RNA–Protein interactions for RNA: ENST00000522987.1

MRPS28-209, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 3

Gene MRPS28, Length 487 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-209ENST00000522987 MFSD12Q6NUT3 480 aa13.79□□□□□ -0.2
MRPS28-209ENST00000522987 IKBIPQ70UQ0 350 aa13.79□□□□□ -0.2
MRPS28-209ENST00000522987 C4orf33Q8N1A6 199 aa13.79□□□□□ -0.2
MRPS28-209ENST00000522987 OR2V1Q8NHB1 315 aa13.79□□□□□ -0.2
MRPS28-209ENST00000522987 FAM76AQ8TAV0 307 aa13.79□□□□□ -0.2
MRPS28-209ENST00000522987 RAB3IL1Q8TBN0 382 aa13.79□□□□□ -0.2
MRPS28-209ENST00000522987 TMEM171Q8WVE6 324 aa13.79□□□□□ -0.2
MRPS28-209ENST00000522987 GIMAP5Q96F15 307 aa13.79□□□□□ -0.2
MRPS28-209ENST00000522987 GMPPAQ96IJ6 420 aaPredicted RBP13.79□□□□□ -0.2
MRPS28-209ENST00000522987 ADGRG7Q96K78 797 aa13.79□□□□□ -0.2
MRPS28-209ENST00000522987 MDFIQ99750 246 aa13.79□□□□□ -0.2
MRPS28-209ENST00000522987 REEP4Q9H6H4 257 aa13.79□□□□□ -0.2
MRPS28-209ENST00000522987 PLSCR4Q9NRQ2 329 aa13.79□□□□□ -0.2
MRPS28-209ENST00000522987 CADP27708 2225 aa13.79□□□□□ -0.2
MRPS28-209ENST00000522987 HIVEP2P31629 2446 aa13.79□□□□□ -0.2
MRPS28-209ENST00000522987 FAM171A2A8MVW0 826 aa13.78□□□□□ -0.2
MRPS28-209ENST00000522987 ALG1L2C9J202 215 aa13.78□□□□□ -0.2
MRPS28-209ENST00000522987 SS18L1O75177 396 aaPredicted RBP13.78□□□□□ -0.2
MRPS28-209ENST00000522987 HPGDP15428 266 aa13.78□□□□□ -0.2
MRPS28-209ENST00000522987 ZNF17P17021 662 aa13.78□□□□□ -0.2
MRPS28-209ENST00000522987 MAP3K8P41279 467 aa13.78□□□□□ -0.2
MRPS28-209ENST00000522987 ZNF844Q08AG5 666 aa13.78□□□□□ -0.2
MRPS28-209ENST00000522987 FOXF1Q12946 379 aa13.78□□□□□ -0.2
MRPS28-209ENST00000522987 VPS26BQ4G0F5 336 aa13.78□□□□□ -0.2
MRPS28-209ENST00000522987 RFTN2Q52LD8 501 aaPredicted RBP13.78□□□□□ -0.2
MRPS28-209ENST00000522987 Q6ZSR9 355 aa13.78□□□□□ -0.2
MRPS28-209ENST00000522987 ATG4DQ86TL0 474 aaPredicted RBP13.78□□□□□ -0.2
MRPS28-209ENST00000522987 C10orf107Q8IVU9 208 aa13.78□□□□□ -0.2
MRPS28-209ENST00000522987 GTPBP8Q8N3Z3 284 aaPredicted RBP13.78□□□□□ -0.2
MRPS28-209ENST00000522987 COX18Q8N8Q8 333 aa13.78□□□□□ -0.2
MRPS28-209ENST00000522987 CDRT4Q8N9R6 151 aa13.78□□□□□ -0.2
MRPS28-209ENST00000522987 ZFP28Q8NHY6 868 aa13.78□□□□□ -0.2
MRPS28-209ENST00000522987 AGR3Q8TD06 166 aa13.78□□□□□ -0.2
MRPS28-209ENST00000522987 EPS8L3Q8TE67 593 aaKnown RBP13.78□□□□□ -0.2
MRPS28-209ENST00000522987 ABHD3Q8WU67 409 aa13.78□□□□□ -0.2
MRPS28-209ENST00000522987 OSTF1Q92882 214 aa13.78□□□□□ -0.2
MRPS28-209ENST00000522987 CDS1Q92903 461 aa13.78□□□□□ -0.2
MRPS28-209ENST00000522987 MS4A4EQ96PG1 132 aa13.78□□□□□ -0.2
MRPS28-209ENST00000522987 TXLNGYQ9BZA5 131 aa13.78□□□□□ -0.2
MRPS28-209ENST00000522987 TUBB1Q9H4B7 451 aa13.78□□□□□ -0.2
MRPS28-209ENST00000522987 STOML1Q9UBI4 398 aa13.78□□□□□ -0.2
MRPS28-209ENST00000522987 SLC28A1O00337 649 aa13.77□□□□□ -0.21
MRPS28-209ENST00000522987 SCDO00767 359 aa13.77□□□□□ -0.21
MRPS28-209ENST00000522987 AZIN1O14977 448 aa13.77□□□□□ -0.21
MRPS28-209ENST00000522987 CLOCKO15516 846 aa13.77□□□□□ -0.21
MRPS28-209ENST00000522987 RGS14O43566 566 aa13.77□□□□□ -0.21
MRPS28-209ENST00000522987 NUDT14O95848 222 aa13.77□□□□□ -0.21
MRPS28-209ENST00000522987 ALOX5P09917 674 aa13.77□□□□□ -0.21
MRPS28-209ENST00000522987 ME2P23368 584 aa13.77□□□□□ -0.21
MRPS28-209ENST00000522987 PSMA4P25789 261 aaKnown RBP13.77□□□□□ -0.21
MRPS28-209ENST00000522987 AGTR1P30556 359 aa13.77□□□□□ -0.21
MRPS28-209ENST00000522987 PCYT1AP49585 367 aa13.77□□□□□ -0.21
MRPS28-209ENST00000522987 ATP5J2P56134 94 aa13.77□□□□□ -0.21
MRPS28-209ENST00000522987 DNAJB13P59910 316 aa13.77□□□□□ -0.21
MRPS28-209ENST00000522987 RAC1P63000 192 aa13.77□□□□□ -0.21
MRPS28-209ENST00000522987 LASP1Q14847 261 aaKnown RBP13.77□□□□□ -0.21
MRPS28-209ENST00000522987 CPTPQ5TA50 214 aa13.77□□□□□ -0.21
MRPS28-209ENST00000522987 PRSS57Q6UWY2 283 aa13.77□□□□□ -0.21
MRPS28-209ENST00000522987 SH2D5Q6ZV89 423 aa13.77□□□□□ -0.21
MRPS28-209ENST00000522987 NUFIP2Q7Z417 695 aaKnown RBP13.77□□□□□ -0.21
MRPS28-209ENST00000522987 LSRQ86X29 649 aaPredicted RBP13.77□□□□□ -0.21
MRPS28-209ENST00000522987 DDIASQ8IXT1 998 aa13.77□□□□□ -0.21
MRPS28-209ENST00000522987 LILRA2Q8N149 483 aa13.77□□□□□ -0.21
MRPS28-209ENST00000522987 CEP70Q8NHQ1 597 aa13.77□□□□□ -0.21
MRPS28-209ENST00000522987 B4GALNT2Q8NHY0 566 aa13.77□□□□□ -0.21
MRPS28-209ENST00000522987 RFWD2Q8NHY2 731 aa13.77□□□□□ -0.21
MRPS28-209ENST00000522987 PHOSPHO1Q8TCT1 267 aa13.77□□□□□ -0.21
MRPS28-209ENST00000522987 UBLCP1Q8WVY7 318 aaPredicted RBP13.77□□□□□ -0.21
MRPS28-209ENST00000522987 AKAP1Q92667 903 aaKnown RBP eCLIP13.77□□□□□ -0.21
MRPS28-209ENST00000522987 NEUROG1Q92886 237 aa13.77□□□□□ -0.21
MRPS28-209ENST00000522987 CAVIN3Q969G5 261 aa13.77□□□□□ -0.21
MRPS28-209ENST00000522987 ZBED6CLQ96FA7 236 aaPredicted RBP13.77□□□□□ -0.21
MRPS28-209ENST00000522987 CCT7Q99832 543 aa13.77□□□□□ -0.21
MRPS28-209ENST00000522987 GATA5Q9BWX5 397 aaPredicted RBP13.77□□□□□ -0.21
MRPS28-209ENST00000522987 SRXN1Q9BYN0 137 aa13.77□□□□□ -0.21
MRPS28-209ENST00000522987 GSX2Q9BZM3 304 aa13.77□□□□□ -0.21
MRPS28-209ENST00000522987 ZCCHC3Q9NUD5 404 aaKnown RBP13.77□□□□□ -0.21
MRPS28-209ENST00000522987 OXSMQ9NWU1 459 aa13.77□□□□□ -0.21
MRPS28-209ENST00000522987 LAMP3Q9UQV4 416 aa13.77□□□□□ -0.21
MRPS28-209ENST00000522987 SNX8Q9Y5X2 465 aa13.77□□□□□ -0.21
MRPS28-209ENST00000522987 A0A087WZY1 265 aa13.76□□□□□ -0.21
MRPS28-209ENST00000522987 IGHV3-15A0A0B4J1V0 119 aa13.76□□□□□ -0.21
MRPS28-209ENST00000522987 TTC36A6NLP5 189 aa13.76□□□□□ -0.21
MRPS28-209ENST00000522987 COPEO14579 308 aa13.76□□□□□ -0.21
MRPS28-209ENST00000522987 HS3ST1O14792 307 aa13.76□□□□□ -0.21
MRPS28-209ENST00000522987 TUBBP07437 444 aa13.76□□□□□ -0.21
MRPS28-209ENST00000522987 CHRNGP07510 517 aa13.76□□□□□ -0.21
MRPS28-209ENST00000522987 CARD18P57730 90 aa13.76□□□□□ -0.21
MRPS28-209ENST00000522987 POU6F2P78424 691 aaPredicted RBP13.76□□□□□ -0.21
MRPS28-209ENST00000522987 PPP2R2BQ00005 443 aa13.76□□□□□ -0.21
MRPS28-209ENST00000522987 ZNF117Q03924 483 aa13.76□□□□□ -0.21
MRPS28-209ENST00000522987 PCLAFQ15004 111 aa13.76□□□□□ -0.21
MRPS28-209ENST00000522987 CCDC153Q494R4 210 aa13.76□□□□□ -0.21
MRPS28-209ENST00000522987 LIPMQ5VYY2 423 aa13.76□□□□□ -0.21
MRPS28-209ENST00000522987 LRIG3Q6UXM1 1119 aa13.76□□□□□ -0.21
MRPS28-209ENST00000522987 BEND4Q6ZU67 534 aa13.76□□□□□ -0.21
MRPS28-209ENST00000522987 ESPNLQ6ZVH7 1005 aa13.76□□□□□ -0.21
MRPS28-209ENST00000522987 ZC3HAV1Q7Z2W4 902 aaKnown RBP13.76□□□□□ -0.21
MRPS28-209ENST00000522987 STK32CQ86UX6 486 aa13.76□□□□□ -0.21
MRPS28-209ENST00000522987 ZNF614Q8N883 585 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms