0.19
CPSF1-210ENST00000532935 LINC01387J3KSC0 135 aa13.89□□□□□ -0.19
CPSF1-210ENST00000532935 AGR2O95994 175 aa13.89□□□□□ -0.19
CPSF1-210ENST00000532935 IL6P05231 212 aa13.89□□□□□ -0.19
CPSF1-210ENST00000532935 PRF1P14222 555 aa13.89□□□□□ -0.19
CPSF1-210ENST00000532935 POU3F2P20265 443 aaPredicted RBP13.89□□□□□ -0.19
CPSF1-210ENST00000532935 MDH1P40925 334 aaKnown RBP13.89□□□□□ -0.19
CPSF1-210ENST00000532935 CDKN2CP42773 168 aa13.89□□□□□ -0.19
CPSF1-210ENST00000532935 ATP12AP54707 1039 aa13.89□□□□□ -0.19
CPSF1-210ENST00000532935 TMEM44Q2T9K0 475 aa13.89□□□□□ -0.19
CPSF1-210ENST00000532935 SLC25A35Q3KQZ1 300 aa13.89□□□□□ -0.19
CPSF1-210ENST00000532935 ARHGAP11BQ3KRB8 267 aa13.89□□□□□ -0.19
CPSF1-210ENST00000532935 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.89□□□□□ -0.19
CPSF1-210ENST00000532935 TNFAIP8L2Q6P589 184 aaPredicted RBP13.89□□□□□ -0.19
CPSF1-210ENST00000532935 C16orf62Q7Z3J2 963 aa13.89□□□□□ -0.19
CPSF1-210ENST00000532935 ADGRE4PQ86SQ3 457 aa13.89□□□□□ -0.19
CPSF1-210ENST00000532935 MCEMP1Q8IX19 187 aa13.89□□□□□ -0.19
CPSF1-210ENST00000532935 TRIML2Q8N7C3 387 aa13.89□□□□□ -0.19
CPSF1-210ENST00000532935 C9orf106Q8NAJ2 232 aa13.89□□□□□ -0.19
CPSF1-210ENST00000532935 ACBD4Q8NC06 268 aa13.89□□□□□ -0.19
CPSF1-210ENST00000532935 B4GALNT2Q8NHY0 566 aa13.89□□□□□ -0.19
CPSF1-210ENST00000532935 PHOSPHO1Q8TCT1 267 aa13.89□□□□□ -0.19
CPSF1-210ENST00000532935 CKAP2Q8WWK9 683 aa13.89□□□□□ -0.19
CPSF1-210ENST00000532935 UCN2Q96RP3 112 aa13.89□□□□□ -0.19
CPSF1-210ENST00000532935 SPOCK3Q9BQ16 436 aa13.89□□□□□ -0.19
CPSF1-210ENST00000532935 INPP5KQ9BT40 448 aa13.89□□□□□ -0.19
CPSF1-210ENST00000532935 ENKD1Q9H0I2 346 aa13.89□□□□□ -0.19
CPSF1-210ENST00000532935 NPDC1Q9NQX5 325 aaPredicted RBP13.89□□□□□ -0.19
CPSF1-210ENST00000532935 EXD2Q9NVH0 621 aa13.89□□□□□ -0.19
CPSF1-210ENST00000532935 VDAC3Q9Y277 283 aa13.89□□□□□ -0.19
CPSF1-210ENST00000532935 CCDC154A6NI56 674 aa13.88□□□□□ -0.19
CPSF1-210ENST00000532935 CLCA1A8K7I4 914 aa13.88□□□□□ -0.19
CPSF1-210ENST00000532935 SHISA8B8ZZ34 492 aa13.88□□□□□ -0.19
CPSF1-210ENST00000532935 H3BML4 177 aa13.88□□□□□ -0.19
CPSF1-210ENST00000532935 H3BNH8 94 aa13.88□□□□□ -0.19
CPSF1-210ENST00000532935 DVL2O14641 736 aa13.88□□□□□ -0.19
CPSF1-210ENST00000532935 HCRTR2O43614 444 aa13.88□□□□□ -0.19
CPSF1-210ENST00000532935 STX11O75558 287 aa13.88□□□□□ -0.19
CPSF1-210ENST00000532935 C1QCP02747 245 aa13.88□□□□□ -0.19
CPSF1-210ENST00000532935 OR12D1P0DN82 309 aa13.88□□□□□ -0.19
CPSF1-210ENST00000532935 ZNF17P17021 662 aa13.88□□□□□ -0.19
CPSF1-210ENST00000532935 BMP5P22003 454 aa13.88□□□□□ -0.19
CPSF1-210ENST00000532935 KHKP50053 298 aa13.88□□□□□ -0.19
CPSF1-210ENST00000532935 IDH3AP50213 366 aa13.88□□□□□ -0.19
CPSF1-210ENST00000532935 RNF144AP50876 292 aaPredicted RBP13.88□□□□□ -0.19
CPSF1-210ENST00000532935 ZNF136P52737 540 aa13.88□□□□□ -0.19
CPSF1-210ENST00000532935 ATAD3BQ5T9A4 648 aa13.88□□□□□ -0.19
CPSF1-210ENST00000532935 HEPHL1Q6MZM0 1159 aa13.88□□□□□ -0.19
CPSF1-210ENST00000532935 MEX3BQ6ZN04 569 aaKnown RBP13.88□□□□□ -0.19
CPSF1-210ENST00000532935 UBQLNLQ8IYU4 475 aa13.88□□□□□ -0.19
CPSF1-210ENST00000532935 MIER2Q8N344 545 aa13.88□□□□□ -0.19
CPSF1-210ENST00000532935 RELL2Q8NC24 303 aaPredicted RBP13.88□□□□□ -0.19
CPSF1-210ENST00000532935 OR9I1Q8NGQ6 314 aa13.88□□□□□ -0.19
CPSF1-210ENST00000532935 XAGE5Q8WWM1 108 aa13.88□□□□□ -0.19
CPSF1-210ENST00000532935 MAGEB18Q96M61 343 aa13.88□□□□□ -0.19
CPSF1-210ENST00000532935 TREX2Q9BQ50 279 aaPredicted RBP13.88□□□□□ -0.19
CPSF1-210ENST00000532935 NMUR2Q9GZQ4 415 aa13.88□□□□□ -0.19
CPSF1-210ENST00000532935 ZNF350Q9GZX5 532 aa13.88□□□□□ -0.19
CPSF1-210ENST00000532935 TCF7L2Q9NQB0 619 aa13.88□□□□□ -0.19
CPSF1-210ENST00000532935 MED17Q9NVC6 651 aa13.88□□□□□ -0.19
CPSF1-210ENST00000532935 CLCF1Q9UBD9 225 aa13.88□□□□□ -0.19
CPSF1-210ENST00000532935 DTNAQ9Y4J8 743 aa13.88□□□□□ -0.19
CPSF1-210ENST00000532935 RFXANKO14593 260 aa13.87□□□□□ -0.19
CPSF1-210ENST00000532935 FCMRO60667 390 aa13.87□□□□□ -0.19
CPSF1-210ENST00000532935 GSNP06396 782 aa13.87□□□□□ -0.19
CPSF1-210ENST00000532935 IGFBP2P18065 325 aa13.87□□□□□ -0.19
CPSF1-210ENST00000532935 CTSSP25774 331 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms