RNA–Protein interactions for RNA: ENST00000524652.1

CSDE1-208, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-208ENST00000524652 CDH1P12830 882 aa2.73□□□□□ -1.97
CSDE1-208ENST00000524652 CCL4P13236 92 aa2.73□□□□□ -1.97
CSDE1-208ENST00000524652 SLC2A4P14672 509 aa2.73□□□□□ -1.97
CSDE1-208ENST00000524652 FOLR1P15328 257 aa2.73□□□□□ -1.97
CSDE1-208ENST00000524652 CD53P19397 219 aa2.73□□□□□ -1.97
CSDE1-208ENST00000524652 ITGAXP20702 1163 aa2.73□□□□□ -1.97
CSDE1-208ENST00000524652 EEF1DP29692 281 aaKnown RBP2.73□□□□□ -1.97
CSDE1-208ENST00000524652 OAS2P29728 719 aaKnown RBP2.73□□□□□ -1.97
CSDE1-208ENST00000524652 ALDH3A1P30838 453 aa2.73□□□□□ -1.97
CSDE1-208ENST00000524652 SHMT2P34897 504 aa2.73□□□□□ -1.97
CSDE1-208ENST00000524652 DUSP3P51452 185 aaPredicted RBP2.73□□□□□ -1.97
CSDE1-208ENST00000524652 FUT6P51993 359 aa2.73□□□□□ -1.97
CSDE1-208ENST00000524652 EFNA3P52797 238 aa2.73□□□□□ -1.97
CSDE1-208ENST00000524652 ATP12AP54707 1039 aa2.73□□□□□ -1.97
CSDE1-208ENST00000524652 CDH13P55290 713 aa2.73□□□□□ -1.97
CSDE1-208ENST00000524652 FOXA1P55317 472 aa2.73□□□□□ -1.97
CSDE1-208ENST00000524652 AP1S2P56377 157 aa2.73□□□□□ -1.97
CSDE1-208ENST00000524652 ERVK11-1P61568 191 aa2.73□□□□□ -1.97
CSDE1-208ENST00000524652 CSNK1G2P78368 415 aa2.73□□□□□ -1.97
CSDE1-208ENST00000524652 PRDX1Q06830 199 aaKnown RBP2.73□□□□□ -1.97
CSDE1-208ENST00000524652 SLC5A12Q1EHB4 618 aa2.73□□□□□ -1.97
CSDE1-208ENST00000524652 ISXQ2M1V0 245 aa2.73□□□□□ -1.97
CSDE1-208ENST00000524652 FAM83EQ2M2I3 478 aa2.73□□□□□ -1.97
CSDE1-208ENST00000524652 HKDC1Q2TB90 917 aa2.73□□□□□ -1.97
CSDE1-208ENST00000524652 UNC50Q53HI1 259 aa2.73□□□□□ -1.97
CSDE1-208ENST00000524652 TAF1BQ53T94 588 aaPredicted RBP2.73□□□□□ -1.97
CSDE1-208ENST00000524652 TCHHL1Q5QJ38 904 aaPredicted RBP2.73□□□□□ -1.97
CSDE1-208ENST00000524652 ZNF678Q5SXM1 525 aa2.73□□□□□ -1.97
CSDE1-208ENST00000524652 AGBL2Q5U5Z8 902 aa2.73□□□□□ -1.97
CSDE1-208ENST00000524652 SULT1C3Q6IMI6 304 aa2.73□□□□□ -1.97
CSDE1-208ENST00000524652 IRGCQ6NXR0 463 aa2.73□□□□□ -1.97
CSDE1-208ENST00000524652 JMJD6Q6NYC1 403 aaPredicted RBP2.73□□□□□ -1.97
CSDE1-208ENST00000524652 WDR74Q6RFH5 385 aaPredicted RBP2.73□□□□□ -1.97
CSDE1-208ENST00000524652 LCTLQ6UWM7 567 aa2.73□□□□□ -1.97
CSDE1-208ENST00000524652 ZYG11AQ6WRX3 759 aa2.73□□□□□ -1.97
CSDE1-208ENST00000524652 FRA10AC1Q70Z53 315 aa2.73□□□□□ -1.97
CSDE1-208ENST00000524652 TAOK1Q7L7X3 1001 aa2.73□□□□□ -1.97
CSDE1-208ENST00000524652 PRSS41Q7RTY9 318 aa2.73□□□□□ -1.97
CSDE1-208ENST00000524652 PRSS42Q7Z5A4 293 aa2.73□□□□□ -1.97
CSDE1-208ENST00000524652 VN1R4Q7Z5H5 301 aa2.73□□□□□ -1.97
CSDE1-208ENST00000524652 ADAMTSL2Q86TH1 951 aa2.73□□□□□ -1.97
CSDE1-208ENST00000524652 TBC1D26Q86UD7 250 aa2.73□□□□□ -1.97
CSDE1-208ENST00000524652 SATL1Q86VE3 508 aa2.73□□□□□ -1.97
CSDE1-208ENST00000524652 THOC6Q86W42 341 aaKnown RBP2.73□□□□□ -1.97
CSDE1-208ENST00000524652 PAQR7Q86WK9 346 aa2.73□□□□□ -1.97
CSDE1-208ENST00000524652 OOSP2Q86WS3 158 aa2.73□□□□□ -1.97
CSDE1-208ENST00000524652 FBXO39Q8N4B4 442 aa2.73□□□□□ -1.97
CSDE1-208ENST00000524652 PARP16Q8N5Y8 322 aa2.73□□□□□ -1.97
CSDE1-208ENST00000524652 ANKRD42Q8N9B4 389 aa2.73□□□□□ -1.97
CSDE1-208ENST00000524652 SLC38A9Q8NBW4 561 aa2.73□□□□□ -1.97
CSDE1-208ENST00000524652 OR2L3Q8NG85 312 aa2.73□□□□□ -1.97
CSDE1-208ENST00000524652 OR4K1Q8NGD4 311 aa2.73□□□□□ -1.97
CSDE1-208ENST00000524652 OR6C4Q8NGE1 309 aa2.73□□□□□ -1.97
CSDE1-208ENST00000524652 OR4D9Q8NGE8 314 aa2.73□□□□□ -1.97
CSDE1-208ENST00000524652 OR52B6Q8NGF0 335 aa2.73□□□□□ -1.97
CSDE1-208ENST00000524652 STAG3L4Q8TBR4 150 aa2.73□□□□□ -1.97
CSDE1-208ENST00000524652 MCOLN3Q8TDD5 553 aa2.73□□□□□ -1.97
CSDE1-208ENST00000524652 UBTD2Q8WUN7 234 aa2.73□□□□□ -1.97
CSDE1-208ENST00000524652 LCN9Q8WX39 176 aa2.73□□□□□ -1.97
CSDE1-208ENST00000524652 RAB40AQ8WXH6 277 aa2.73□□□□□ -1.97
CSDE1-208ENST00000524652 SMPDL3AQ92484 453 aa2.73□□□□□ -1.97
CSDE1-208ENST00000524652 NAT6Q93015 286 aa2.73□□□□□ -1.97
CSDE1-208ENST00000524652 NEIL2Q969S2 332 aa2.73□□□□□ -1.97
CSDE1-208ENST00000524652 ERGIC1Q969X5 290 aa2.73□□□□□ -1.97
CSDE1-208ENST00000524652 L3HYPDHQ96EM0 354 aa2.73□□□□□ -1.97
CSDE1-208ENST00000524652 MED8Q96G25 268 aa2.73□□□□□ -1.97
CSDE1-208ENST00000524652 SLC41A2Q96JW4 573 aa2.73□□□□□ -1.97
CSDE1-208ENST00000524652 CABS1Q96KC9 395 aa2.73□□□□□ -1.97
CSDE1-208ENST00000524652 ATP6V1G3Q96LB4 118 aa2.73□□□□□ -1.97
CSDE1-208ENST00000524652 FOPNLQ96NB1 174 aa2.73□□□□□ -1.97
CSDE1-208ENST00000524652 PRAP1Q96NZ9 151 aa2.73□□□□□ -1.97
CSDE1-208ENST00000524652 KCNA7Q96RP8 456 aa2.73□□□□□ -1.97
CSDE1-208ENST00000524652 SORT1Q99523 831 aa2.73□□□□□ -1.97
CSDE1-208ENST00000524652 CTRCQ99895 268 aa2.73□□□□□ -1.97
CSDE1-208ENST00000524652 EGFL8Q99944 293 aa2.73□□□□□ -1.97
CSDE1-208ENST00000524652 MRPL57Q9BQC6 102 aaKnown RBP2.73□□□□□ -1.97
CSDE1-208ENST00000524652 CENPHQ9H3R5 247 aa2.73□□□□□ -1.97
CSDE1-208ENST00000524652 SRMSQ9H3Y6 488 aa2.73□□□□□ -1.97
CSDE1-208ENST00000524652 SYNDIG1Q9H7V2 258 aa2.73□□□□□ -1.97
CSDE1-208ENST00000524652 AKIRIN1Q9H9L7 192 aaPredicted RBP2.73□□□□□ -1.97
CSDE1-208ENST00000524652 PPCSQ9HAB8 311 aa2.73□□□□□ -1.97
CSDE1-208ENST00000524652 CCDC177Q9NQR7 707 aaPredicted RBP2.73□□□□□ -1.97
CSDE1-208ENST00000524652 FARSBQ9NSD9 589 aaKnown RBP2.73□□□□□ -1.97
CSDE1-208ENST00000524652 STARD5Q9NSY2 213 aa2.73□□□□□ -1.97
CSDE1-208ENST00000524652 ARGLU1Q9NWB6 273 aaPredicted RBP2.73□□□□□ -1.97
CSDE1-208ENST00000524652 NUDT4Q9NZJ9 180 aa2.73□□□□□ -1.97
CSDE1-208ENST00000524652 OR6C2Q9NZP2 312 aa2.73□□□□□ -1.97
CSDE1-208ENST00000524652 CD274Q9NZQ7 290 aa2.73□□□□□ -1.97
CSDE1-208ENST00000524652 COPG2Q9UBF2 871 aa2.73□□□□□ -1.97
CSDE1-208ENST00000524652 EPHA6Q9UF33 1036 aa2.73□□□□□ -1.97
CSDE1-208ENST00000524652 POLG2Q9UHN1 485 aa2.73□□□□□ -1.97
CSDE1-208ENST00000524652 PILRAQ9UKJ1 303 aa2.73□□□□□ -1.97
CSDE1-208ENST00000524652 ZNF490Q9ULM2 529 aaPredicted RBP2.73□□□□□ -1.97
CSDE1-208ENST00000524652 BTRCQ9Y297 605 aa2.73□□□□□ -1.97
CSDE1-208ENST00000524652 MRPS2Q9Y399 296 aaKnown RBP2.73□□□□□ -1.97
CSDE1-208ENST00000524652 RNF11Q9Y3C5 154 aa2.73□□□□□ -1.97
CSDE1-208ENST00000524652 TMEM184BQ9Y519 407 aaPredicted RBP2.73□□□□□ -1.97
CSDE1-208ENST00000524652 PCDHGB5Q9Y5G0 923 aa2.73□□□□□ -1.97
CSDE1-208ENST00000524652 PCDHGA1Q9Y5H4 931 aa2.73□□□□□ -1.97
CSDE1-208ENST00000524652 HEBP2Q9Y5Z4 205 aa2.73□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms