RNA–Protein interactions for RNA: ENST00000531014.5

CTNND1-229, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,053 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-229ENST00000531014 CNIH2Q6PI25 160 aa6.86□□□□□ -1.31
CTNND1-229ENST00000531014 BTNL8Q6UX41 500 aa6.86□□□□□ -1.31
CTNND1-229ENST00000531014 LDB1Q86U70 411 aaPredicted RBP6.86□□□□□ -1.31
CTNND1-229ENST00000531014 TMEM104Q8NE00 496 aa6.86□□□□□ -1.31
CTNND1-229ENST00000531014 CYP2W1Q8TAV3 490 aa6.86□□□□□ -1.31
CTNND1-229ENST00000531014 TRMT2BQ96GJ1 504 aaKnown RBP6.86□□□□□ -1.31
CTNND1-229ENST00000531014 IGSF21Q96ID5 467 aa6.86□□□□□ -1.31
CTNND1-229ENST00000531014 ZNF587Q96SQ5 575 aaPredicted RBP6.86□□□□□ -1.31
CTNND1-229ENST00000531014 UTS2RQ9UKP6 389 aa6.86□□□□□ -1.31
CTNND1-229ENST00000531014 SCN7AQ01118 1682 aa6.86□□□□□ -1.31
CTNND1-229ENST00000531014 PEAK1Q9H792 1746 aa6.86□□□□□ -1.31
CTNND1-229ENST00000531014 A0A0U1RQF3 1178 aa6.85□□□□□ -1.31
CTNND1-229ENST00000531014 LRRC10BA6NIK2 292 aa6.85□□□□□ -1.31
CTNND1-229ENST00000531014 K7ERQ8 282 aa6.85□□□□□ -1.31
CTNND1-229ENST00000531014 CLEC3BP05452 202 aa6.85□□□□□ -1.31
CTNND1-229ENST00000531014 ZNF43P17038 809 aa6.85□□□□□ -1.31
CTNND1-229ENST00000531014 MTNR1AP48039 350 aa6.85□□□□□ -1.31
CTNND1-229ENST00000531014 MEOX1P50221 254 aa6.85□□□□□ -1.31
CTNND1-229ENST00000531014 YBEYP58557 167 aaPredicted RBP6.85□□□□□ -1.31
CTNND1-229ENST00000531014 H3F3AP84243 136 aa6.85□□□□□ -1.31
CTNND1-229ENST00000531014 AMZ1Q400G9 498 aa6.85□□□□□ -1.31
CTNND1-229ENST00000531014 VASH1Q7L8A9 365 aaPredicted RBP6.85□□□□□ -1.31
CTNND1-229ENST00000531014 C11orf42Q8N5U0 333 aa6.85□□□□□ -1.31
CTNND1-229ENST00000531014 HORMAD2Q8N7B1 307 aa6.85□□□□□ -1.31
CTNND1-229ENST00000531014 KDF1Q8NAX2 398 aaPredicted RBP6.85□□□□□ -1.31
CTNND1-229ENST00000531014 CAMKVQ8NCB2 501 aa6.85□□□□□ -1.31
CTNND1-229ENST00000531014 CMTM2Q8TAZ6 248 aa6.85□□□□□ -1.31
CTNND1-229ENST00000531014 MARC2Q969Z3 335 aa6.85□□□□□ -1.31
CTNND1-229ENST00000531014 LMF1Q96S06 567 aa6.85□□□□□ -1.31
CTNND1-229ENST00000531014 FAM103A1Q9BTL3 118 aaKnown RBP6.85□□□□□ -1.31
CTNND1-229ENST00000531014 SLC25A51Q9H1U9 297 aa6.85□□□□□ -1.31
CTNND1-229ENST00000531014 TMEM134Q9H6X4 195 aa6.85□□□□□ -1.31
CTNND1-229ENST00000531014 PSAT1Q9Y617 370 aa6.85□□□□□ -1.31
CTNND1-229ENST00000531014 SCN11AQ9UI33 1791 aa6.85□□□□□ -1.31
CTNND1-229ENST00000531014 TRAV20A0A0B4J274 112 aa6.85□□□□□ -1.31
CTNND1-229ENST00000531014 SAP18O00422 153 aaKnown RBP6.85□□□□□ -1.31
CTNND1-229ENST00000531014 PDGFBP01127 241 aaPredicted RBP6.85□□□□□ -1.31
CTNND1-229ENST00000531014 PCCBP05166 539 aa6.85□□□□□ -1.31
CTNND1-229ENST00000531014 RD3LP0DJH9 198 aa6.85□□□□□ -1.31
CTNND1-229ENST00000531014 AGXTP21549 392 aa6.85□□□□□ -1.31
CTNND1-229ENST00000531014 HBG1P69891 147 aa6.85□□□□□ -1.31
CTNND1-229ENST00000531014 HBG2P69892 147 aa6.85□□□□□ -1.31
CTNND1-229ENST00000531014 SORDQ00796 357 aa6.85□□□□□ -1.31
CTNND1-229ENST00000531014 TAP2Q03519 686 aa6.85□□□□□ -1.31
CTNND1-229ENST00000531014 SNTB1Q13884 538 aaKnown RBP6.85□□□□□ -1.31
CTNND1-229ENST00000531014 PCBP2Q15366 365 aaKnown RBP eCLIP6.85□□□□□ -1.318e-9■■■■□ 26.6
CTNND1-229ENST00000531014 FRG2Q64ET8 278 aa6.85□□□□□ -1.31
CTNND1-229ENST00000531014 TMEM220Q6QAJ8 160 aa6.85□□□□□ -1.31
CTNND1-229ENST00000531014 B3GNT9Q6UX72 402 aa6.85□□□□□ -1.31
CTNND1-229ENST00000531014 LFNGQ8NES3 379 aa6.85□□□□□ -1.31
CTNND1-229ENST00000531014 NDNFQ8TB73 568 aa6.85□□□□□ -1.31
CTNND1-229ENST00000531014 C2CD4CQ8TF44 421 aa6.85□□□□□ -1.31
CTNND1-229ENST00000531014 SLC45A3Q96JT2 553 aa6.85□□□□□ -1.31
CTNND1-229ENST00000531014 FRG2BQ96QU4 278 aa6.85□□□□□ -1.31
CTNND1-229ENST00000531014 SEC22CQ9BRL7 303 aa6.85□□□□□ -1.31
CTNND1-229ENST00000531014 THAP7Q9BT49 309 aaPredicted RBP6.85□□□□□ -1.31
CTNND1-229ENST00000531014 NOX3Q9HBY0 568 aa6.85□□□□□ -1.31
CTNND1-229ENST00000531014 BABAM2Q9NXR7 383 aa6.85□□□□□ -1.31
CTNND1-229ENST00000531014 V9GYS6 101 aa6.85□□□□□ -1.31
CTNND1-229ENST00000531014 METTL15A6NJ78 407 aa6.85□□□□□ -1.31
CTNND1-229ENST00000531014 H7BYZ3 331 aa6.85□□□□□ -1.31
CTNND1-229ENST00000531014 SURF4O15260 269 aa6.85□□□□□ -1.31
CTNND1-229ENST00000531014 PAGE1O75459 146 aa6.85□□□□□ -1.31
CTNND1-229ENST00000531014 LYPLA2O95372 231 aa6.85□□□□□ -1.31
CTNND1-229ENST00000531014 TYRP14679 529 aa6.85□□□□□ -1.31
CTNND1-229ENST00000531014 HTR3AP46098 478 aa6.85□□□□□ -1.31
CTNND1-229ENST00000531014 F2RL1P55085 397 aa6.85□□□□□ -1.31
CTNND1-229ENST00000531014 HMGCS1Q01581 520 aa6.85□□□□□ -1.31
CTNND1-229ENST00000531014 PIGFQ07326 219 aa6.85□□□□□ -1.31
CTNND1-229ENST00000531014 SLC25A52Q3SY17 297 aa6.85□□□□□ -1.31
CTNND1-229ENST00000531014 HSF5Q4G112 596 aaPredicted RBP6.85□□□□□ -1.31
CTNND1-229ENST00000531014 EARS2Q5JPH6 523 aaKnown RBP6.85□□□□□ -1.31
CTNND1-229ENST00000531014 RTL6Q6ICC9 239 aa6.85□□□□□ -1.31
CTNND1-229ENST00000531014 LRP10Q7Z4F1 713 aa6.85□□□□□ -1.31
CTNND1-229ENST00000531014 NPAS3Q8IXF0 933 aa6.85□□□□□ -1.31
CTNND1-229ENST00000531014 C1orf52Q8N6N3 182 aaKnown RBP6.85□□□□□ -1.31
CTNND1-229ENST00000531014 PLD5Q8N7P1 536 aa6.85□□□□□ -1.31
CTNND1-229ENST00000531014 BPIFCQ8NFQ6 507 aa6.85□□□□□ -1.31
CTNND1-229ENST00000531014 OR9A4Q8NGU2 314 aa6.85□□□□□ -1.31
CTNND1-229ENST00000531014 OR5B3Q8NH48 314 aa6.85□□□□□ -1.31
CTNND1-229ENST00000531014 TBC1D20Q96BZ9 403 aa6.85□□□□□ -1.31
CTNND1-229ENST00000531014 OXSMQ9NWU1 459 aa6.85□□□□□ -1.31
CTNND1-229ENST00000531014 RHCGQ9UBD6 479 aa6.85□□□□□ -1.31
CTNND1-229ENST00000531014 SLC2A6Q9UGQ3 507 aa6.85□□□□□ -1.31
CTNND1-229ENST00000531014 SH3BGRL2Q9UJC5 107 aa6.85□□□□□ -1.31
CTNND1-229ENST00000531014 FBXL4Q9UKA2 621 aa6.85□□□□□ -1.31
CTNND1-229ENST00000531014 RIPK3Q9Y572 518 aa6.85□□□□□ -1.31
CTNND1-229ENST00000531014 CEPT1Q9Y6K0 416 aa6.85□□□□□ -1.31
CTNND1-229ENST00000531014 GABRDO14764 452 aa6.85□□□□□ -1.31
CTNND1-229ENST00000531014 ADAMTS4O75173 837 aa6.85□□□□□ -1.31
CTNND1-229ENST00000531014 TTRP02766 147 aa6.85□□□□□ -1.31
CTNND1-229ENST00000531014 PIM1P11309 404 aaPredicted RBP6.85□□□□□ -1.31
CTNND1-229ENST00000531014 NME2P22392 152 aa6.85□□□□□ -1.31
CTNND1-229ENST00000531014 CPT2P23786 658 aa6.85□□□□□ -1.31
CTNND1-229ENST00000531014 CASP3P42574 277 aa6.85□□□□□ -1.31
CTNND1-229ENST00000531014 AMTP48728 403 aa6.85□□□□□ -1.31
CTNND1-229ENST00000531014 RPL7AP62424 266 aaKnown RBP6.85□□□□□ -1.31
CTNND1-229ENST00000531014 RAP1AP62834 184 aa6.85□□□□□ -1.31
CTNND1-229ENST00000531014 LAPTM4AQ15012 233 aa6.85□□□□□ -1.31
CTNND1-229ENST00000531014 BEX5Q5H9J7 111 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms