RNA–Protein interactions for RNA: ENST00000525064.5

CLNS1A-202, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 3 BASIC

Gene CLNS1A, Length 1,121 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-202ENST00000525064 LAMP1P11279 417 aa10.59□□□□□ -0.71
CLNS1A-202ENST00000525064 TBXA2RP21731 343 aa10.59□□□□□ -0.71
CLNS1A-202ENST00000525064 KCNJ5P48544 419 aa10.59□□□□□ -0.71
CLNS1A-202ENST00000525064 PRIM2P49643 509 aa10.59□□□□□ -0.71
CLNS1A-202ENST00000525064 RPS3AP61247 264 aaKnown RBP10.59□□□□□ -0.71
CLNS1A-202ENST00000525064 VSNL1P62760 191 aa10.59□□□□□ -0.71
CLNS1A-202ENST00000525064 PTGR1Q14914 329 aa10.59□□□□□ -0.71
CLNS1A-202ENST00000525064 SGCBQ16585 318 aa10.59□□□□□ -0.71
CLNS1A-202ENST00000525064 EXOC3L2Q2M3D2 409 aa10.59□□□□□ -0.71
CLNS1A-202ENST00000525064 VPS26BQ4G0F5 336 aa10.59□□□□□ -0.71
CLNS1A-202ENST00000525064 GTPBP8Q8N3Z3 284 aaPredicted RBP10.59□□□□□ -0.71
CLNS1A-202ENST00000525064 COX18Q8N8Q8 333 aa10.59□□□□□ -0.71
CLNS1A-202ENST00000525064 OR10D3Q8NH80 312 aa10.59□□□□□ -0.71
CLNS1A-202ENST00000525064 JADE3Q92613 823 aa10.59□□□□□ -0.71
CLNS1A-202ENST00000525064 ZNF524Q96C55 264 aa10.59□□□□□ -0.71
CLNS1A-202ENST00000525064 MED18Q9BUE0 208 aa10.59□□□□□ -0.71
CLNS1A-202ENST00000525064 CXorf36Q9H7Y0 433 aa10.59□□□□□ -0.71
CLNS1A-202ENST00000525064 ZCCHC3Q9NUD5 404 aaKnown RBP10.59□□□□□ -0.71
CLNS1A-202ENST00000525064 METRNQ9UJH8 293 aa10.59□□□□□ -0.71
CLNS1A-202ENST00000525064 EDARQ9UNE0 448 aa10.59□□□□□ -0.71
CLNS1A-202ENST00000525064 PROCRQ9UNN8 238 aa10.59□□□□□ -0.71
CLNS1A-202ENST00000525064 TMED5Q9Y3A6 229 aa10.59□□□□□ -0.71
CLNS1A-202ENST00000525064 TRAF6Q9Y4K3 522 aa10.59□□□□□ -0.71
CLNS1A-202ENST00000525064 KCNE3Q9Y6H6 103 aa10.59□□□□□ -0.71
CLNS1A-202ENST00000525064 CHEK2O96017 543 aa10.58□□□□□ -0.72
CLNS1A-202ENST00000525064 HMGN2P05204 90 aaKnown RBP10.58□□□□□ -0.72
CLNS1A-202ENST00000525064 THBDP07204 575 aa10.58□□□□□ -0.72
CLNS1A-202ENST00000525064 FGF4P08620 206 aa10.58□□□□□ -0.72
CLNS1A-202ENST00000525064 ASMTP46597 345 aa10.58□□□□□ -0.72
CLNS1A-202ENST00000525064 PCYT1AP49585 367 aa10.58□□□□□ -0.72
CLNS1A-202ENST00000525064 POU6F2P78424 691 aaPredicted RBP10.58□□□□□ -0.72
CLNS1A-202ENST00000525064 ZNF117Q03924 483 aa10.58□□□□□ -0.72
CLNS1A-202ENST00000525064 FOXF1Q12946 379 aa10.58□□□□□ -0.72
CLNS1A-202ENST00000525064 MLC1Q15049 377 aa10.58□□□□□ -0.72
CLNS1A-202ENST00000525064 NDUFAF6Q330K2 333 aa10.58□□□□□ -0.72
CLNS1A-202ENST00000525064 KRTAP21-3Q3LHN1 58 aa10.58□□□□□ -0.72
CLNS1A-202ENST00000525064 DDX59Q5T1V6 619 aaKnown RBP eCLIP10.58□□□□□ -0.72
CLNS1A-202ENST00000525064 Q71RC1 249 aaPredicted RBP10.58□□□□□ -0.72
CLNS1A-202ENST00000525064 FAM214BQ7L5A3 538 aa10.58□□□□□ -0.72
CLNS1A-202ENST00000525064 KRTCAP2Q8N6L1 136 aa10.58□□□□□ -0.72
CLNS1A-202ENST00000525064 OR6Y1Q8NGX8 325 aa10.58□□□□□ -0.72
CLNS1A-202ENST00000525064 TCP10LQ8TDR4 215 aa10.58□□□□□ -0.72
CLNS1A-202ENST00000525064 MTERF3Q96E29 417 aa10.58□□□□□ -0.72
CLNS1A-202ENST00000525064 KLHL4Q9C0H6 718 aa10.58□□□□□ -0.72
CLNS1A-202ENST00000525064 IQCGQ9H095 443 aaKnown RBP10.58□□□□□ -0.72
CLNS1A-202ENST00000525064 UBTD1Q9HAC8 227 aa10.58□□□□□ -0.72
CLNS1A-202ENST00000525064 NEUROD4Q9HD90 331 aa10.58□□□□□ -0.72
CLNS1A-202ENST00000525064 BEX4Q9NWD9 120 aaPredicted RBP10.58□□□□□ -0.72
CLNS1A-202ENST00000525064 ELOVL5Q9NYP7 299 aa10.58□□□□□ -0.72
CLNS1A-202ENST00000525064 LGALS13Q9UHV8 139 aa10.58□□□□□ -0.72
CLNS1A-202ENST00000525064 ZDHHC2Q9UIJ5 367 aa10.58□□□□□ -0.72
CLNS1A-202ENST00000525064 USF3Q68DE3 2245 aa10.57□□□□□ -0.72
CLNS1A-202ENST00000525064 A0A087WZY1 265 aa10.57□□□□□ -0.72
CLNS1A-202ENST00000525064 A0A1W2PQD3 144 aa10.57□□□□□ -0.72
CLNS1A-202ENST00000525064 C7orf72A4D263 438 aa10.57□□□□□ -0.72
CLNS1A-202ENST00000525064 C16orf97H3BN30 126 aa10.57□□□□□ -0.72
CLNS1A-202ENST00000525064 EFNA2O43921 213 aa10.57□□□□□ -0.72
CLNS1A-202ENST00000525064 SS18L1O75177 396 aaPredicted RBP10.57□□□□□ -0.72
CLNS1A-202ENST00000525064 SLU7O95391 586 aaKnown RBP10.57□□□□□ -0.72
CLNS1A-202ENST00000525064 C6orf47O95873 294 aa10.57□□□□□ -0.72
CLNS1A-202ENST00000525064 NUDT17P0C025 328 aa10.57□□□□□ -0.72
CLNS1A-202ENST00000525064 LINGO3P0C6S8 592 aa10.57□□□□□ -0.72
CLNS1A-202ENST00000525064 FCGR2AP12318 317 aa10.57□□□□□ -0.72
CLNS1A-202ENST00000525064 NID1P14543 1247 aa10.57□□□□□ -0.72
CLNS1A-202ENST00000525064 HPCAL1P37235 193 aa10.57□□□□□ -0.72
CLNS1A-202ENST00000525064 ZNF41P51814 821 aaPredicted RBP10.57□□□□□ -0.72
CLNS1A-202ENST00000525064 NKX6-1P78426 367 aaPredicted RBP10.57□□□□□ -0.72
CLNS1A-202ENST00000525064 OCRLQ01968 901 aa10.57□□□□□ -0.72
CLNS1A-202ENST00000525064 TOMM34Q15785 309 aaPredicted RBP10.57□□□□□ -0.72
CLNS1A-202ENST00000525064 C6orf136Q5SQH8 315 aa10.57□□□□□ -0.72
CLNS1A-202ENST00000525064 CDC73Q6P1J9 531 aa10.57□□□□□ -0.72
CLNS1A-202ENST00000525064 CBLN3Q6UW01 205 aa10.57□□□□□ -0.72
CLNS1A-202ENST00000525064 LSRQ86X29 649 aaPredicted RBP10.57□□□□□ -0.72
CLNS1A-202ENST00000525064 RIBC1Q8N443 379 aaPredicted RBP10.57□□□□□ -0.72
CLNS1A-202ENST00000525064 OR6K3Q8NGY3 331 aa10.57□□□□□ -0.72
CLNS1A-202ENST00000525064 OR5AK3PQ8NH89 298 aa10.57□□□□□ -0.72
CLNS1A-202ENST00000525064 OR2V1Q8NHB1 315 aa10.57□□□□□ -0.72
CLNS1A-202ENST00000525064 B4GALNT2Q8NHY0 566 aa10.57□□□□□ -0.72
CLNS1A-202ENST00000525064 ROBO4Q8WZ75 1007 aa10.57□□□□□ -0.72
CLNS1A-202ENST00000525064 ZBTB8AQ96BR9 441 aa10.57□□□□□ -0.72
CLNS1A-202ENST00000525064 ARSGQ96EG1 525 aa10.57□□□□□ -0.72
CLNS1A-202ENST00000525064 CHMP6Q96FZ7 201 aa10.57□□□□□ -0.72
CLNS1A-202ENST00000525064 PPP3R2Q96LZ3 170 aa10.57□□□□□ -0.72
CLNS1A-202ENST00000525064 SLC39A3Q9BRY0 314 aa10.57□□□□□ -0.72
CLNS1A-202ENST00000525064 BTBD2Q9BX70 525 aa10.57□□□□□ -0.72
CLNS1A-202ENST00000525064 SRXN1Q9BYN0 137 aa10.57□□□□□ -0.72
CLNS1A-202ENST00000525064 PRRG4Q9BZD6 226 aa10.57□□□□□ -0.72
CLNS1A-202ENST00000525064 UBQLN4Q9NRR5 601 aa10.57□□□□□ -0.72
CLNS1A-202ENST00000525064 GPATCH2Q9NW75 528 aa10.57□□□□□ -0.72
CLNS1A-202ENST00000525064 SNX8Q9Y5X2 465 aa10.57□□□□□ -0.72
CLNS1A-202ENST00000525064 DNHD1Q96M86 4753 aa10.57□□□□□ -0.72
CLNS1A-202ENST00000525064 ANK3Q12955 4377 aaKnown RBP10.56□□□□□ -0.72
CLNS1A-202ENST00000525064 SCDO00767 359 aa10.56□□□□□ -0.72
CLNS1A-202ENST00000525064 LYPLA1O75608 230 aaPredicted RBP10.56□□□□□ -0.72
CLNS1A-202ENST00000525064 NTN1O95631 604 aa10.56□□□□□ -0.72
CLNS1A-202ENST00000525064 PLAUP00749 431 aa10.56□□□□□ -0.72
CLNS1A-202ENST00000525064 FOSL1P15407 271 aa10.56□□□□□ -0.72
CLNS1A-202ENST00000525064 SFTPDP35247 375 aa10.56□□□□□ -0.72
CLNS1A-202ENST00000525064 RAC1P63000 192 aa10.56□□□□□ -0.72
CLNS1A-202ENST00000525064 TP53BP2Q13625 1128 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms