RNA–Protein interactions for RNA: ENST00000532800.1

RPUSD4-207, Transcript of RNA pseudouridylate synthase domain containing 4, humanhuman

TSL 2

Gene RPUSD4, Length 1,030 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4-207ENST00000532800 LIPMQ5VYY2 423 aa15.28■□□□□ 0.04
RPUSD4-207ENST00000532800 MFSD12Q6NUT3 480 aa15.28■□□□□ 0.04
RPUSD4-207ENST00000532800 C10orf107Q8IVU9 208 aa15.28■□□□□ 0.04
RPUSD4-207ENST00000532800 OR2V1Q8NHB1 315 aa15.28■□□□□ 0.04
RPUSD4-207ENST00000532800 CEP70Q8NHQ1 597 aa15.28■□□□□ 0.04
RPUSD4-207ENST00000532800 POC1BQ8TC44 478 aa15.28■□□□□ 0.04
RPUSD4-207ENST00000532800 IGFBPL1Q8WX77 278 aa15.28■□□□□ 0.04
RPUSD4-207ENST00000532800 ZBED6CLQ96FA7 236 aaPredicted RBP15.28■□□□□ 0.04
RPUSD4-207ENST00000532800 NTMQ9P121 344 aa15.28■□□□□ 0.04
RPUSD4-207ENST00000532800 STOML1Q9UBI4 398 aa15.28■□□□□ 0.04
RPUSD4-207ENST00000532800 MCTS1Q9ULC4 181 aaKnown RBP15.28■□□□□ 0.04
RPUSD4-207ENST00000532800 USF3Q68DE3 2245 aa15.27■□□□□ 0.04
RPUSD4-207ENST00000532800 C7orf72A4D263 438 aa15.27■□□□□ 0.04
RPUSD4-207ENST00000532800 ADAMDEC1O15204 470 aa15.27■□□□□ 0.04
RPUSD4-207ENST00000532800 SYNGR4O95473 234 aa15.27■□□□□ 0.04
RPUSD4-207ENST00000532800 LINC00032P0C843 101 aa15.27■□□□□ 0.04
RPUSD4-207ENST00000532800 IL11P20809 199 aa15.27■□□□□ 0.04
RPUSD4-207ENST00000532800 PCSK6P29122 969 aa15.27■□□□□ 0.04
RPUSD4-207ENST00000532800 SHC1P29353 583 aa15.27■□□□□ 0.04
RPUSD4-207ENST00000532800 CCT5P48643 541 aa15.27■□□□□ 0.04
RPUSD4-207ENST00000532800 ZNF41P51814 821 aaPredicted RBP15.27■□□□□ 0.04
RPUSD4-207ENST00000532800 RAC1P63000 192 aa15.27■□□□□ 0.04
RPUSD4-207ENST00000532800 PCLAFQ15004 111 aa15.27■□□□□ 0.04
RPUSD4-207ENST00000532800 ZNF704Q6ZNC4 412 aaPredicted RBP15.27■□□□□ 0.04
RPUSD4-207ENST00000532800 C4orf33Q8N1A6 199 aa15.27■□□□□ 0.04
RPUSD4-207ENST00000532800 CEP112Q8N8E3 955 aa15.27■□□□□ 0.04
RPUSD4-207ENST00000532800 LRRN4CLQ8ND94 238 aa15.27■□□□□ 0.04
RPUSD4-207ENST00000532800 NUDT8Q8WV74 236 aa15.27■□□□□ 0.04
RPUSD4-207ENST00000532800 ZBTB8AQ96BR9 441 aa15.27■□□□□ 0.04
RPUSD4-207ENST00000532800 BDH2Q9BUT1 245 aa15.27■□□□□ 0.04
RPUSD4-207ENST00000532800 GATA5Q9BWX5 397 aaPredicted RBP15.27■□□□□ 0.04
RPUSD4-207ENST00000532800 GSX2Q9BZM3 304 aa15.27■□□□□ 0.04
RPUSD4-207ENST00000532800 C12orf49Q9H741 205 aa15.27■□□□□ 0.04
RPUSD4-207ENST00000532800 SIRT3Q9NTG7 399 aaPredicted RBP15.27■□□□□ 0.04
RPUSD4-207ENST00000532800 JMJD1CQ15652 2540 aa15.27■□□□□ 0.03
RPUSD4-207ENST00000532800 CSPG4Q6UVK1 2322 aa15.27■□□□□ 0.03
RPUSD4-207ENST00000532800 TMEM233B4DJY2 109 aa15.26■□□□□ 0.03
RPUSD4-207ENST00000532800 COPEO14579 308 aa15.26■□□□□ 0.03
RPUSD4-207ENST00000532800 LSM1O15116 133 aaKnown RBP15.26■□□□□ 0.03
RPUSD4-207ENST00000532800 ALOX5P09917 674 aa15.26■□□□□ 0.03
RPUSD4-207ENST00000532800 NEFHP12036 1026 aa15.26■□□□□ 0.03
RPUSD4-207ENST00000532800 AGTR1P30556 359 aa15.26■□□□□ 0.03
RPUSD4-207ENST00000532800 PRIM2P49643 509 aa15.26■□□□□ 0.03
RPUSD4-207ENST00000532800 RNF144AP50876 292 aaPredicted RBP15.26■□□□□ 0.03
RPUSD4-207ENST00000532800 GALNTL6Q49A17 601 aa15.26■□□□□ 0.03
RPUSD4-207ENST00000532800 EXOSC6Q5RKV6 272 aaKnown RBP15.26■□□□□ 0.03
RPUSD4-207ENST00000532800 CPTPQ5TA50 214 aa15.26■□□□□ 0.03
RPUSD4-207ENST00000532800 KANK2Q63ZY3 851 aa15.26■□□□□ 0.03
RPUSD4-207ENST00000532800 HBMQ6B0K9 141 aa15.26■□□□□ 0.03
RPUSD4-207ENST00000532800 ESPNLQ6ZVH7 1005 aa15.26■□□□□ 0.03
RPUSD4-207ENST00000532800 PLEKHM3Q6ZWE6 761 aa15.26■□□□□ 0.03
RPUSD4-207ENST00000532800 PRIMA1Q86XR5 153 aa15.26■□□□□ 0.03
RPUSD4-207ENST00000532800 WFDC8Q8IUA0 241 aa15.26■□□□□ 0.03
RPUSD4-207ENST00000532800 HOMEZQ8IX15 550 aa15.26■□□□□ 0.03
RPUSD4-207ENST00000532800 COX18Q8N8Q8 333 aa15.26■□□□□ 0.03
RPUSD4-207ENST00000532800 OR6Y1Q8NGX8 325 aa15.26■□□□□ 0.03
RPUSD4-207ENST00000532800 ACTRT2Q8TDY3 377 aa15.26■□□□□ 0.03
RPUSD4-207ENST00000532800 EPS8L3Q8TE67 593 aaKnown RBP15.26■□□□□ 0.03
RPUSD4-207ENST00000532800 JADE3Q92613 823 aa15.26■□□□□ 0.03
RPUSD4-207ENST00000532800 FAM120BQ96EK7 910 aaKnown RBP15.26■□□□□ 0.03
RPUSD4-207ENST00000532800 PLPPR2Q96GM1 343 aa15.26■□□□□ 0.03
RPUSD4-207ENST00000532800 ACTR6Q9GZN1 396 aa15.26■□□□□ 0.03
RPUSD4-207ENST00000532800 UBQLN4Q9NRR5 601 aa15.26■□□□□ 0.03
RPUSD4-207ENST00000532800 ACSS1Q9NUB1 689 aaPredicted RBP15.26■□□□□ 0.03
RPUSD4-207ENST00000532800 PAQR5Q9NXK6 330 aaPredicted RBP15.26■□□□□ 0.03
RPUSD4-207ENST00000532800 GIMAP2Q9UG22 337 aa15.26■□□□□ 0.03
RPUSD4-207ENST00000532800 DNAJC15Q9Y5T4 150 aa15.26■□□□□ 0.03
RPUSD4-207ENST00000532800 NPIPA5A0A0B4J1W7 369 aa15.25■□□□□ 0.03
RPUSD4-207ENST00000532800 NPIPA7E9PJI5 369 aa15.25■□□□□ 0.03
RPUSD4-207ENST00000532800 SCDO00767 359 aa15.25■□□□□ 0.03
RPUSD4-207ENST00000532800 OIP5O43482 229 aa15.25■□□□□ 0.03
RPUSD4-207ENST00000532800 NPIPA8P0DM63 369 aa15.25■□□□□ 0.03
RPUSD4-207ENST00000532800 HPGDP15428 266 aa15.25■□□□□ 0.03
RPUSD4-207ENST00000532800 PPP3CBP16298 524 aa15.25■□□□□ 0.03
RPUSD4-207ENST00000532800 KRT4P19013 534 aa15.25■□□□□ 0.03
RPUSD4-207ENST00000532800 SFTPDP35247 375 aa15.25■□□□□ 0.03
RPUSD4-207ENST00000532800 ZNF844Q08AG5 666 aa15.25■□□□□ 0.03
RPUSD4-207ENST00000532800 FOXF1Q12946 379 aa15.25■□□□□ 0.03
RPUSD4-207ENST00000532800 RNF165Q6ZSG1 346 aa15.25■□□□□ 0.03
RPUSD4-207ENST00000532800 CNPY4Q8N129 248 aa15.25■□□□□ 0.03
RPUSD4-207ENST00000532800 B4GALNT2Q8NHY0 566 aa15.25■□□□□ 0.03
RPUSD4-207ENST00000532800 KIF18AQ8NI77 898 aa15.25■□□□□ 0.03
RPUSD4-207ENST00000532800 UBLCP1Q8WVY7 318 aaPredicted RBP15.25■□□□□ 0.03
RPUSD4-207ENST00000532800 ROBO4Q8WZ75 1007 aa15.25■□□□□ 0.03
RPUSD4-207ENST00000532800 CDS1Q92903 461 aa15.25■□□□□ 0.03
RPUSD4-207ENST00000532800 KLHL15Q96M94 604 aa15.25■□□□□ 0.03
RPUSD4-207ENST00000532800 IQCGQ9H095 443 aaKnown RBP15.25■□□□□ 0.03
RPUSD4-207ENST00000532800 ZCCHC3Q9NUD5 404 aaKnown RBP15.25■□□□□ 0.03
RPUSD4-207ENST00000532800 GIN1Q9NXP7 522 aa15.25■□□□□ 0.03
RPUSD4-207ENST00000532800 FREM1Q5H8C1 2179 aa15.24■□□□□ 0.03
RPUSD4-207ENST00000532800 A0A1W2PQD3 144 aa15.24■□□□□ 0.03
RPUSD4-207ENST00000532800 CNOT4O95628 575 aaKnown RBP15.24■□□□□ 0.03
RPUSD4-207ENST00000532800 NTN1O95631 604 aa15.24■□□□□ 0.03
RPUSD4-207ENST00000532800 CHRNGP07510 517 aa15.24■□□□□ 0.03
RPUSD4-207ENST00000532800 LINGO3P0C6S8 592 aa15.24■□□□□ 0.03
RPUSD4-207ENST00000532800 BCKDHAP12694 445 aa15.24■□□□□ 0.03
RPUSD4-207ENST00000532800 NID1P14543 1247 aa15.24■□□□□ 0.03
RPUSD4-207ENST00000532800 ME2P23368 584 aa15.24■□□□□ 0.03
RPUSD4-207ENST00000532800 POU6F2P78424 691 aaPredicted RBP15.24■□□□□ 0.03
RPUSD4-207ENST00000532800 ZNF117Q03924 483 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms