RNA–Protein interactions for RNA: ENST00000530906.1

PCF11-205, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 3

Gene PCF11, Length 628 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-205ENST00000530906 ZNF730Q6ZMV8 503 aa5.17□□□□□ -1.58
PCF11-205ENST00000530906 PLEKHM3Q6ZWE6 761 aa5.17□□□□□ -1.58
PCF11-205ENST00000530906 MBOAT2Q6ZWT7 520 aa5.17□□□□□ -1.58
PCF11-205ENST00000530906 ZER1Q7Z7L7 766 aa5.17□□□□□ -1.58
PCF11-205ENST00000530906 SLCO6A1Q86UG4 719 aa5.17□□□□□ -1.58
PCF11-205ENST00000530906 SLC22A18ASQ8N1D0 253 aa5.17□□□□□ -1.58
PCF11-205ENST00000530906 CAMKK1Q8N5S9 505 aa5.17□□□□□ -1.58
PCF11-205ENST00000530906 COX18Q8N8Q8 333 aa5.17□□□□□ -1.58
PCF11-205ENST00000530906 C19orf47Q8N9M1 422 aaKnown RBP5.17□□□□□ -1.58
PCF11-205ENST00000530906 OR7G2Q8NG99 324 aa5.17□□□□□ -1.58
PCF11-205ENST00000530906 OR4D11Q8NGI4 311 aa5.17□□□□□ -1.58
PCF11-205ENST00000530906 CCL4L1Q8NHW4 92 aa5.17□□□□□ -1.58
PCF11-205ENST00000530906 WDR36Q8NI36 951 aaKnown RBP5.17□□□□□ -1.58
PCF11-205ENST00000530906 TMEM163Q8TC26 289 aa5.17□□□□□ -1.58
PCF11-205ENST00000530906 CHPT1Q8WUD6 406 aa5.17□□□□□ -1.58
PCF11-205ENST00000530906 SGCDQ92629 289 aa5.17□□□□□ -1.58
PCF11-205ENST00000530906 MVB12AQ96EY5 273 aa5.17□□□□□ -1.58
PCF11-205ENST00000530906 SLC35A4Q96G79 324 aa5.17□□□□□ -1.58
PCF11-205ENST00000530906 SH3YL1Q96HL8 342 aaPredicted RBP5.17□□□□□ -1.58
PCF11-205ENST00000530906 PLEKHA8Q96JA3 519 aa5.17□□□□□ -1.58
PCF11-205ENST00000530906 ZNF285Q96NJ3 590 aa5.17□□□□□ -1.58
PCF11-205ENST00000530906 CSF3RQ99062 836 aa5.17□□□□□ -1.58
PCF11-205ENST00000530906 SDF2Q99470 211 aa5.17□□□□□ -1.58
PCF11-205ENST00000530906 MGLLQ99685 303 aa5.17□□□□□ -1.58
PCF11-205ENST00000530906 NRTNQ99748 197 aa5.17□□□□□ -1.58
PCF11-205ENST00000530906 ZNF559Q9BR84 538 aa5.17□□□□□ -1.58
PCF11-205ENST00000530906 JAM3Q9BX67 310 aa5.17□□□□□ -1.58
PCF11-205ENST00000530906 NXF2Q9GZY0 626 aaKnown RBP5.17□□□□□ -1.58
PCF11-205ENST00000530906 DCSTAMPQ9H295 470 aa5.17□□□□□ -1.58
PCF11-205ENST00000530906 FN3KQ9H479 309 aa5.17□□□□□ -1.58
PCF11-205ENST00000530906 FGF20Q9NP95 211 aaPredicted RBP5.17□□□□□ -1.58
PCF11-205ENST00000530906 AKIP1Q9NQ31 210 aa5.17□□□□□ -1.58
PCF11-205ENST00000530906 CHCHD3Q9NX63 227 aaKnown RBP5.17□□□□□ -1.58
PCF11-205ENST00000530906 GPR83Q9NYM4 423 aa5.17□□□□□ -1.58
PCF11-205ENST00000530906 IL20Q9NYY1 176 aa5.17□□□□□ -1.58
PCF11-205ENST00000530906 DIMT1Q9UNQ2 313 aaKnown RBP5.17□□□□□ -1.58
PCF11-205ENST00000530906 BAIAP2Q9UQB8 552 aa5.17□□□□□ -1.58
PCF11-205ENST00000530906 CA5BQ9Y2D0 317 aa5.17□□□□□ -1.58
PCF11-205ENST00000530906 EXOSC1Q9Y3B2 195 aaKnown RBP5.17□□□□□ -1.58
PCF11-205ENST00000530906 NINQ8N4C6 2090 aa5.16□□□□□ -1.58
PCF11-205ENST00000530906 ATG2BQ96BY7 2078 aa5.16□□□□□ -1.58
PCF11-205ENST00000530906 ARHGEF17Q96PE2 2063 aaPredicted RBP5.16□□□□□ -1.58
PCF11-205ENST00000530906 A0A075B6Q4 140 aa5.16□□□□□ -1.58
PCF11-205ENST00000530906 A0A087WUU8 490 aa5.16□□□□□ -1.58
PCF11-205ENST00000530906 LOC105369274A0A096LPK9 316 aa5.16□□□□□ -1.58
PCF11-205ENST00000530906 IGHV1OR15-9A0A0B4J2B8 117 aa5.16□□□□□ -1.58
PCF11-205ENST00000530906 LOC102723532A0A0G2JNH3 316 aa5.16□□□□□ -1.58
PCF11-205ENST00000530906 A0A1W2PR77 199 aa5.16□□□□□ -1.58
PCF11-205ENST00000530906 CDHR4A6H8M9 788 aa5.16□□□□□ -1.58
PCF11-205ENST00000530906 ANKRD33BA6NCL7 494 aa5.16□□□□□ -1.58
PCF11-205ENST00000530906 TLCD2A6NGC4 264 aa5.16□□□□□ -1.58
PCF11-205ENST00000530906 KDM4EB2RXH2 506 aaPredicted RBP5.16□□□□□ -1.58
PCF11-205ENST00000530906 LMO7DNF2Z398 122 aa5.16□□□□□ -1.58
PCF11-205ENST00000530906 H0YIG0 161 aa5.16□□□□□ -1.58
PCF11-205ENST00000530906 H3BS24 57 aa5.16□□□□□ -1.58
PCF11-205ENST00000530906 KPNA4O00629 521 aaPredicted RBP5.16□□□□□ -1.58
PCF11-205ENST00000530906 MYL12BO14950 172 aa5.16□□□□□ -1.58
PCF11-205ENST00000530906 KLF4O43474 513 aa5.16□□□□□ -1.58
PCF11-205ENST00000530906 CHST10O43529 356 aa5.16□□□□□ -1.58
PCF11-205ENST00000530906 OR10H2O60403 315 aa5.16□□□□□ -1.58
PCF11-205ENST00000530906 BRINP1O60477 761 aa5.16□□□□□ -1.58
PCF11-205ENST00000530906 PRAMEF2O60811 474 aa5.16□□□□□ -1.58
PCF11-205ENST00000530906 CTNSO60931 367 aa5.16□□□□□ -1.58
PCF11-205ENST00000530906 ENTPD6O75354 484 aa5.16□□□□□ -1.58
PCF11-205ENST00000530906 PRKRAO75569 313 aaKnown RBP5.16□□□□□ -1.58
PCF11-205ENST00000530906 RCBTB2O95199 551 aa5.16□□□□□ -1.58
PCF11-205ENST00000530906 EPPINO95925 133 aa5.16□□□□□ -1.58
PCF11-205ENST00000530906 IGF2P01344 180 aa5.16□□□□□ -1.58
PCF11-205ENST00000530906 TP53P04637 393 aaPredicted RBP5.16□□□□□ -1.58
PCF11-205ENST00000530906 PROS1P07225 676 aa5.16□□□□□ -1.58
PCF11-205ENST00000530906 C8orf89P0DMQ9 161 aa5.16□□□□□ -1.58
PCF11-205ENST00000530906 ACP2P11117 423 aa5.16□□□□□ -1.58
PCF11-205ENST00000530906 DBTP11182 482 aaKnown RBP5.16□□□□□ -1.58
PCF11-205ENST00000530906 POU2F1P14859 743 aa5.16□□□□□ -1.58
PCF11-205ENST00000530906 MYL12AP19105 171 aa5.16□□□□□ -1.58
PCF11-205ENST00000530906 NT5EP21589 574 aa5.16□□□□□ -1.58
PCF11-205ENST00000530906 CDH3P22223 829 aa5.16□□□□□ -1.58
PCF11-205ENST00000530906 GALP22466 123 aa5.16□□□□□ -1.58
PCF11-205ENST00000530906 PSMA1P25786 263 aaKnown RBP5.16□□□□□ -1.58
PCF11-205ENST00000530906 CD38P28907 300 aa5.16□□□□□ -1.58
PCF11-205ENST00000530906 C21orf33P30042 268 aaPredicted RBP5.16□□□□□ -1.58
PCF11-205ENST00000530906 S100A5P33763 92 aa5.16□□□□□ -1.58
PCF11-205ENST00000530906 GRK5P34947 590 aa5.16□□□□□ -1.58
PCF11-205ENST00000530906 LIPAP38571 399 aa5.16□□□□□ -1.58
PCF11-205ENST00000530906 STT3AP46977 705 aa5.16□□□□□ -1.58
PCF11-205ENST00000530906 PDX1P52945 283 aa5.16□□□□□ -1.58
PCF11-205ENST00000530906 LIMK1P53667 647 aa5.16□□□□□ -1.58
PCF11-205ENST00000530906 HSD17B7P56937 341 aa5.16□□□□□ -1.58
PCF11-205ENST00000530906 EEF1A1P68104 462 aaKnown RBP5.16□□□□□ -1.58
PCF11-205ENST00000530906 POU6F2P78424 691 aaPredicted RBP5.16□□□□□ -1.58
PCF11-205ENST00000530906 SIM1P81133 766 aaPredicted RBP5.16□□□□□ -1.58
PCF11-205ENST00000530906 BDH1Q02338 343 aa5.16□□□□□ -1.58
PCF11-205ENST00000530906 ZNF45Q02386 682 aa5.16□□□□□ -1.58
PCF11-205ENST00000530906 ZNF91Q05481 1191 aa5.16□□□□□ -1.58
PCF11-205ENST00000530906 PRKCDQ05655 676 aa5.16□□□□□ -1.58
PCF11-205ENST00000530906 DUSP2Q05923 314 aa5.16□□□□□ -1.58
PCF11-205ENST00000530906 PIGFQ07326 219 aa5.16□□□□□ -1.58
PCF11-205ENST00000530906 GINS1Q14691 196 aa5.16□□□□□ -1.58
PCF11-205ENST00000530906 SPHARQ15513 63 aa5.16□□□□□ -1.58
PCF11-205ENST00000530906 LTB4RQ15722 352 aa5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms