RNA–Protein interactions for RNA: ENST00000531297.1

SOX6-214, Transcript of SRY-box 6, humanhuman

TSL 3

Gene SOX6, Length 429 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-214ENST00000531297 AIG1Q9NVV5 245 aa3.8□□□□□ -1.8
SOX6-214ENST00000531297 GID8Q9NWU2 228 aa3.8□□□□□ -1.8
SOX6-214ENST00000531297 ZIM2Q9NZV7 527 aa3.8□□□□□ -1.8
SOX6-214ENST00000531297 STX18Q9P2W9 335 aaKnown RBP3.8□□□□□ -1.8
SOX6-214ENST00000531297 ABCD2Q9UBJ2 740 aa3.8□□□□□ -1.8
SOX6-214ENST00000531297 GIMAP2Q9UG22 337 aa3.8□□□□□ -1.8
SOX6-214ENST00000531297 CD300AQ9UGN4 299 aa3.8□□□□□ -1.8
SOX6-214ENST00000531297 PRPF19Q9UMS4 504 aaKnown RBP3.8□□□□□ -1.8
SOX6-214ENST00000531297 POMPQ9Y244 141 aa3.8□□□□□ -1.8
SOX6-214ENST00000531297 AP3M1Q9Y2T2 418 aa3.8□□□□□ -1.8
SOX6-214ENST00000531297 C15orf41Q9Y2V0 281 aa3.8□□□□□ -1.8
SOX6-214ENST00000531297 LRRC42Q9Y546 428 aa3.8□□□□□ -1.8
SOX6-214ENST00000531297 SLC22A7Q9Y694 548 aa3.8□□□□□ -1.8
SOX6-214ENST00000531297 ZNF780BQ9Y6R6 833 aa3.8□□□□□ -1.8
SOX6-214ENST00000531297 UNC13CQ8NB66 2214 aa3.8□□□□□ -1.8
SOX6-214ENST00000531297 RIF1Q5UIP0 2472 aaKnown RBP3.79□□□□□ -1.8
SOX6-214ENST00000531297 EP300Q09472 2414 aaPredicted RBP3.79□□□□□ -1.8
SOX6-214ENST00000531297 GPR179Q6PRD1 2367 aa3.79□□□□□ -1.8
SOX6-214ENST00000531297 IGHV5-51A0A0C4DH38 117 aa3.79□□□□□ -1.8
SOX6-214ENST00000531297 IGHV5-10-1A0A0J9YXX1 117 aa3.79□□□□□ -1.8
SOX6-214ENST00000531297 PRSS51A0A1B0GVH4 220 aa3.79□□□□□ -1.8
SOX6-214ENST00000531297 ATP6AP2A0A1C7CYW4 349 aa3.79□□□□□ -1.8
SOX6-214ENST00000531297 C1orf226A1L170 272 aa3.79□□□□□ -1.8
SOX6-214ENST00000531297 HYKKA2RU49 373 aa3.79□□□□□ -1.8
SOX6-214ENST00000531297 KRT87PA6NCN2 255 aa3.79□□□□□ -1.8
SOX6-214ENST00000531297 EFCAB7A8K855 629 aa3.79□□□□□ -1.8
SOX6-214ENST00000531297 BBIP1A8MTZ0 92 aa3.79□□□□□ -1.8
SOX6-214ENST00000531297 B4E171 279 aa3.79□□□□□ -1.8
SOX6-214ENST00000531297 C9J4A7 227 aa3.79□□□□□ -1.8
SOX6-214ENST00000531297 H0YIG0 161 aa3.79□□□□□ -1.8
SOX6-214ENST00000531297 RHODO00212 210 aa3.79□□□□□ -1.8
SOX6-214ENST00000531297 PCDH17O14917 1159 aa3.79□□□□□ -1.8
SOX6-214ENST00000531297 LSM1O15116 133 aaKnown RBP3.79□□□□□ -1.8
SOX6-214ENST00000531297 ANGPT2O15123 496 aa3.79□□□□□ -1.8
SOX6-214ENST00000531297 LCMT2O60294 686 aaKnown RBP3.79□□□□□ -1.8
SOX6-214ENST00000531297 CBFA2T3O75081 653 aa3.79□□□□□ -1.8
SOX6-214ENST00000531297 GMNNO75496 209 aa3.79□□□□□ -1.8
SOX6-214ENST00000531297 SLC22A3O75751 556 aa3.79□□□□□ -1.8
SOX6-214ENST00000531297 ATP6AP2O75787 350 aa3.79□□□□□ -1.8
SOX6-214ENST00000531297 PDE5AO76074 875 aa3.79□□□□□ -1.8
SOX6-214ENST00000531297 SOX30O94993 753 aa3.79□□□□□ -1.8
SOX6-214ENST00000531297 NSA2O95478 260 aaKnown RBP3.79□□□□□ -1.8
SOX6-214ENST00000531297 NPPAP01160 153 aa3.79□□□□□ -1.8
SOX6-214ENST00000531297 MBPP02686 304 aaPredicted RBP3.79□□□□□ -1.8
SOX6-214ENST00000531297 IL6P05231 212 aa3.79□□□□□ -1.8
SOX6-214ENST00000531297 KLK1P06870 262 aa3.79□□□□□ -1.8
SOX6-214ENST00000531297 CYC1P08574 325 aa3.79□□□□□ -1.8
SOX6-214ENST00000531297 RNH1P13489 461 aaKnown RBP3.79□□□□□ -1.8
SOX6-214ENST00000531297 ANPEPP15144 967 aa3.79□□□□□ -1.8
SOX6-214ENST00000531297 PVRP15151 417 aa3.79□□□□□ -1.8
SOX6-214ENST00000531297 HIST1H1TP22492 207 aaPredicted RBP3.79□□□□□ -1.8
SOX6-214ENST00000531297 JAK1P23458 1154 aa3.79□□□□□ -1.8
SOX6-214ENST00000531297 CD82P27701 267 aa3.79□□□□□ -1.8
SOX6-214ENST00000531297 IL12AP29459 219 aa3.79□□□□□ -1.8
SOX6-214ENST00000531297 RBMS1P29558 406 aaKnown RBP3.79□□□□□ -1.8
SOX6-214ENST00000531297 PEBP1P30086 187 aaKnown RBP3.79□□□□□ -1.8
SOX6-214ENST00000531297 NTSP30990 170 aa3.79□□□□□ -1.8
SOX6-214ENST00000531297 HOXD3P31249 432 aaPredicted RBP3.79□□□□□ -1.8
SOX6-214ENST00000531297 TIA1P31483 386 aaKnown RBP eCLIP3.79□□□□□ -1.8
SOX6-214ENST00000531297 S100A3P33764 101 aa3.79□□□□□ -1.8
SOX6-214ENST00000531297 MPIP34949 423 aa3.79□□□□□ -1.8
SOX6-214ENST00000531297 TSPAN7P41732 249 aa3.79□□□□□ -1.8
SOX6-214ENST00000531297 NUDT2P50583 147 aa3.79□□□□□ -1.8
SOX6-214ENST00000531297 NOVA1P51513 510 aaKnown RBP3.79□□□□□ -1.8
SOX6-214ENST00000531297 PLA2G16P53816 162 aa3.79□□□□□ -1.8
SOX6-214ENST00000531297 GFERP55789 205 aa3.79□□□□□ -1.8
SOX6-214ENST00000531297 BTN3A2P78410 334 aa3.79□□□□□ -1.8
SOX6-214ENST00000531297 MS4A2Q01362 244 aa3.79□□□□□ -1.8
SOX6-214ENST00000531297 HMGCS1Q01581 520 aa3.79□□□□□ -1.8
SOX6-214ENST00000531297 ZFP36L1Q07352 338 aaKnown RBP3.79□□□□□ -1.8
SOX6-214ENST00000531297 C2orf80Q0P641 193 aa3.79□□□□□ -1.8
SOX6-214ENST00000531297 TBL3Q12788 808 aaKnown RBP3.79□□□□□ -1.8
SOX6-214ENST00000531297 ART3Q13508 389 aa3.79□□□□□ -1.8
SOX6-214ENST00000531297 CYLC2Q14093 348 aaPredicted RBP3.79□□□□□ -1.8
SOX6-214ENST00000531297 RCAN2Q14206 197 aa3.79□□□□□ -1.8
SOX6-214ENST00000531297 KCNAB1Q14722 419 aa3.79□□□□□ -1.8
SOX6-214ENST00000531297 RCN1Q15293 331 aa3.79□□□□□ -1.8
SOX6-214ENST00000531297 ZIC1Q15915 447 aa3.79□□□□□ -1.8
SOX6-214ENST00000531297 C3orf38Q5JPI3 329 aa3.79□□□□□ -1.8
SOX6-214ENST00000531297 CPTPQ5TA50 214 aa3.79□□□□□ -1.8
SOX6-214ENST00000531297 IRAK1BP1Q5VVH5 260 aa3.79□□□□□ -1.8
SOX6-214ENST00000531297 IL23RQ5VWK5 629 aa3.79□□□□□ -1.8
SOX6-214ENST00000531297 NOXRED1Q6NXP6 359 aa3.79□□□□□ -1.8
SOX6-214ENST00000531297 BHLHB9Q6PI77 547 aa3.79□□□□□ -1.8
SOX6-214ENST00000531297 SCIMPQ6UWF3 145 aa3.79□□□□□ -1.8
SOX6-214ENST00000531297 MSANTD1Q6ZTZ1 278 aa3.79□□□□□ -1.8
SOX6-214ENST00000531297 RAB11FIP2Q7L804 512 aa3.79□□□□□ -1.8
SOX6-214ENST00000531297 COMMD6Q7Z4G1 85 aa3.79□□□□□ -1.8
SOX6-214ENST00000531297 GPR180Q86V85 440 aa3.79□□□□□ -1.8
SOX6-214ENST00000531297 HPS6Q86YV9 775 aa3.79□□□□□ -1.8
SOX6-214ENST00000531297 PLD3Q8IV08 490 aa3.79□□□□□ -1.8
SOX6-214ENST00000531297 DEFB107AQ8IZN7 70 aa3.79□□□□□ -1.8
SOX6-214ENST00000531297 FBXW8Q8N3Y1 598 aa3.79□□□□□ -1.8
SOX6-214ENST00000531297 ZCCHC7Q8N3Z6 543 aaKnown RBP3.79□□□□□ -1.8
SOX6-214ENST00000531297 LIX1Q8N485 282 aa3.79□□□□□ -1.8
SOX6-214ENST00000531297 C1orf52Q8N6N3 182 aaKnown RBP3.79□□□□□ -1.8
SOX6-214ENST00000531297 ZNF740Q8NDX6 193 aa3.79□□□□□ -1.8
SOX6-214ENST00000531297 DEFB124Q8NES8 71 aa3.79□□□□□ -1.8
SOX6-214ENST00000531297 CDC26Q8NHZ8 85 aa3.79□□□□□ -1.8
SOX6-214ENST00000531297 FLVCR1-AS1Q8TAF5 88 aa3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms