RNA–Protein interactions for RNA: ENST00000531967.5

ECHDC1-222, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene ECHDC1, Length 2,585 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-222ENST00000531967 PITPNAQ00169 270 aa4.77□□□□□ -1.65
ECHDC1-222ENST00000531967 SERTAD2Q14140 314 aa4.77□□□□□ -1.65
ECHDC1-222ENST00000531967 ODF4Q2M2E3 257 aa4.77□□□□□ -1.65
ECHDC1-222ENST00000531967 C5orf64Q2M2E5 130 aa4.77□□□□□ -1.65
ECHDC1-222ENST00000531967 EIF2S3LQ2VIR3 472 aaKnown RBP4.77□□□□□ -1.65
ECHDC1-222ENST00000531967 ZNF385BQ569K4 471 aa4.77□□□□□ -1.65
ECHDC1-222ENST00000531967 AARS2Q5JTZ9 985 aaKnown RBP4.77□□□□□ -1.65
ECHDC1-222ENST00000531967 C11orf63Q6NUN7 778 aa4.77□□□□□ -1.65
ECHDC1-222ENST00000531967 CDC42EP5Q6NZY7 148 aa4.77□□□□□ -1.65
ECHDC1-222ENST00000531967 CSNK1A1LQ8N752 337 aa4.77□□□□□ -1.65
ECHDC1-222ENST00000531967 NFAM1Q8NET5 270 aaPredicted RBP4.77□□□□□ -1.65
ECHDC1-222ENST00000531967 STXBP6Q8NFX7 210 aa4.77□□□□□ -1.65
ECHDC1-222ENST00000531967 OR1F12Q8NHA8 337 aa4.77□□□□□ -1.65
ECHDC1-222ENST00000531967 PIGTQ969N2 578 aa4.77□□□□□ -1.65
ECHDC1-222ENST00000531967 ERGIC1Q969X5 290 aa4.77□□□□□ -1.65
ECHDC1-222ENST00000531967 SCRN2Q96FV2 425 aa4.77□□□□□ -1.65
ECHDC1-222ENST00000531967 SMIM10Q96HG1 83 aa4.77□□□□□ -1.65
ECHDC1-222ENST00000531967 CYSLTR2Q9NS75 346 aa4.77□□□□□ -1.65
ECHDC1-222ENST00000531967 MRTO4Q9UKD2 239 aaKnown RBP4.77□□□□□ -1.65
ECHDC1-222ENST00000531967 HEY1Q9Y5J3 304 aa4.77□□□□□ -1.65
ECHDC1-222ENST00000531967 MAP3K4Q9Y6R4 1608 aa4.77□□□□□ -1.65
ECHDC1-222ENST00000531967 PNPLA6Q8IY17 1366 aa4.77□□□□□ -1.65
ECHDC1-222ENST00000531967 IFT172Q9UG01 1749 aa4.77□□□□□ -1.65
ECHDC1-222ENST00000531967 CHD2O14647 1828 aaKnown RBP4.76□□□□□ -1.65
ECHDC1-222ENST00000531967 SYCE1LA8MT33 242 aa4.76□□□□□ -1.65
ECHDC1-222ENST00000531967 BCAR3O75815 825 aa4.76□□□□□ -1.65
ECHDC1-222ENST00000531967 CRYZL1O95825 349 aa4.76□□□□□ -1.65
ECHDC1-222ENST00000531967 ST6GAL1P15907 406 aa4.76□□□□□ -1.65
ECHDC1-222ENST00000531967 PMCHP20382 165 aa4.76□□□□□ -1.65
ECHDC1-222ENST00000531967 CMA1P23946 247 aa4.76□□□□□ -1.65
ECHDC1-222ENST00000531967 IFNA8P32881 189 aa4.76□□□□□ -1.65
ECHDC1-222ENST00000531967 PKP1Q13835 747 aa4.76□□□□□ -1.65
ECHDC1-222ENST00000531967 ADGRE1Q14246 886 aa4.76□□□□□ -1.65
ECHDC1-222ENST00000531967 SLC17A1Q14916 467 aa4.76□□□□□ -1.65
ECHDC1-222ENST00000531967 XP32Q5T750 250 aa4.76□□□□□ -1.65
ECHDC1-222ENST00000531967 OR5M10Q6IEU7 315 aa4.76□□□□□ -1.65
ECHDC1-222ENST00000531967 ADNP2Q6IQ32 1131 aa4.76□□□□□ -1.65
ECHDC1-222ENST00000531967 RFPL4BQ6ZWI9 263 aa4.76□□□□□ -1.65
ECHDC1-222ENST00000531967 BEST3Q8N1M1 668 aa4.76□□□□□ -1.65
ECHDC1-222ENST00000531967 KLHL36Q8N4N3 616 aa4.76□□□□□ -1.65
ECHDC1-222ENST00000531967 SLC5A8Q8N695 610 aa4.76□□□□□ -1.65
ECHDC1-222ENST00000531967 GCSAMQ8N6F7 178 aa4.76□□□□□ -1.65
ECHDC1-222ENST00000531967 ZNF548Q8NEK5 533 aaPredicted RBP4.76□□□□□ -1.65
ECHDC1-222ENST00000531967 TMEM239Q8WW34 195 aa4.76□□□□□ -1.65
ECHDC1-222ENST00000531967 SMARCD2Q92925 531 aa4.76□□□□□ -1.65
ECHDC1-222ENST00000531967 MTERF3Q96E29 417 aa4.76□□□□□ -1.65
ECHDC1-222ENST00000531967 CSPG4P5Q96PW8 444 aa4.76□□□□□ -1.65
ECHDC1-222ENST00000531967 CCDC3Q9BQI4 270 aa4.76□□□□□ -1.65
ECHDC1-222ENST00000531967 BTBD10Q9BSF8 475 aa4.76□□□□□ -1.65
ECHDC1-222ENST00000531967 C5orf66Q9H5L9 145 aa4.76□□□□□ -1.65
ECHDC1-222ENST00000531967 C7orf69Q9H7B7 122 aa4.76□□□□□ -1.65
ECHDC1-222ENST00000531967 SPAG4Q9NPE6 437 aa4.76□□□□□ -1.65
ECHDC1-222ENST00000531967 PRSS16Q9NQE7 514 aa4.76□□□□□ -1.65
ECHDC1-222ENST00000531967 ABCB10Q9NRK6 738 aa4.76□□□□□ -1.65
ECHDC1-222ENST00000531967 C1orf123Q9NWV4 160 aa4.76□□□□□ -1.65
ECHDC1-222ENST00000531967 DIMT1Q9UNQ2 313 aaKnown RBP4.76□□□□□ -1.65
ECHDC1-222ENST00000531967 TIMM10BQ9Y5J6 103 aa4.76□□□□□ -1.65
ECHDC1-222ENST00000531967 ABCA9Q8IUA7 1624 aa4.76□□□□□ -1.65
ECHDC1-222ENST00000531967 ATP7AQ04656 1500 aa4.76□□□□□ -1.65
ECHDC1-222ENST00000531967 CNTNAP2Q9UHC6 1331 aa4.76□□□□□ -1.65
ECHDC1-222ENST00000531967 MARCH11A6NNE9 402 aa4.76□□□□□ -1.65
ECHDC1-222ENST00000531967 E5RGE8 158 aa4.76□□□□□ -1.65
ECHDC1-222ENST00000531967 H0YL77 283 aa4.76□□□□□ -1.65
ECHDC1-222ENST00000531967 H3BN98 237 aa4.76□□□□□ -1.65
ECHDC1-222ENST00000531967 H3BTX0 84 aa4.76□□□□□ -1.65
ECHDC1-222ENST00000531967 DCNP07585 359 aaKnown RBP4.76□□□□□ -1.65
ECHDC1-222ENST00000531967 RAB4AP20338 218 aa4.76□□□□□ -1.65
ECHDC1-222ENST00000531967 RBMS1P29558 406 aaKnown RBP4.76□□□□□ -1.65
ECHDC1-222ENST00000531967 PCK1P35558 622 aa4.76□□□□□ -1.65
ECHDC1-222ENST00000531967 ACVR1BP36896 505 aa4.76□□□□□ -1.65
ECHDC1-222ENST00000531967 SLC26A3P40879 764 aa4.76□□□□□ -1.65
ECHDC1-222ENST00000531967 MAGEA2P43356 314 aa4.76□□□□□ -1.65
ECHDC1-222ENST00000531967 CXCR4P61073 352 aa4.76□□□□□ -1.65
ECHDC1-222ENST00000531967 JAG1P78504 1218 aa4.76□□□□□ -1.65
ECHDC1-222ENST00000531967 CDR2Q01850 454 aa4.76□□□□□ -1.65
ECHDC1-222ENST00000531967 GABPAQ06546 454 aa4.76□□□□□ -1.65
ECHDC1-222ENST00000531967 CHI3L2Q15782 390 aa4.76□□□□□ -1.65
ECHDC1-222ENST00000531967 SERPINA11Q86U17 422 aa4.76□□□□□ -1.65
ECHDC1-222ENST00000531967 TRIM69Q86WT6 500 aa4.76□□□□□ -1.65
ECHDC1-222ENST00000531967 ZFAND4Q86XD8 727 aa4.76□□□□□ -1.65
ECHDC1-222ENST00000531967 ZNF100Q8IYN0 542 aa4.76□□□□□ -1.65
ECHDC1-222ENST00000531967 SYS1Q8N2H4 156 aa4.76□□□□□ -1.65
ECHDC1-222ENST00000531967 NATD1Q8N6N6 113 aa4.76□□□□□ -1.65
ECHDC1-222ENST00000531967 KYQ8NBH2 561 aa4.76□□□□□ -1.65
ECHDC1-222ENST00000531967 TCP10LQ8TDR4 215 aa4.76□□□□□ -1.65
ECHDC1-222ENST00000531967 NECAP2Q9NVZ3 263 aa4.76□□□□□ -1.65
ECHDC1-222ENST00000531967 ASB6Q9NWX5 421 aa4.76□□□□□ -1.65
ECHDC1-222ENST00000531967 CD274Q9NZQ7 290 aa4.76□□□□□ -1.65
ECHDC1-222ENST00000531967 B3GAT1Q9P2W7 334 aa4.76□□□□□ -1.65
ECHDC1-222ENST00000531967 MAN1B1Q9UKM7 699 aa4.76□□□□□ -1.65
ECHDC1-222ENST00000531967 NSG2Q9Y328 171 aa4.76□□□□□ -1.65
ECHDC1-222ENST00000531967 TBL2Q9Y4P3 447 aaKnown RBP4.76□□□□□ -1.65
ECHDC1-222ENST00000531967 V9GYQ6 96 aa4.76□□□□□ -1.65
ECHDC1-222ENST00000531967 SETBP1Q9Y6X0 1596 aa4.75□□□□□ -1.65
ECHDC1-222ENST00000531967 TRAPPC8Q9Y2L5 1435 aa4.75□□□□□ -1.65
ECHDC1-222ENST00000531967 HYKKA2RU49 373 aa4.75□□□□□ -1.65
ECHDC1-222ENST00000531967 TSPAN2O60636 221 aa4.75□□□□□ -1.65
ECHDC1-222ENST00000531967 CLDN9O95484 217 aa4.75□□□□□ -1.65
ECHDC1-222ENST00000531967 HLA-DMAP28067 261 aa4.75□□□□□ -1.65
ECHDC1-222ENST00000531967 CD1CP29017 333 aa4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms