RNA–Protein interactions for RNA: ENST00000528516.5

LTBP3-210, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 1 (best)

Gene LTBP3, Length 3,935 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-210ENST00000528516 ZNF273Q14593 569 aa16.77■□□□□ 0.28
LTBP3-210ENST00000528516 PLBD1Q6P4A8 553 aa16.77■□□□□ 0.28
LTBP3-210ENST00000528516 METAP1DQ6UB28 335 aaPredicted RBP16.77■□□□□ 0.28
LTBP3-210ENST00000528516 MSANTD1Q6ZTZ1 278 aa16.77■□□□□ 0.28
LTBP3-210ENST00000528516 FAM220AQ7Z4H9 259 aa16.77■□□□□ 0.28
LTBP3-210ENST00000528516 SLC39A11Q8N1S5 342 aa16.77■□□□□ 0.28
LTBP3-210ENST00000528516 RPLP0P6Q8NHW5 317 aa16.77■□□□□ 0.28
LTBP3-210ENST00000528516 EID2BQ96D98 161 aa16.77■□□□□ 0.28
LTBP3-210ENST00000528516 C12orf57Q99622 126 aa16.77■□□□□ 0.28
LTBP3-210ENST00000528516 ZNF436Q9C0F3 470 aaPredicted RBP16.77■□□□□ 0.28
LTBP3-210ENST00000528516 LSM2Q9Y333 95 aaKnown RBP16.77■□□□□ 0.28
LTBP3-210ENST00000528516 NCOR1O75376 2440 aa16.77■□□□□ 0.27
LTBP3-210ENST00000528516 TCRBV16S1A1N1A0A5B0 115 aa16.77■□□□□ 0.27
LTBP3-210ENST00000528516 HEPACAM2A8MVW5 462 aa16.77■□□□□ 0.27
LTBP3-210ENST00000528516 H7C2Y5 167 aa16.77■□□□□ 0.27
LTBP3-210ENST00000528516 B3GALT2O43825 422 aa16.77■□□□□ 0.27
LTBP3-210ENST00000528516 ADAP00813 363 aa16.77■□□□□ 0.27
LTBP3-210ENST00000528516 SFRP4Q6FHJ7 346 aaPredicted RBP16.77■□□□□ 0.27
LTBP3-210ENST00000528516 LIMS2Q7Z4I7 341 aa16.77■□□□□ 0.27
LTBP3-210ENST00000528516 TCEAL8Q8IYN2 117 aa16.77■□□□□ 0.27
LTBP3-210ENST00000528516 OR4C15Q8NGM1 316 aa16.77■□□□□ 0.27
LTBP3-210ENST00000528516 TMEM5Q9Y2B1 443 aa16.77■□□□□ 0.27
LTBP3-210ENST00000528516 A0A1B0GVI7 797 aa16.77■□□□□ 0.27
LTBP3-210ENST00000528516 IFNGP01579 166 aa16.77■□□□□ 0.27
LTBP3-210ENST00000528516 SRPRAP08240 638 aaKnown RBP16.77■□□□□ 0.27
LTBP3-210ENST00000528516 CPEP16870 476 aa16.77■□□□□ 0.27
LTBP3-210ENST00000528516 MC3RP41968 323 aa16.77■□□□□ 0.27
LTBP3-210ENST00000528516 ST3GAL3Q11203 375 aa16.77■□□□□ 0.27
LTBP3-210ENST00000528516 FAM198BQ6UWH4 519 aa16.77■□□□□ 0.27
LTBP3-210ENST00000528516 KLHL36Q8N4N3 616 aa16.77■□□□□ 0.27
LTBP3-210ENST00000528516 HORMAD2Q8N7B1 307 aa16.77■□□□□ 0.27
LTBP3-210ENST00000528516 ZNF527Q8NB42 609 aa16.77■□□□□ 0.27
LTBP3-210ENST00000528516 C1orf216Q8TAB5 229 aa16.77■□□□□ 0.27
LTBP3-210ENST00000528516 OR2M2Q96R28 347 aa16.77■□□□□ 0.27
LTBP3-210ENST00000528516 ABCG4Q9H172 646 aa16.77■□□□□ 0.27
LTBP3-210ENST00000528516 USP36Q9P275 1121 aaKnown RBP16.77■□□□□ 0.27
LTBP3-210ENST00000528516 RPS10-NUDT3A0A1W2PQS6 291 aa16.76■□□□□ 0.27
LTBP3-210ENST00000528516 GMDSO60547 372 aa16.76■□□□□ 0.27
LTBP3-210ENST00000528516 MT-ND4P03905 459 aa16.76■□□□□ 0.27
LTBP3-210ENST00000528516 ADRB3P13945 408 aa16.76■□□□□ 0.27
LTBP3-210ENST00000528516 CERS1P27544 350 aa16.76■□□□□ 0.27
LTBP3-210ENST00000528516 ELAVL3Q14576 367 aaKnown RBP16.76■□□□□ 0.27
LTBP3-210ENST00000528516 ZNF783Q6ZMS7 281 aa16.76■□□□□ 0.27
LTBP3-210ENST00000528516 KIAA0907Q7Z7F0 614 aaPredicted RBP16.76■□□□□ 0.27
LTBP3-210ENST00000528516 OVCA2Q8WZ82 227 aa16.76■□□□□ 0.27
LTBP3-210ENST00000528516 ATF6BQ99941 703 aa16.76■□□□□ 0.27
LTBP3-210ENST00000528516 USB1Q9BQ65 265 aaKnown RBP16.76■□□□□ 0.27
LTBP3-210ENST00000528516 PDCD10Q9BUL8 212 aa16.76■□□□□ 0.27
LTBP3-210ENST00000528516 REV1Q9UBZ9 1251 aa16.76■□□□□ 0.27
LTBP3-210ENST00000528516 FBXL2Q9UKC9 423 aa16.76■□□□□ 0.27
LTBP3-210ENST00000528516 A0A0G2JMZ2 1700 aa16.76■□□□□ 0.27
LTBP3-210ENST00000528516 PPM1DO15297 605 aa16.76■□□□□ 0.27
LTBP3-210ENST00000528516 ETHE1O95571 254 aa16.76■□□□□ 0.27
LTBP3-210ENST00000528516 RAB3AP20336 220 aa16.76■□□□□ 0.27
LTBP3-210ENST00000528516 WNT3P56703 355 aa16.76■□□□□ 0.27
LTBP3-210ENST00000528516 TSEN54Q7Z6J9 526 aaKnown RBP16.76■□□□□ 0.27
LTBP3-210ENST00000528516 CXorf58Q96LI9 332 aa16.76■□□□□ 0.27
LTBP3-210ENST00000528516 BTNL2Q9UIR0 455 aa16.76■□□□□ 0.27
LTBP3-210ENST00000528516 SCP2D1Q9UJQ7 156 aa16.76■□□□□ 0.27
LTBP3-210ENST00000528516 MGAT4BQ9UQ53 548 aa16.76■□□□□ 0.27
LTBP3-210ENST00000528516 EDDM13A0A1B0GTR0 161 aa16.76■□□□□ 0.27
LTBP3-210ENST00000528516 CARNS1A5YM72 827 aa16.76■□□□□ 0.27
LTBP3-210ENST00000528516 RAD1O60671 282 aa16.76■□□□□ 0.27
LTBP3-210ENST00000528516 IGHA2P01877 340 aa16.76■□□□□ 0.27
LTBP3-210ENST00000528516 METAP1P53582 386 aa16.76■□□□□ 0.27
LTBP3-210ENST00000528516 CRYBA2P53672 197 aa16.76■□□□□ 0.27
LTBP3-210ENST00000528516 B2MP61769 119 aa16.76■□□□□ 0.27
LTBP3-210ENST00000528516 WDR5P61964 334 aaKnown RBP16.76■□□□□ 0.27
LTBP3-210ENST00000528516 CD276Q5ZPR3 534 aa16.76■□□□□ 0.27
LTBP3-210ENST00000528516 GPR135Q8IZ08 494 aa16.76■□□□□ 0.27
LTBP3-210ENST00000528516 BADQ92934 168 aa16.76■□□□□ 0.27
LTBP3-210ENST00000528516 C16orf58Q96GQ5 468 aa16.76■□□□□ 0.27
LTBP3-210ENST00000528516 SAMD11Q96NU1 681 aa16.76■□□□□ 0.27
LTBP3-210ENST00000528516 MCIDASD6RGH6 385 aa16.75■□□□□ 0.27
LTBP3-210ENST00000528516 TMEM189-UBE2V1I3L0A0 370 aa16.75■□□□□ 0.27
LTBP3-210ENST00000528516 GPR37L1O60883 481 aa16.75■□□□□ 0.27
LTBP3-210ENST00000528516 MPC1LP0DKB6 136 aa16.75■□□□□ 0.27
LTBP3-210ENST00000528516 PVRP15151 417 aa16.75■□□□□ 0.27
LTBP3-210ENST00000528516 CR2P20023 1033 aa16.75■□□□□ 0.27
LTBP3-210ENST00000528516 GABRA3P34903 492 aa16.75■□□□□ 0.27
LTBP3-210ENST00000528516 GUCA1AP43080 201 aaPredicted RBP16.75■□□□□ 0.27
LTBP3-210ENST00000528516 GDI2P50395 445 aaKnown RBP16.75■□□□□ 0.27
LTBP3-210ENST00000528516 RIN1Q13671 783 aa16.75■□□□□ 0.27
LTBP3-210ENST00000528516 GRHL2Q6ISB3 625 aa16.75■□□□□ 0.27
LTBP3-210ENST00000528516 LRFN4Q6PJG9 635 aa16.75■□□□□ 0.27
LTBP3-210ENST00000528516 CD180Q99467 661 aa16.75■□□□□ 0.27
LTBP3-210ENST00000528516 LYARQ9NX58 379 aaKnown RBP16.75■□□□□ 0.27
LTBP3-210ENST00000528516 PLCL2Q9UPR0 1127 aa16.75■□□□□ 0.27
LTBP3-210ENST00000528516 BPTFQ12830 3046 aa16.75■□□□□ 0.27
LTBP3-210ENST00000528516 KRBOX1C9JBD0 128 aa16.75■□□□□ 0.27
LTBP3-210ENST00000528516 GABRPO00591 440 aa16.75■□□□□ 0.27
LTBP3-210ENST00000528516 GPR171O14626 319 aa16.75■□□□□ 0.27
LTBP3-210ENST00000528516 CHST10O43529 356 aa16.75■□□□□ 0.27
LTBP3-210ENST00000528516 KAT7O95251 611 aa16.75■□□□□ 0.27
LTBP3-210ENST00000528516 LALBAP00709 142 aa16.75■□□□□ 0.27
LTBP3-210ENST00000528516 TFP02787 698 aa16.75■□□□□ 0.27
LTBP3-210ENST00000528516 GNSP15586 552 aa16.75■□□□□ 0.27
LTBP3-210ENST00000528516 SLC6A1P30531 599 aa16.75■□□□□ 0.27
LTBP3-210ENST00000528516 AHRP35869 848 aa16.75■□□□□ 0.27
LTBP3-210ENST00000528516 PRRT3Q5FWE3 981 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms