RNA–Protein interactions for RNA: ENST00000528768.5

USF1-208, Transcript of upstream transcription factor 1, humanhuman

TSL 3

Gene USF1, Length 505 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-208ENST00000528768 GPR83Q9NYM4 423 aa10.93□□□□□ -0.66
USF1-208ENST00000528768 POMT2Q9UKY4 750 aa10.93□□□□□ -0.66
USF1-208ENST00000528768 ZNF443Q9Y2A4 671 aaPredicted RBP10.93□□□□□ -0.66
USF1-208ENST00000528768 ANKRD17O75179 2603 aaKnown RBP10.92□□□□□ -0.66
USF1-208ENST00000528768 CCDC187A0A096LP49 1063 aa10.92□□□□□ -0.66
USF1-208ENST00000528768 LOC105369274A0A096LPK9 316 aa10.92□□□□□ -0.66
USF1-208ENST00000528768 LOC102723532A0A0G2JNH3 316 aa10.92□□□□□ -0.66
USF1-208ENST00000528768 TTC36A6NLP5 189 aa10.92□□□□□ -0.66
USF1-208ENST00000528768 TMX2-CTNND1H3BSU7 103 aa10.92□□□□□ -0.66
USF1-208ENST00000528768 OR10H2O60403 315 aa10.92□□□□□ -0.66
USF1-208ENST00000528768 MAN1A2O60476 641 aa10.92□□□□□ -0.66
USF1-208ENST00000528768 PIAS2O75928 621 aa10.92□□□□□ -0.66
USF1-208ENST00000528768 TNFSF15O95150 251 aa10.92□□□□□ -0.66
USF1-208ENST00000528768 LCKP06239 509 aa10.92□□□□□ -0.66
USF1-208ENST00000528768 SLC35E2P0CK97 266 aa10.92□□□□□ -0.66
USF1-208ENST00000528768 MYF5P13349 255 aa10.92□□□□□ -0.66
USF1-208ENST00000528768 TNNI3P19429 210 aa10.92□□□□□ -0.66
USF1-208ENST00000528768 PCYT1AP49585 367 aa10.92□□□□□ -0.66
USF1-208ENST00000528768 NUDT6P53370 316 aa10.92□□□□□ -0.66
USF1-208ENST00000528768 VSX2P58304 361 aaPredicted RBP10.92□□□□□ -0.66
USF1-208ENST00000528768 HNRNPKP61978 463 aaKnown RBP eCLIP10.92□□□□□ -0.66
USF1-208ENST00000528768 RHAGQ02094 409 aa10.92□□□□□ -0.66
USF1-208ENST00000528768 DUSP2Q05923 314 aa10.92□□□□□ -0.66
USF1-208ENST00000528768 FUT5Q11128 374 aa10.92□□□□□ -0.66
USF1-208ENST00000528768 TSPAN31Q12999 210 aa10.92□□□□□ -0.66
USF1-208ENST00000528768 DUSP8Q13202 625 aa10.92□□□□□ -0.66
USF1-208ENST00000528768 BIKQ13323 160 aa10.92□□□□□ -0.66
USF1-208ENST00000528768 IRF3Q14653 427 aa10.92□□□□□ -0.66
USF1-208ENST00000528768 GINS1Q14691 196 aa10.92□□□□□ -0.66
USF1-208ENST00000528768 ZNF628Q5EBL2 1059 aa10.92□□□□□ -0.66
USF1-208ENST00000528768 MFSD4BQ5TF39 518 aa10.92□□□□□ -0.66
USF1-208ENST00000528768 SLC46A3Q7Z3Q1 461 aa10.92□□□□□ -0.66
USF1-208ENST00000528768 LACC1Q8IV20 430 aa10.92□□□□□ -0.66
USF1-208ENST00000528768 OR4N4Q8N0Y3 316 aa10.92□□□□□ -0.66
USF1-208ENST00000528768 CA13Q8N1Q1 262 aa10.92□□□□□ -0.66
USF1-208ENST00000528768 ZNF619Q8N2I2 560 aa10.92□□□□□ -0.66
USF1-208ENST00000528768 FAM26EQ8N5C1 309 aa10.92□□□□□ -0.66
USF1-208ENST00000528768 AMER2Q8N7J2 671 aa10.92□□□□□ -0.66
USF1-208ENST00000528768 COX18Q8N8Q8 333 aa10.92□□□□□ -0.66
USF1-208ENST00000528768 C19orf47Q8N9M1 422 aaKnown RBP10.92□□□□□ -0.66
USF1-208ENST00000528768 ACOT11Q8WXI4 607 aaPredicted RBP10.92□□□□□ -0.66
USF1-208ENST00000528768 CDS1Q92903 461 aa10.92□□□□□ -0.66
USF1-208ENST00000528768 EXTL1Q92935 676 aa10.92□□□□□ -0.66
USF1-208ENST00000528768 PPP1R14BQ96C90 147 aa10.92□□□□□ -0.66
USF1-208ENST00000528768 TCTN2Q96GX1 697 aa10.92□□□□□ -0.66
USF1-208ENST00000528768 PLEKHA8Q96JA3 519 aa10.92□□□□□ -0.66
USF1-208ENST00000528768 MCHR1Q99705 422 aa10.92□□□□□ -0.66
USF1-208ENST00000528768 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP10.92□□□□□ -0.66
USF1-208ENST00000528768 CSNK1G3Q9Y6M4 447 aa10.92□□□□□ -0.66
USF1-208ENST00000528768 A3GALT2U3KPV4 340 aa10.92□□□□□ -0.66
USF1-208ENST00000528768 LILRA5A6NI73 299 aa10.91□□□□□ -0.66
USF1-208ENST00000528768 B4DGG1 531 aa10.91□□□□□ -0.66
USF1-208ENST00000528768 CLDN4O14493 209 aa10.91□□□□□ -0.66
USF1-208ENST00000528768 EFSO43281 561 aa10.91□□□□□ -0.66
USF1-208ENST00000528768 HMGN1P05114 100 aa10.91□□□□□ -0.66
USF1-208ENST00000528768 GUSBP08236 651 aa10.91□□□□□ -0.66
USF1-208ENST00000528768 ADORA3P0DMS8 318 aa10.91□□□□□ -0.66
USF1-208ENST00000528768 RNH1P13489 461 aaKnown RBP10.91□□□□□ -0.66
USF1-208ENST00000528768 MMP11P24347 488 aa10.91□□□□□ -0.66
USF1-208ENST00000528768 C21orf33P30042 268 aaPredicted RBP10.91□□□□□ -0.66
USF1-208ENST00000528768 AVPR1BP47901 424 aa10.91□□□□□ -0.66
USF1-208ENST00000528768 GIPRP48546 466 aa10.91□□□□□ -0.66
USF1-208ENST00000528768 PPM1FP49593 454 aaPredicted RBP10.91□□□□□ -0.66
USF1-208ENST00000528768 PDX1P52945 283 aa10.91□□□□□ -0.66
USF1-208ENST00000528768 POU6F2P78424 691 aaPredicted RBP10.91□□□□□ -0.66
USF1-208ENST00000528768 AQP6Q13520 282 aa10.91□□□□□ -0.66
USF1-208ENST00000528768 C11orf91Q3C1V1 193 aa10.91□□□□□ -0.66
USF1-208ENST00000528768 ARMCX4Q5H9R4 360 aa10.91□□□□□ -0.66
USF1-208ENST00000528768 GARNL3Q5VVW2 1013 aa10.91□□□□□ -0.66
USF1-208ENST00000528768 TMEM236Q5W0B7 351 aa10.91□□□□□ -0.66
USF1-208ENST00000528768 SLC27A4Q6P1M0 643 aa10.91□□□□□ -0.66
USF1-208ENST00000528768 RASSF6Q6ZTQ3 369 aa10.91□□□□□ -0.66
USF1-208ENST00000528768 VRK2Q86Y07 508 aa10.91□□□□□ -0.66
USF1-208ENST00000528768 MCATQ8IVS2 390 aaKnown RBP10.91□□□□□ -0.66
USF1-208ENST00000528768 CDK20Q8IZL9 346 aa10.91□□□□□ -0.66
USF1-208ENST00000528768 TMCO5AQ8N6Q1 288 aa10.91□□□□□ -0.66
USF1-208ENST00000528768 MORN4Q8NDC4 146 aa10.91□□□□□ -0.66
USF1-208ENST00000528768 FNDC8Q8TC99 324 aa10.91□□□□□ -0.66
USF1-208ENST00000528768 RFKQ969G6 155 aa10.91□□□□□ -0.66
USF1-208ENST00000528768 LIN37Q96GY3 246 aaPredicted RBP10.91□□□□□ -0.66
USF1-208ENST00000528768 PSMG3-AS1Q96PY0 264 aa10.91□□□□□ -0.66
USF1-208ENST00000528768 SLC38A3Q99624 504 aa10.91□□□□□ -0.66
USF1-208ENST00000528768 PELOQ9BRX2 385 aaKnown RBP10.91□□□□□ -0.66
USF1-208ENST00000528768 MND1Q9BWT6 205 aa10.91□□□□□ -0.66
USF1-208ENST00000528768 KLHL25Q9H0H3 589 aa10.91□□□□□ -0.66
USF1-208ENST00000528768 AMBNQ9NP70 447 aa10.91□□□□□ -0.66
USF1-208ENST00000528768 ADAP2Q9NPF8 381 aa10.91□□□□□ -0.66
USF1-208ENST00000528768 UCKL1Q9NWZ5 548 aa10.91□□□□□ -0.66
USF1-208ENST00000528768 TVP23BQ9NYZ1 205 aa10.91□□□□□ -0.66
USF1-208ENST00000528768 EPHA6Q9UF33 1036 aa10.91□□□□□ -0.66
USF1-208ENST00000528768 MKLN1Q9UL63 735 aa10.91□□□□□ -0.66
USF1-208ENST00000528768 KCNE3Q9Y6H6 103 aa10.91□□□□□ -0.66
USF1-208ENST00000528768 DOCK9Q9BZ29 2069 aa10.91□□□□□ -0.66
USF1-208ENST00000528768 AGAP5A6NIR3 686 aa10.9□□□□□ -0.66
USF1-208ENST00000528768 CPSF4LA6NMK7 179 aaKnown RBP10.9□□□□□ -0.66
USF1-208ENST00000528768 CCRL2O00421 344 aa10.9□□□□□ -0.66
USF1-208ENST00000528768 CYR61O00622 381 aa10.9□□□□□ -0.66
USF1-208ENST00000528768 MYL12BO14950 172 aa10.9□□□□□ -0.66
USF1-208ENST00000528768 FMO6PO60774 539 aa10.9□□□□□ -0.66
USF1-208ENST00000528768 PFDN1O60925 122 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms