RNA–Protein interactions for RNA: ENST00000521559.1

VPS13B-209, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 466 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-209ENST00000521559 C12orf66Q96MD2 445 aa2.94□□□□□ -1.94
VPS13B-209ENST00000521559 C17orf77Q96MU5 243 aa2.94□□□□□ -1.94
VPS13B-209ENST00000521559 FOPNLQ96NB1 174 aa2.94□□□□□ -1.94
VPS13B-209ENST00000521559 PAFAH2Q99487 392 aa2.94□□□□□ -1.94
VPS13B-209ENST00000521559 ROPN1BQ9BZX4 212 aaPredicted RBP2.94□□□□□ -1.94
VPS13B-209ENST00000521559 DERL2Q9GZP9 239 aa2.94□□□□□ -1.94
VPS13B-209ENST00000521559 LRRN3Q9H3W5 708 aa2.94□□□□□ -1.94
VPS13B-209ENST00000521559 TFB2MQ9H5Q4 396 aaKnown RBP2.94□□□□□ -1.94
VPS13B-209ENST00000521559 KIR3DX1Q9H7L2 352 aa2.94□□□□□ -1.94
VPS13B-209ENST00000521559 CAB39LQ9H9S4 337 aa2.94□□□□□ -1.94
VPS13B-209ENST00000521559 ROPN1Q9HAT0 212 aaPredicted RBP2.94□□□□□ -1.94
VPS13B-209ENST00000521559 PARVBQ9HBI1 364 aa2.94□□□□□ -1.94
VPS13B-209ENST00000521559 NMRAL1Q9HBL8 299 aa2.94□□□□□ -1.94
VPS13B-209ENST00000521559 SLC40A1Q9NP59 571 aa2.94□□□□□ -1.94
VPS13B-209ENST00000521559 IMP3Q9NV31 184 aaKnown RBP2.94□□□□□ -1.94
VPS13B-209ENST00000521559 EURLQ9NYK6 297 aa2.94□□□□□ -1.94
VPS13B-209ENST00000521559 LNPEPQ9UIQ6 1025 aa2.94□□□□□ -1.94
VPS13B-209ENST00000521559 PCDHGB4Q9UN71 923 aa2.94□□□□□ -1.94
VPS13B-209ENST00000521559 RUVBL2Q9Y230 463 aaKnown RBP2.94□□□□□ -1.94
VPS13B-209ENST00000521559 ASF1AQ9Y294 204 aa2.94□□□□□ -1.94
VPS13B-209ENST00000521559 TMEM5Q9Y2B1 443 aa2.94□□□□□ -1.94
VPS13B-209ENST00000521559 ACOT9Q9Y305 439 aa2.94□□□□□ -1.94
VPS13B-209ENST00000521559 PCDHGA1Q9Y5H4 931 aa2.94□□□□□ -1.94
VPS13B-209ENST00000521559 RNF215Q9Y6U7 377 aa2.94□□□□□ -1.94
VPS13B-209ENST00000521559 MIA3Q5JRA6 1907 aa2.93□□□□□ -1.94
VPS13B-209ENST00000521559 PRUNE2Q8WUY3 3088 aa2.93□□□□□ -1.94
VPS13B-209ENST00000521559 GPR179Q6PRD1 2367 aa2.93□□□□□ -1.94
VPS13B-209ENST00000521559 ZNF318Q5VUA4 2279 aa2.93□□□□□ -1.94
VPS13B-209ENST00000521559 MYO18AQ92614 2054 aaKnown RBP2.93□□□□□ -1.94
VPS13B-209ENST00000521559 IGHV1OR21-1A0A087WYE8 117 aa2.93□□□□□ -1.94
VPS13B-209ENST00000521559 SPAARA0A1B0GVQ0 90 aa2.93□□□□□ -1.94
VPS13B-209ENST00000521559 A0A1W2PPM1 405 aa2.93□□□□□ -1.94
VPS13B-209ENST00000521559 A0A1W2PQ09 198 aa2.93□□□□□ -1.94
VPS13B-209ENST00000521559 OR6C74A6NCV1 312 aa2.93□□□□□ -1.94
VPS13B-209ENST00000521559 SMIM23A6NLE4 172 aa2.93□□□□□ -1.94
VPS13B-209ENST00000521559 EIF4E1BA6NMX2 242 aaKnown RBP2.93□□□□□ -1.94
VPS13B-209ENST00000521559 ARHGEF33A8MVX0 844 aa2.93□□□□□ -1.94
VPS13B-209ENST00000521559 BLOC1S5-TXNDC5H3BN57 136 aa2.93□□□□□ -1.94
VPS13B-209ENST00000521559 TMX2-CTNND1H3BSU7 103 aa2.93□□□□□ -1.94
VPS13B-209ENST00000521559 M0QZ24 198 aa2.93□□□□□ -1.94
VPS13B-209ENST00000521559 CDC7O00311 574 aa2.93□□□□□ -1.94
VPS13B-209ENST00000521559 CDH16O75309 829 aa2.93□□□□□ -1.94
VPS13B-209ENST00000521559 PDE9AO76083 593 aa2.93□□□□□ -1.94
VPS13B-209ENST00000521559 PROS1P07225 676 aa2.93□□□□□ -1.94
VPS13B-209ENST00000521559 RBP1P09455 135 aa2.93□□□□□ -1.94
VPS13B-209ENST00000521559 HIST1H2AGP0C0S8 130 aaPredicted RBP2.93□□□□□ -1.94
VPS13B-209ENST00000521559 TPBGLP0DKB5 382 aa2.93□□□□□ -1.94
VPS13B-209ENST00000521559 FGF5P12034 268 aa2.93□□□□□ -1.94
VPS13B-209ENST00000521559 CYP2A7P20853 494 aa2.93□□□□□ -1.94
VPS13B-209ENST00000521559 ALDH4A1P30038 563 aa2.93□□□□□ -1.94
VPS13B-209ENST00000521559 PKLRP30613 574 aa2.93□□□□□ -1.94
VPS13B-209ENST00000521559 GCH1P30793 250 aa2.93□□□□□ -1.94
VPS13B-209ENST00000521559 SHMT2P34897 504 aa2.93□□□□□ -1.94
VPS13B-209ENST00000521559 BDKRB1P46663 353 aa2.93□□□□□ -1.94
VPS13B-209ENST00000521559 SLCO1A2P46721 670 aa2.93□□□□□ -1.94
VPS13B-209ENST00000521559 NOVA1P51513 510 aaKnown RBP2.93□□□□□ -1.94
VPS13B-209ENST00000521559 NR0B1P51843 470 aaKnown RBP2.93□□□□□ -1.94
VPS13B-209ENST00000521559 AP1S2P56377 157 aa2.93□□□□□ -1.94
VPS13B-209ENST00000521559 OR1D5P58170 312 aa2.93□□□□□ -1.94
VPS13B-209ENST00000521559 ATP6V0D1P61421 351 aa2.93□□□□□ -1.94
VPS13B-209ENST00000521559 CCL7P80098 99 aa2.93□□□□□ -1.94
VPS13B-209ENST00000521559 RPL24P83731 157 aaKnown RBP2.93□□□□□ -1.94
VPS13B-209ENST00000521559 CDKL1Q00532 357 aa2.93□□□□□ -1.94
VPS13B-209ENST00000521559 ZFP36L1Q07352 338 aaKnown RBP2.93□□□□□ -1.94
VPS13B-209ENST00000521559 EPS8Q12929 822 aa2.93□□□□□ -1.94
VPS13B-209ENST00000521559 AIMP2Q13155 320 aaKnown RBP2.93□□□□□ -1.94
VPS13B-209ENST00000521559 GRB7Q14451 532 aa2.93□□□□□ -1.94
VPS13B-209ENST00000521559 CASP8Q14790 479 aa2.93□□□□□ -1.94
VPS13B-209ENST00000521559 ARHGAP19Q14CB8 494 aa2.93□□□□□ -1.94
VPS13B-209ENST00000521559 FAM83EQ2M2I3 478 aa2.93□□□□□ -1.94
VPS13B-209ENST00000521559 PCGF3Q3KNV8 242 aa2.93□□□□□ -1.94
VPS13B-209ENST00000521559 ZNF876PQ49A33 203 aa2.93□□□□□ -1.94
VPS13B-209ENST00000521559 CCSMST1Q4G0I0 132 aa2.93□□□□□ -1.94
VPS13B-209ENST00000521559 TAF1BQ53T94 588 aaPredicted RBP2.93□□□□□ -1.94
VPS13B-209ENST00000521559 CDKL4Q5MAI5 379 aa2.93□□□□□ -1.94
VPS13B-209ENST00000521559 NKAIN2Q5VXU1 208 aa2.93□□□□□ -1.94
VPS13B-209ENST00000521559 ARHGAP11AQ6P4F7 1023 aa2.93□□□□□ -1.94
VPS13B-209ENST00000521559 WDR74Q6RFH5 385 aaPredicted RBP2.93□□□□□ -1.94
VPS13B-209ENST00000521559 SH2D5Q6ZV89 423 aa2.93□□□□□ -1.94
VPS13B-209ENST00000521559 CMC1Q7Z7K0 106 aa2.93□□□□□ -1.94
VPS13B-209ENST00000521559 ADAMTSL2Q86TH1 951 aa2.93□□□□□ -1.94
VPS13B-209ENST00000521559 ISCA2Q86U28 154 aa2.93□□□□□ -1.94
VPS13B-209ENST00000521559 LCA5Q86VQ0 697 aa2.93□□□□□ -1.94
VPS13B-209ENST00000521559 AMIGO1Q86WK6 493 aa2.93□□□□□ -1.94
VPS13B-209ENST00000521559 OR8H2Q8N162 312 aa2.93□□□□□ -1.94
VPS13B-209ENST00000521559 RAB42Q8N4Z0 105 aa2.93□□□□□ -1.94
VPS13B-209ENST00000521559 ZNF248Q8NDW4 579 aa2.93□□□□□ -1.94
VPS13B-209ENST00000521559 OR4E2Q8NGC2 313 aa2.93□□□□□ -1.94
VPS13B-209ENST00000521559 OR52E1Q8NGJ3 308 aa2.93□□□□□ -1.94
VPS13B-209ENST00000521559 OR5AR1Q8NGP9 310 aa2.93□□□□□ -1.94
VPS13B-209ENST00000521559 OR1J2Q8NGS2 313 aa2.93□□□□□ -1.94
VPS13B-209ENST00000521559 OR9A1PQ8NGU1 263 aa2.93□□□□□ -1.94
VPS13B-209ENST00000521559 OR2L8Q8NGY9 312 aa2.93□□□□□ -1.94
VPS13B-209ENST00000521559 OR52I2Q8NH67 350 aa2.93□□□□□ -1.94
VPS13B-209ENST00000521559 OR10G6Q8NH81 332 aa2.93□□□□□ -1.94
VPS13B-209ENST00000521559 OR5R1Q8NH85 324 aa2.93□□□□□ -1.94
VPS13B-209ENST00000521559 OR5K2Q8NHB8 316 aa2.93□□□□□ -1.94
VPS13B-209ENST00000521559 HMGCLL1Q8TB92 370 aa2.93□□□□□ -1.94
VPS13B-209ENST00000521559 STAG3L4Q8TBR4 150 aa2.93□□□□□ -1.94
VPS13B-209ENST00000521559 ACMSDQ8TDX5 336 aa2.93□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms