RNA–Protein interactions for RNA: ENST00000525284.5

LRRK1-202, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 1 (best)

Gene LRRK1, Length 6,494 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-202ENST00000525284 GRB7Q14451 532 aa12.94□□□□□ -0.34
LRRK1-202ENST00000525284 MSMO1Q15800 293 aa12.94□□□□□ -0.34
LRRK1-202ENST00000525284 PGAP1Q75T13 922 aa12.94□□□□□ -0.34
LRRK1-202ENST00000525284 PIWIL3Q7Z3Z3 882 aaKnown RBP12.94□□□□□ -0.34
LRRK1-202ENST00000525284 LRRC25Q8N386 305 aaPredicted RBP12.94□□□□□ -0.34
LRRK1-202ENST00000525284 NIPAL2Q9H841 368 aa12.94□□□□□ -0.34
LRRK1-202ENST00000525284 HRASLSQ9HDD0 168 aa12.94□□□□□ -0.34
LRRK1-202ENST00000525284 MTCH1Q9NZJ7 389 aa12.94□□□□□ -0.34
LRRK1-202ENST00000525284 EXO1Q9UQ84 846 aaKnown RBP12.94□□□□□ -0.34
LRRK1-202ENST00000525284 RIPK3Q9Y572 518 aa12.94□□□□□ -0.34
LRRK1-202ENST00000525284 PCDHGA1Q9Y5H4 931 aa12.94□□□□□ -0.34
LRRK1-202ENST00000525284 FEZF1A0PJY2 475 aa12.94□□□□□ -0.34
LRRK1-202ENST00000525284 SCGB1C2P0DMR2 95 aa12.94□□□□□ -0.34
LRRK1-202ENST00000525284 G0S2P27469 103 aa12.94□□□□□ -0.34
LRRK1-202ENST00000525284 GPR19Q15760 415 aa12.94□□□□□ -0.34
LRRK1-202ENST00000525284 STK11Q15831 433 aa12.94□□□□□ -0.34
LRRK1-202ENST00000525284 C6orf136Q5SQH8 315 aa12.94□□□□□ -0.34
LRRK1-202ENST00000525284 BPIFCQ8NFQ6 507 aa12.94□□□□□ -0.34
LRRK1-202ENST00000525284 OR6T1Q8NGN1 323 aa12.94□□□□□ -0.34
LRRK1-202ENST00000525284 COL1A2P08123 1366 aa12.94□□□□□ -0.34
LRRK1-202ENST00000525284 CRYM-AS1A6NIL9 109 aa12.94□□□□□ -0.34
LRRK1-202ENST00000525284 ANKRD66B4E2M5 251 aa12.94□□□□□ -0.34
LRRK1-202ENST00000525284 GPR25O00155 361 aa12.94□□□□□ -0.34
LRRK1-202ENST00000525284 FAM163BP0C2L3 166 aa12.94□□□□□ -0.34
LRRK1-202ENST00000525284 METTL15P1P0C7V9 234 aa12.94□□□□□ -0.34
LRRK1-202ENST00000525284 EDN3P14138 238 aa12.94□□□□□ -0.34
LRRK1-202ENST00000525284 ELNP15502 786 aa12.94□□□□□ -0.34
LRRK1-202ENST00000525284 NFYAP23511 347 aaPredicted RBP12.94□□□□□ -0.34
LRRK1-202ENST00000525284 GKP32189 559 aa12.94□□□□□ -0.34
LRRK1-202ENST00000525284 EIF2DP41214 584 aaKnown RBP12.94□□□□□ -0.34
LRRK1-202ENST00000525284 OR10K2Q6IF99 312 aa12.94□□□□□ -0.34
LRRK1-202ENST00000525284 METAP1DQ6UB28 335 aaPredicted RBP12.94□□□□□ -0.34
LRRK1-202ENST00000525284 B3GLCTQ6Y288 498 aa12.94□□□□□ -0.34
LRRK1-202ENST00000525284 OR6F1Q8NGZ6 308 aa12.94□□□□□ -0.34
LRRK1-202ENST00000525284 SLC7A13Q8TCU3 470 aa12.94□□□□□ -0.34
LRRK1-202ENST00000525284 C2CD4CQ8TF44 421 aa12.94□□□□□ -0.34
LRRK1-202ENST00000525284 C14orf79Q96F83 325 aa12.94□□□□□ -0.34
LRRK1-202ENST00000525284 ZNF599Q96NL3 588 aa12.94□□□□□ -0.34
LRRK1-202ENST00000525284 KATNB1Q9BVA0 655 aa12.94□□□□□ -0.34
LRRK1-202ENST00000525284 EDDM13A0A1B0GTR0 161 aa12.94□□□□□ -0.34
LRRK1-202ENST00000525284 SERTM2A0A1B0GWG4 89 aa12.94□□□□□ -0.34
LRRK1-202ENST00000525284 THBS1P07996 1170 aa12.94□□□□□ -0.34
LRRK1-202ENST00000525284 FOLR1P15328 257 aa12.94□□□□□ -0.34
LRRK1-202ENST00000525284 HTR1EP28566 365 aa12.94□□□□□ -0.34
LRRK1-202ENST00000525284 HMGN3Q15651 99 aa12.94□□□□□ -0.34
LRRK1-202ENST00000525284 APOBEC3HQ6NTF7 200 aaKnown RBP12.94□□□□□ -0.34
LRRK1-202ENST00000525284 ENDOVQ8N8Q3 282 aaKnown RBP12.94□□□□□ -0.34
LRRK1-202ENST00000525284 OR10K1Q8NGX5 313 aa12.94□□□□□ -0.34
LRRK1-202ENST00000525284 LILRB4Q8NHJ6 448 aa12.94□□□□□ -0.34
LRRK1-202ENST00000525284 STRADBQ9C0K7 418 aa12.94□□□□□ -0.34
LRRK1-202ENST00000525284 THSD1Q9NS62 852 aa12.94□□□□□ -0.34
LRRK1-202ENST00000525284 FAM212BQ9NTI7 297 aaPredicted RBP12.94□□□□□ -0.34
LRRK1-202ENST00000525284 BABAM2Q9NXR7 383 aa12.94□□□□□ -0.34
LRRK1-202ENST00000525284 B4DXG7 233 aa12.94□□□□□ -0.34
LRRK1-202ENST00000525284 ZNF207O43670 478 aaKnown RBP12.94□□□□□ -0.34
LRRK1-202ENST00000525284 SRPX2O60687 465 aaPredicted RBP12.94□□□□□ -0.34
LRRK1-202ENST00000525284 CT45A6P0DMU7 189 aa12.94□□□□□ -0.34
LRRK1-202ENST00000525284 CT45A5P0DMU8 189 aa12.94□□□□□ -0.34
LRRK1-202ENST00000525284 CT45A7P0DMV0 189 aa12.94□□□□□ -0.34
LRRK1-202ENST00000525284 CT45A8P0DMV1 189 aa12.94□□□□□ -0.34
LRRK1-202ENST00000525284 CT45A9P0DMV2 189 aa12.94□□□□□ -0.34
LRRK1-202ENST00000525284 JUPP14923 745 aa12.94□□□□□ -0.34
LRRK1-202ENST00000525284 EFNA3P52797 238 aa12.94□□□□□ -0.34
LRRK1-202ENST00000525284 FLI1Q01543 452 aaPredicted RBP12.94□□□□□ -0.34
LRRK1-202ENST00000525284 SCAPQ12770 1279 aa12.94□□□□□ -0.34
LRRK1-202ENST00000525284 KIAA0141Q14154 515 aaPredicted RBP12.94□□□□□ -0.34
LRRK1-202ENST00000525284 CT45A2Q5DJT8 189 aa12.94□□□□□ -0.34
LRRK1-202ENST00000525284 CT45A1Q5HYN5 189 aa12.94□□□□□ -0.34
LRRK1-202ENST00000525284 PLCXD3Q63HM9 321 aa12.94□□□□□ -0.34
LRRK1-202ENST00000525284 CT45A3Q8NHU0 189 aa12.94□□□□□ -0.34
LRRK1-202ENST00000525284 STT3BQ8TCJ2 826 aa12.94□□□□□ -0.34
LRRK1-202ENST00000525284 FRS2Q8WU20 508 aa12.94□□□□□ -0.34
LRRK1-202ENST00000525284 HIDE1A8MVS5 230 aa12.93□□□□□ -0.34
LRRK1-202ENST00000525284 MBP02144 154 aa12.93□□□□□ -0.34
LRRK1-202ENST00000525284 P04436 131 aa12.93□□□□□ -0.34
LRRK1-202ENST00000525284 CPN1P15169 458 aa12.93□□□□□ -0.34
LRRK1-202ENST00000525284 TNFRSF1BP20333 461 aa12.93□□□□□ -0.34
LRRK1-202ENST00000525284 PRSS48Q7RTY5 328 aa12.93□□□□□ -0.34
LRRK1-202ENST00000525284 CYB561A3Q8NBI2 242 aa12.93□□□□□ -0.34
LRRK1-202ENST00000525284 DAZLQ92904 295 aaKnown RBP12.93□□□□□ -0.34
LRRK1-202ENST00000525284 ARSGQ96EG1 525 aa12.93□□□□□ -0.34
LRRK1-202ENST00000525284 PRR11Q96HE9 360 aaPredicted RBP12.93□□□□□ -0.34
LRRK1-202ENST00000525284 TSSK2Q96PF2 358 aa12.93□□□□□ -0.34
LRRK1-202ENST00000525284 GPR22Q99680 433 aa12.93□□□□□ -0.34
LRRK1-202ENST00000525284 ARV1Q9H2C2 271 aa12.93□□□□□ -0.34
LRRK1-202ENST00000525284 ZDHHC7Q9NXF8 308 aa12.93□□□□□ -0.34
LRRK1-202ENST00000525284 MYOTQ9UBF9 498 aa12.93□□□□□ -0.34
LRRK1-202ENST00000525284 LIPT1Q9Y234 373 aa12.93□□□□□ -0.34
LRRK1-202ENST00000525284 PCDHAC2Q9Y5I4 1007 aa12.93□□□□□ -0.34
LRRK1-202ENST00000525284 CIDEAO60543 219 aa12.93□□□□□ -0.34
LRRK1-202ENST00000525284 GSRP00390 522 aa12.93□□□□□ -0.34
LRRK1-202ENST00000525284 PTAFRP25105 342 aa12.93□□□□□ -0.34
LRRK1-202ENST00000525284 TMEM31Q5JXX7 168 aa12.93□□□□□ -0.34
LRRK1-202ENST00000525284 C11orf42Q8N5U0 333 aa12.93□□□□□ -0.34
LRRK1-202ENST00000525284 CMTM2Q8TAZ6 248 aa12.93□□□□□ -0.34
LRRK1-202ENST00000525284 BRIX1Q8TDN6 353 aaKnown RBP12.93□□□□□ -0.34
LRRK1-202ENST00000525284 ZNF696Q9H7X3 374 aa12.93□□□□□ -0.34
LRRK1-202ENST00000525284 LIN7CQ9NUP9 197 aaKnown RBP12.93□□□□□ -0.34
LRRK1-202ENST00000525284 OR14J1Q9UGF5 321 aa12.93□□□□□ -0.34
LRRK1-202ENST00000525284 PTGDR2Q9Y5Y4 395 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms