RNA–Protein interactions for RNA: ENST00000531405.5

SSSCA1-206, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 2 BASIC

Gene SSSCA1, Length 879 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-206ENST00000531405 AKAP1Q92667 903 aaKnown RBP eCLIP16.45■□□□□ 0.22
SSSCA1-206ENST00000531405 ZBTB8AQ96BR9 441 aa16.45■□□□□ 0.22
SSSCA1-206ENST00000531405 CCDC126Q96EE4 140 aa16.45■□□□□ 0.22
SSSCA1-206ENST00000531405 TMEM204Q9BSN7 226 aa16.45■□□□□ 0.22
SSSCA1-206ENST00000531405 PAQR5Q9NXK6 330 aaPredicted RBP16.45■□□□□ 0.22
SSSCA1-206ENST00000531405 DCDC2Q9UHG0 476 aa16.45■□□□□ 0.22
SSSCA1-206ENST00000531405 NTN1O95631 604 aa16.44■□□□□ 0.22
SSSCA1-206ENST00000531405 PROCP04070 461 aa16.44■□□□□ 0.22
SSSCA1-206ENST00000531405 NGFRP08138 427 aa16.44■□□□□ 0.22
SSSCA1-206ENST00000531405 EFNA1P20827 205 aaPredicted RBP16.44■□□□□ 0.22
SSSCA1-206ENST00000531405 SHC1P29353 583 aa16.44■□□□□ 0.22
SSSCA1-206ENST00000531405 TNK1Q13470 666 aa16.44■□□□□ 0.22
SSSCA1-206ENST00000531405 TSC22D1Q15714 1073 aa16.44■□□□□ 0.22
SSSCA1-206ENST00000531405 DUSP5Q16690 384 aa16.44■□□□□ 0.22
SSSCA1-206ENST00000531405 VPS26BQ4G0F5 336 aa16.44■□□□□ 0.22
SSSCA1-206ENST00000531405 CFAP157Q5JU67 520 aa16.44■□□□□ 0.22
SSSCA1-206ENST00000531405 CCNJQ5T5M9 372 aa16.44■□□□□ 0.22
SSSCA1-206ENST00000531405 CPTPQ5TA50 214 aa16.44■□□□□ 0.22
SSSCA1-206ENST00000531405 ESPNLQ6ZVH7 1005 aa16.44■□□□□ 0.22
SSSCA1-206ENST00000531405 ZNF611Q8N823 705 aa16.44■□□□□ 0.22
SSSCA1-206ENST00000531405 MAPK1IP1LQ8NDC0 245 aa16.44■□□□□ 0.22
SSSCA1-206ENST00000531405 MNS1Q8NEH6 495 aa16.44■□□□□ 0.22
SSSCA1-206ENST00000531405 CLHC1Q8NHS4 586 aa16.44■□□□□ 0.22
SSSCA1-206ENST00000531405 FAM110BQ8TC76 370 aa16.44■□□□□ 0.22
SSSCA1-206ENST00000531405 ROBO4Q8WZ75 1007 aa16.44■□□□□ 0.22
SSSCA1-206ENST00000531405 C16orf58Q96GQ5 468 aa16.44■□□□□ 0.22
SSSCA1-206ENST00000531405 TSSK3Q96PN8 268 aa16.44■□□□□ 0.22
SSSCA1-206ENST00000531405 C12orf65Q9H3J6 166 aaKnown RBP16.44■□□□□ 0.22
SSSCA1-206ENST00000531405 LAMP3Q9UQV4 416 aa16.44■□□□□ 0.22
SSSCA1-206ENST00000531405 STAB1Q9NY15 2570 aa16.43■□□□□ 0.22
SSSCA1-206ENST00000531405 C7orf72A4D263 438 aa16.43■□□□□ 0.22
SSSCA1-206ENST00000531405 GLRA3O75311 464 aa16.43■□□□□ 0.22
SSSCA1-206ENST00000531405 TUBBP07437 444 aa16.43■□□□□ 0.22
SSSCA1-206ENST00000531405 FAM153BP0C7A2 387 aa16.43■□□□□ 0.22
SSSCA1-206ENST00000531405 UROSP10746 265 aa16.43■□□□□ 0.22
SSSCA1-206ENST00000531405 SDC1P18827 310 aa16.43■□□□□ 0.22
SSSCA1-206ENST00000531405 ME2P23368 584 aa16.43■□□□□ 0.22
SSSCA1-206ENST00000531405 SFTPDP35247 375 aa16.43■□□□□ 0.22
SSSCA1-206ENST00000531405 PRIM2P49643 509 aa16.43■□□□□ 0.22
SSSCA1-206ENST00000531405 RNF144AP50876 292 aaPredicted RBP16.43■□□□□ 0.22
SSSCA1-206ENST00000531405 MANFP55145 182 aaKnown RBP16.43■□□□□ 0.22
SSSCA1-206ENST00000531405 KRTAP1-1Q07627 177 aa16.43■□□□□ 0.22
SSSCA1-206ENST00000531405 CD226Q15762 336 aa16.43■□□□□ 0.22
SSSCA1-206ENST00000531405 FAM153CQ494X1 144 aa16.43■□□□□ 0.22
SSSCA1-206ENST00000531405 STK32CQ86UX6 486 aa16.43■□□□□ 0.22
SSSCA1-206ENST00000531405 OR2T11Q8NH01 316 aa16.43■□□□□ 0.22
SSSCA1-206ENST00000531405 CEP70Q8NHQ1 597 aa16.43■□□□□ 0.22
SSSCA1-206ENST00000531405 ZFP28Q8NHY6 868 aa16.43■□□□□ 0.22
SSSCA1-206ENST00000531405 ACTRT2Q8TDY3 377 aa16.43■□□□□ 0.22
SSSCA1-206ENST00000531405 ABHD3Q8WU67 409 aa16.43■□□□□ 0.22
SSSCA1-206ENST00000531405 OSTF1Q92882 214 aa16.43■□□□□ 0.22
SSSCA1-206ENST00000531405 S100PBPQ96BU1 408 aa16.43■□□□□ 0.22
SSSCA1-206ENST00000531405 PPCDCQ96CD2 204 aa16.43■□□□□ 0.22
SSSCA1-206ENST00000531405 MS4A4EQ96PG1 132 aa16.43■□□□□ 0.22
SSSCA1-206ENST00000531405 REEP4Q9H6H4 257 aa16.43■□□□□ 0.22
SSSCA1-206ENST00000531405 LRTM1Q9HBL6 345 aa16.43■□□□□ 0.22
SSSCA1-206ENST00000531405 FANCFQ9NPI8 374 aa16.43■□□□□ 0.22
SSSCA1-206ENST00000531405 GLRX2Q9NS18 164 aa16.43■□□□□ 0.22
SSSCA1-206ENST00000531405 C1orf109Q9NX04 203 aa16.43■□□□□ 0.22
SSSCA1-206ENST00000531405 SH3BP4Q9P0V3 963 aa16.43■□□□□ 0.22
SSSCA1-206ENST00000531405 BAIAP2L1Q9UHR4 511 aa16.43■□□□□ 0.22
SSSCA1-206ENST00000531405 GPR52Q9Y2T5 361 aa16.43■□□□□ 0.22
SSSCA1-206ENST00000531405 FIS1Q9Y3D6 152 aa16.43■□□□□ 0.22
SSSCA1-206ENST00000531405 NPIPB8E9PQR5 432 aa16.42■□□□□ 0.22
SSSCA1-206ENST00000531405 HPGDP15428 266 aa16.42■□□□□ 0.22
SSSCA1-206ENST00000531405 PSMB1P20618 241 aaKnown RBP16.42■□□□□ 0.22
SSSCA1-206ENST00000531405 PRPH2P23942 346 aa16.42■□□□□ 0.22
SSSCA1-206ENST00000531405 NUFIP2Q7Z417 695 aaKnown RBP16.42■□□□□ 0.22
SSSCA1-206ENST00000531405 LILRA2Q8N149 483 aa16.42■□□□□ 0.22
SSSCA1-206ENST00000531405 ZNF619Q8N2I2 560 aa16.42■□□□□ 0.22
SSSCA1-206ENST00000531405 COX18Q8N8Q8 333 aa16.42■□□□□ 0.22
SSSCA1-206ENST00000531405 LILRB1Q8NHL6 650 aaPredicted RBP16.42■□□□□ 0.22
SSSCA1-206ENST00000531405 B4GALNT2Q8NHY0 566 aa16.42■□□□□ 0.22
SSSCA1-206ENST00000531405 JADE3Q92613 823 aa16.42■□□□□ 0.22
SSSCA1-206ENST00000531405 ZBED6CLQ96FA7 236 aaPredicted RBP16.42■□□□□ 0.22
SSSCA1-206ENST00000531405 KLHL15Q96M94 604 aa16.42■□□□□ 0.22
SSSCA1-206ENST00000531405 SRXN1Q9BYN0 137 aa16.42■□□□□ 0.22
SSSCA1-206ENST00000531405 UBQLN4Q9NRR5 601 aa16.42■□□□□ 0.22
SSSCA1-206ENST00000531405 NTMQ9P121 344 aa16.42■□□□□ 0.22
SSSCA1-206ENST00000531405 PLCE1Q9P212 2302 aa16.41■□□□□ 0.22
SSSCA1-206ENST00000531405 H3BQF6 201 aa16.41■□□□□ 0.22
SSSCA1-206ENST00000531405 SLC28A1O00337 649 aa16.41■□□□□ 0.22
SSSCA1-206ENST00000531405 SCDO00767 359 aa16.41■□□□□ 0.22
SSSCA1-206ENST00000531405 OIP5O43482 229 aa16.41■□□□□ 0.22
SSSCA1-206ENST00000531405 PLIN3O60664 434 aa16.41■□□□□ 0.22
SSSCA1-206ENST00000531405 GCM2O75603 506 aaPredicted RBP16.41■□□□□ 0.22
SSSCA1-206ENST00000531405 ALOX5P09917 674 aa16.41■□□□□ 0.22
SSSCA1-206ENST00000531405 LINGO3P0C6S8 592 aa16.41■□□□□ 0.22
SSSCA1-206ENST00000531405 FRKP42685 505 aaPredicted RBP16.41■□□□□ 0.22
SSSCA1-206ENST00000531405 CARD18P57730 90 aa16.41■□□□□ 0.22
SSSCA1-206ENST00000531405 DNAJB13P59910 316 aa16.41■□□□□ 0.22
SSSCA1-206ENST00000531405 RPS4XP62701 263 aaKnown RBP16.41■□□□□ 0.22
SSSCA1-206ENST00000531405 RPL38P63173 70 aaKnown RBP16.41■□□□□ 0.22
SSSCA1-206ENST00000531405 FOXF1Q12946 379 aa16.41■□□□□ 0.22
SSSCA1-206ENST00000531405 ZNF239Q16600 458 aaKnown RBP16.41■□□□□ 0.22
SSSCA1-206ENST00000531405 Q6ZSR9 355 aa16.41■□□□□ 0.22
SSSCA1-206ENST00000531405 ATG4DQ86TL0 474 aaPredicted RBP16.41■□□□□ 0.22
SSSCA1-206ENST00000531405 TRABD2AQ86V40 505 aa16.41■□□□□ 0.22
SSSCA1-206ENST00000531405 OR6Y1Q8NGX8 325 aa16.41■□□□□ 0.22
SSSCA1-206ENST00000531405 RNF128Q8TEB7 428 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms