RNA–Protein interactions for RNA: ENST00000523896.1

PCM1-220, Transcript of pericentriolar material 1, humanhuman

TSL 2

Gene PCM1, Length 740 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-220ENST00000523896 BPIFB2Q8N4F0 458 aa2.82□□□□□ -1.96
PCM1-220ENST00000523896 STKLD1Q8NE28 680 aa2.82□□□□□ -1.96
PCM1-220ENST00000523896 CCDC26Q8TAB7 109 aa2.82□□□□□ -1.96
PCM1-220ENST00000523896 CCDC110Q8TBZ0 833 aa2.82□□□□□ -1.96
PCM1-220ENST00000523896 ADAMTS16Q8TE57 1224 aa2.82□□□□□ -1.96
PCM1-220ENST00000523896 HPDLQ96IR7 371 aa2.82□□□□□ -1.96
PCM1-220ENST00000523896 SLC30A2Q9BRI3 323 aa2.82□□□□□ -1.96
PCM1-220ENST00000523896 DPH7Q9BTV6 452 aa2.82□□□□□ -1.96
PCM1-220ENST00000523896 MRPL13Q9BYD1 178 aaKnown RBP2.82□□□□□ -1.96
PCM1-220ENST00000523896 DEFB126Q9BYW3 111 aa2.82□□□□□ -1.96
PCM1-220ENST00000523896 SLC25A51Q9H1U9 297 aa2.82□□□□□ -1.96
PCM1-220ENST00000523896 MIEF1Q9NQG6 463 aa2.82□□□□□ -1.96
PCM1-220ENST00000523896 Q9UF83 564 aa2.82□□□□□ -1.96
PCM1-220ENST00000523896 CYTH4Q9UIA0 394 aa2.82□□□□□ -1.96
PCM1-220ENST00000523896 B9D1Q9UPM9 204 aa2.82□□□□□ -1.96
PCM1-220ENST00000523896 AURKCQ9UQB9 309 aa2.82□□□□□ -1.96
PCM1-220ENST00000523896 VSIG4Q9Y279 399 aa2.82□□□□□ -1.96
PCM1-220ENST00000523896 GMPPBQ9Y5P6 360 aa2.82□□□□□ -1.96
PCM1-220ENST00000523896 ATP8B3O60423 1300 aa2.82□□□□□ -1.96
PCM1-220ENST00000523896 USP6P35125 1406 aa2.82□□□□□ -1.96
PCM1-220ENST00000523896 WRNQ14191 1432 aaPredicted RBP eCLIP2.82□□□□□ -1.96
PCM1-220ENST00000523896 MED14O60244 1454 aa2.82□□□□□ -1.96
PCM1-220ENST00000523896 AGLP35573 1532 aa2.82□□□□□ -1.96
PCM1-220ENST00000523896 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP2.82□□□□□ -1.96
PCM1-220ENST00000523896 CLTCQ00610 1675 aaKnown RBP2.82□□□□□ -1.96
PCM1-220ENST00000523896 RGPD1P0DJD0 1748 aa2.82□□□□□ -1.96
PCM1-220ENST00000523896 A0A0C4DFX4 3053 aa2.82□□□□□ -1.96
PCM1-220ENST00000523896 FRG2CA6NGY1 282 aa2.81□□□□□ -1.96
PCM1-220ENST00000523896 ZSCAN5BA6NJL1 495 aa2.81□□□□□ -1.96
PCM1-220ENST00000523896 CASKO14936 926 aa2.81□□□□□ -1.96
PCM1-220ENST00000523896 OR4F21O95013 312 aa2.81□□□□□ -1.96
PCM1-220ENST00000523896 CHRNA1P02708 482 aa2.81□□□□□ -1.96
PCM1-220ENST00000523896 KRT6BP04259 564 aa2.81□□□□□ -1.96
PCM1-220ENST00000523896 ANXA3P12429 323 aa2.81□□□□□ -1.96
PCM1-220ENST00000523896 CYP2F1P24903 491 aa2.81□□□□□ -1.96
PCM1-220ENST00000523896 RPL4P36578 427 aaKnown RBP2.81□□□□□ -1.96
PCM1-220ENST00000523896 KRT6CP48668 564 aa2.81□□□□□ -1.96
PCM1-220ENST00000523896 RND3P61587 244 aa2.81□□□□□ -1.96
PCM1-220ENST00000523896 PRKCEQ02156 737 aa2.81□□□□□ -1.96
PCM1-220ENST00000523896 ASAH1Q13510 395 aa2.81□□□□□ -1.96
PCM1-220ENST00000523896 SERTAD2Q14140 314 aa2.81□□□□□ -1.96
PCM1-220ENST00000523896 ZNF57Q68EA5 555 aaPredicted RBP2.81□□□□□ -1.96
PCM1-220ENST00000523896 UFSP1Q6NVU6 142 aa2.81□□□□□ -1.96
PCM1-220ENST00000523896 KRTAP5-2Q701N4 177 aa2.81□□□□□ -1.96
PCM1-220ENST00000523896 ERASQ7Z444 233 aa2.81□□□□□ -1.96
PCM1-220ENST00000523896 ZBED8Q8IZ13 594 aa2.81□□□□□ -1.96
PCM1-220ENST00000523896 MCOLN2Q8IZK6 566 aa2.81□□□□□ -1.96
PCM1-220ENST00000523896 UBE2Q2Q8WVN8 375 aa2.81□□□□□ -1.96
PCM1-220ENST00000523896 TAF4BQ92750 862 aa2.81□□□□□ -1.96
PCM1-220ENST00000523896 TMEM80Q96HE8 168 aa2.81□□□□□ -1.96
PCM1-220ENST00000523896 SERAC1Q96JX3 654 aa2.81□□□□□ -1.96
PCM1-220ENST00000523896 CASD1Q96PB1 797 aa2.81□□□□□ -1.96
PCM1-220ENST00000523896 GPA33Q99795 319 aa2.81□□□□□ -1.96
PCM1-220ENST00000523896 TMEM121Q9BTD3 319 aa2.81□□□□□ -1.96
PCM1-220ENST00000523896 NFKBIZQ9BYH8 718 aa2.81□□□□□ -1.96
PCM1-220ENST00000523896 KRTAP4-3Q9BYR4 195 aa2.81□□□□□ -1.96
PCM1-220ENST00000523896 RWDD1Q9H446 243 aaPredicted RBP2.81□□□□□ -1.96
PCM1-220ENST00000523896 ATRNO75882 1429 aa2.81□□□□□ -1.96
PCM1-220ENST00000523896 SCAPERQ9BY12 1400 aa2.81□□□□□ -1.96
PCM1-220ENST00000523896 ARHGAP23Q9P227 1491 aa2.81□□□□□ -1.96
PCM1-220ENST00000523896 IQGAP2Q13576 1575 aa2.81□□□□□ -1.96
PCM1-220ENST00000523896 SPHKAPQ2M3C7 1700 aa2.81□□□□□ -1.96
PCM1-220ENST00000523896 FAM135AQ9P2D6 1515 aa2.8□□□□□ -1.96
PCM1-220ENST00000523896 SDHDO14521 159 aa2.8□□□□□ -1.96
PCM1-220ENST00000523896 CDX4O14627 284 aaPredicted RBP2.8□□□□□ -1.96
PCM1-220ENST00000523896 TRIM3O75382 744 aaPredicted RBP2.8□□□□□ -1.96
PCM1-220ENST00000523896 STX11O75558 287 aa2.8□□□□□ -1.96
PCM1-220ENST00000523896 ANP32DO95626 131 aa2.8□□□□□ -1.96
PCM1-220ENST00000523896 AK1P00568 194 aa2.8□□□□□ -1.96
PCM1-220ENST00000523896 CD55P08174 381 aa2.8□□□□□ -1.96
PCM1-220ENST00000523896 XRCC1P18887 633 aaPredicted RBP2.8□□□□□ -1.96
PCM1-220ENST00000523896 TNNI3P19429 210 aa2.8□□□□□ -1.96
PCM1-220ENST00000523896 PTBP1P26599 531 aaKnown RBP eCLIP2.8□□□□□ -1.96
PCM1-220ENST00000523896 CDH5P33151 784 aaPredicted RBP2.8□□□□□ -1.96
PCM1-220ENST00000523896 TRPC1P48995 793 aa2.8□□□□□ -1.96
PCM1-220ENST00000523896 DPYSL3Q14195 570 aa2.8□□□□□ -1.96
PCM1-220ENST00000523896 TRIP10Q15642 601 aa2.8□□□□□ -1.96
PCM1-220ENST00000523896 LINC01620Q4KN68 170 aa2.8□□□□□ -1.96
PCM1-220ENST00000523896 TEX44Q53QW1 395 aa2.8□□□□□ -1.96
PCM1-220ENST00000523896 PRR30Q53SZ7 412 aaPredicted RBP2.8□□□□□ -1.96
PCM1-220ENST00000523896 TMEM41BQ5BJD5 291 aa2.8□□□□□ -1.96
PCM1-220ENST00000523896 PVRIGQ6DKI7 326 aa2.8□□□□□ -1.96
PCM1-220ENST00000523896 CBLN3Q6UW01 205 aa2.8□□□□□ -1.96
PCM1-220ENST00000523896 CENPUQ71F23 418 aa2.8□□□□□ -1.96
PCM1-220ENST00000523896 ANKRD37Q7Z713 158 aa2.8□□□□□ -1.96
PCM1-220ENST00000523896 OR13F1Q8NGS4 319 aa2.8□□□□□ -1.96
PCM1-220ENST00000523896 C18orf25Q96B23 403 aaPredicted RBP2.8□□□□□ -1.96
PCM1-220ENST00000523896 FAF2Q96CS3 445 aa2.8□□□□□ -1.96
PCM1-220ENST00000523896 DHTKD1Q96HY7 919 aaPredicted RBP2.8□□□□□ -1.96
PCM1-220ENST00000523896 VSIG2Q96IQ7 327 aa2.8□□□□□ -1.96
PCM1-220ENST00000523896 C19orf24Q9BVV8 132 aa2.8□□□□□ -1.96
PCM1-220ENST00000523896 GLT8D2Q9H1C3 349 aa2.8□□□□□ -1.96
PCM1-220ENST00000523896 WDR76Q9H967 626 aa2.8□□□□□ -1.96
PCM1-220ENST00000523896 COG4Q9H9E3 785 aa2.8□□□□□ -1.96
PCM1-220ENST00000523896 ZNF275Q9NSD4 429 aaPredicted RBP2.8□□□□□ -1.96
PCM1-220ENST00000523896 RBM28Q9NW13 759 aaKnown RBP2.8□□□□□ -1.96
PCM1-220ENST00000523896 VNN3Q9NY84 501 aa2.8□□□□□ -1.96
PCM1-220ENST00000523896 RDH8Q9NYR8 311 aa2.8□□□□□ -1.96
PCM1-220ENST00000523896 CRLS1Q9UJA2 301 aa2.8□□□□□ -1.96
PCM1-220ENST00000523896 AHDC1Q5TGY3 1603 aaPredicted RBP2.79□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms