RNA–Protein interactions for RNA: ENST00000522122.1

SYNPO-205, Transcript of synaptopodin, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SYNPO, Length 5,098 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO-205ENST00000522122 ACSS1Q9NUB1 689 aaPredicted RBP12.99□□□□□ -0.33
SYNPO-205ENST00000522122 POU2F3Q9UKI9 436 aa12.99□□□□□ -0.33
SYNPO-205ENST00000522122 M0R036 132 aa12.99□□□□□ -0.33
SYNPO-205ENST00000522122 POLR1CO15160 346 aaPredicted RBP12.99□□□□□ -0.33
SYNPO-205ENST00000522122 ERCC1P07992 297 aaPredicted RBP12.99□□□□□ -0.33
SYNPO-205ENST00000522122 PET100P0DJ07 73 aa12.99□□□□□ -0.33
SYNPO-205ENST00000522122 CR2P20023 1033 aa12.99□□□□□ -0.33
SYNPO-205ENST00000522122 GDI2P50395 445 aaKnown RBP12.99□□□□□ -0.33
SYNPO-205ENST00000522122 HERV-K104P61576 105 aa12.99□□□□□ -0.33
SYNPO-205ENST00000522122 COL28A1Q2UY09 1125 aa12.99□□□□□ -0.33
SYNPO-205ENST00000522122 PLEKHN1Q494U1 663 aaPredicted RBP12.99□□□□□ -0.33
SYNPO-205ENST00000522122 TP53I3Q53FA7 332 aa12.99□□□□□ -0.33
SYNPO-205ENST00000522122 GARNL3Q5VVW2 1013 aa12.99□□□□□ -0.33
SYNPO-205ENST00000522122 ANKRD34AQ69YU3 496 aa12.99□□□□□ -0.33
SYNPO-205ENST00000522122 GAL3ST3Q96A11 431 aa12.99□□□□□ -0.33
SYNPO-205ENST00000522122 PKMYT1Q99640 499 aa12.99□□□□□ -0.33
SYNPO-205ENST00000522122 KCNIP3Q9Y2W7 256 aa12.99□□□□□ -0.33
SYNPO-205ENST00000522122 ARHGAP33O14559 1287 aa12.98□□□□□ -0.33
SYNPO-205ENST00000522122 PLGP00747 810 aaPredicted RBP12.98□□□□□ -0.33
SYNPO-205ENST00000522122 SCG5P05408 212 aa12.98□□□□□ -0.33
SYNPO-205ENST00000522122 HIST1H1TP22492 207 aaPredicted RBP12.98□□□□□ -0.33
SYNPO-205ENST00000522122 CST5P28325 142 aaPredicted RBP12.98□□□□□ -0.33
SYNPO-205ENST00000522122 HOXC5Q00444 222 aa12.98□□□□□ -0.33
SYNPO-205ENST00000522122 TEKQ02763 1124 aa12.98□□□□□ -0.33
SYNPO-205ENST00000522122 LEXMQ3ZCV2 418 aa12.98□□□□□ -0.33
SYNPO-205ENST00000522122 CCSAPQ6IQ19 270 aaPredicted RBP12.98□□□□□ -0.33
SYNPO-205ENST00000522122 C1orf94Q6P1W5 598 aa12.98□□□□□ -0.33
SYNPO-205ENST00000522122 MAMDC2Q7Z304 686 aaPredicted RBP12.98□□□□□ -0.33
SYNPO-205ENST00000522122 ZNF619Q8N2I2 560 aa12.98□□□□□ -0.33
SYNPO-205ENST00000522122 NAXEQ8NCW5 288 aa12.98□□□□□ -0.33
SYNPO-205ENST00000522122 OR5AK2Q8NH90 309 aa12.98□□□□□ -0.33
SYNPO-205ENST00000522122 TREX2Q9BQ50 279 aaPredicted RBP12.98□□□□□ -0.33
SYNPO-205ENST00000522122 HOXD1Q9GZZ0 328 aa12.98□□□□□ -0.33
SYNPO-205ENST00000522122 IKZF5Q9H5V7 419 aa12.98□□□□□ -0.33
SYNPO-205ENST00000522122 COL11A1P12107 1806 aaPredicted RBP12.98□□□□□ -0.33
SYNPO-205ENST00000522122 PTGER1P34995 402 aa12.98□□□□□ -0.33
SYNPO-205ENST00000522122 ACTBP60709 375 aa12.98□□□□□ -0.33
SYNPO-205ENST00000522122 ACTG1P63261 375 aa12.98□□□□□ -0.33
SYNPO-205ENST00000522122 CCDC58Q4VC31 144 aa12.98□□□□□ -0.33
SYNPO-205ENST00000522122 FAM26DQ5JW98 314 aa12.98□□□□□ -0.33
SYNPO-205ENST00000522122 ZER1Q7Z7L7 766 aa12.98□□□□□ -0.33
SYNPO-205ENST00000522122 MACROD1Q9BQ69 325 aa12.98□□□□□ -0.33
SYNPO-205ENST00000522122 GPR174Q9BXC1 333 aa12.98□□□□□ -0.33
SYNPO-205ENST00000522122 SLC39A1Q9NY26 324 aa12.98□□□□□ -0.33
SYNPO-205ENST00000522122 HS3ST2Q9Y278 367 aa12.98□□□□□ -0.33
SYNPO-205ENST00000522122 AK6Q9Y3D8 172 aaKnown RBP12.98□□□□□ -0.33
SYNPO-205ENST00000522122 RORAP35398 523 aa12.98□□□□□ -0.33
SYNPO-205ENST00000522122 CASRP41180 1078 aa12.98□□□□□ -0.33
SYNPO-205ENST00000522122 CDK3Q00526 305 aa12.98□□□□□ -0.33
SYNPO-205ENST00000522122 HHEXQ03014 270 aa12.98□□□□□ -0.33
SYNPO-205ENST00000522122 TAP2Q03519 686 aa12.98□□□□□ -0.33
SYNPO-205ENST00000522122 GBX1Q14549 363 aa12.98□□□□□ -0.33
SYNPO-205ENST00000522122 FCRLBQ6BAA4 426 aa12.98□□□□□ -0.33
SYNPO-205ENST00000522122 TMEM163Q8TC26 289 aa12.98□□□□□ -0.33
SYNPO-205ENST00000522122 PLCXD1Q9NUJ7 323 aa12.98□□□□□ -0.33
SYNPO-205ENST00000522122 WASHC1A8K0Z3 465 aa12.98□□□□□ -0.33
SYNPO-205ENST00000522122 PRAMEF2O60811 474 aa12.98□□□□□ -0.33
SYNPO-205ENST00000522122 ZNF888P0CJ79 500 aaPredicted RBP12.98□□□□□ -0.33
SYNPO-205ENST00000522122 IMPA1P29218 277 aa12.98□□□□□ -0.33
SYNPO-205ENST00000522122 SOX9P48436 509 aa12.98□□□□□ -0.33
SYNPO-205ENST00000522122 PTH2RP49190 550 aa12.98□□□□□ -0.33
SYNPO-205ENST00000522122 PRPS1P60891 318 aa12.98□□□□□ -0.33
SYNPO-205ENST00000522122 RAB11BQ15907 218 aa12.98□□□□□ -0.33
SYNPO-205ENST00000522122 INAVAQ3KP66 663 aa12.98□□□□□ -0.33
SYNPO-205ENST00000522122 WASH2PQ6VEQ5 465 aa12.98□□□□□ -0.33
SYNPO-205ENST00000522122 SIMC1Q8NDZ2 872 aa12.98□□□□□ -0.33
SYNPO-205ENST00000522122 THAP7Q9BT49 309 aaPredicted RBP12.98□□□□□ -0.33
SYNPO-205ENST00000522122 ZNF334Q9HCZ1 680 aaPredicted RBP12.98□□□□□ -0.33
SYNPO-205ENST00000522122 USP36Q9P275 1121 aaKnown RBP12.98□□□□□ -0.33
SYNPO-205ENST00000522122 CLUP10909 449 aa12.97□□□□□ -0.33
SYNPO-205ENST00000522122 FUT1P19526 365 aa12.97□□□□□ -0.33
SYNPO-205ENST00000522122 PRKXP51817 358 aa12.97□□□□□ -0.33
SYNPO-205ENST00000522122 FGL1Q08830 312 aa12.97□□□□□ -0.33
SYNPO-205ENST00000522122 ACSM3Q53FZ2 586 aa12.97□□□□□ -0.33
SYNPO-205ENST00000522122 PIP5KL1Q5T9C9 394 aa12.97□□□□□ -0.33
SYNPO-205ENST00000522122 FAM83HQ6ZRV2 1179 aaPredicted RBP12.97□□□□□ -0.33
SYNPO-205ENST00000522122 TTLL10Q6ZVT0 673 aa12.97□□□□□ -0.33
SYNPO-205ENST00000522122 ELP5Q8TE02 316 aa12.97□□□□□ -0.33
SYNPO-205ENST00000522122 SHDQ96IW2 340 aa12.97□□□□□ -0.33
SYNPO-205ENST00000522122 C1QTNF2Q9BXJ5 285 aa12.97□□□□□ -0.33
SYNPO-205ENST00000522122 OR52D1Q9H346 318 aa12.97□□□□□ -0.33
SYNPO-205ENST00000522122 OR2S2Q9NQN1 319 aa12.97□□□□□ -0.33
SYNPO-205ENST00000522122 ENTPD2Q9Y5L3 495 aa12.97□□□□□ -0.33
SYNPO-205ENST00000522122 SHROOM3Q8TF72 1996 aa12.97□□□□□ -0.33
SYNPO-205ENST00000522122 TRAV18A0A075B6X5 111 aa12.97□□□□□ -0.33
SYNPO-205ENST00000522122 KIAA0355O15063 1070 aa12.97□□□□□ -0.33
SYNPO-205ENST00000522122 ADAM23O75077 832 aa12.97□□□□□ -0.33
SYNPO-205ENST00000522122 APOC3P02656 99 aa12.97□□□□□ -0.33
SYNPO-205ENST00000522122 GRM7Q14831 915 aa12.97□□□□□ -0.33
SYNPO-205ENST00000522122 SGCAQ16586 387 aa12.97□□□□□ -0.33
SYNPO-205ENST00000522122 SLC18B1Q6NT16 456 aa12.97□□□□□ -0.33
SYNPO-205ENST00000522122 CELF2-AS1Q8N7Q2 184 aa12.97□□□□□ -0.33
SYNPO-205ENST00000522122 OR5T2Q8NGG2 359 aa12.97□□□□□ -0.33
SYNPO-205ENST00000522122 THAP3Q8WTV1 239 aaPredicted RBP12.97□□□□□ -0.33
SYNPO-205ENST00000522122 BPIFA2Q96DR5 249 aa12.97□□□□□ -0.33
SYNPO-205ENST00000522122 IER3IP1Q9Y5U9 82 aa12.97□□□□□ -0.33
SYNPO-205ENST00000522122 CACNG2Q9Y698 323 aa12.97□□□□□ -0.33
SYNPO-205ENST00000522122 TP53I11O14683 189 aa12.97□□□□□ -0.33
SYNPO-205ENST00000522122 TRAPPC6AO75865 159 aa12.97□□□□□ -0.33
SYNPO-205ENST00000522122 AHRP35869 848 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms