RNA–Protein interactions for RNA: ENST00000521216.5

SKP1-208, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SKP1, Length 899 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-208ENST00000521216 ADRA1AP35348 466 aa3.64□□□□□ -1.83
SKP1-208ENST00000521216 DLSTP36957 453 aa3.64□□□□□ -1.83
SKP1-208ENST00000521216 RPL29P47914 159 aaKnown RBP3.64□□□□□ -1.83
SKP1-208ENST00000521216 GPC3P51654 580 aa3.64□□□□□ -1.83
SKP1-208ENST00000521216 ST3GAL3Q11203 375 aa3.64□□□□□ -1.83
SKP1-208ENST00000521216 PRR4Q16378 134 aa3.64□□□□□ -1.83
SKP1-208ENST00000521216 MAPK6Q16659 721 aa3.64□□□□□ -1.83
SKP1-208ENST00000521216 ZNF311Q5JNZ3 666 aa3.64□□□□□ -1.83
SKP1-208ENST00000521216 FAM120AOSQ5T036 256 aa3.64□□□□□ -1.83
SKP1-208ENST00000521216 ARSKQ6UWY0 536 aa3.64□□□□□ -1.83
SKP1-208ENST00000521216 TFAP2EQ6VUC0 442 aa3.64□□□□□ -1.83
SKP1-208ENST00000521216 FRA10AC1Q70Z53 315 aa3.64□□□□□ -1.83
SKP1-208ENST00000521216 CATSPER4Q7RTX7 472 aa3.64□□□□□ -1.83
SKP1-208ENST00000521216 Q8N7P7 452 aa3.64□□□□□ -1.83
SKP1-208ENST00000521216 M1APQ8TC57 530 aa3.64□□□□□ -1.83
SKP1-208ENST00000521216 IL1F10Q8WWZ1 152 aa3.64□□□□□ -1.83
SKP1-208ENST00000521216 RHOJQ9H4E5 214 aa3.64□□□□□ -1.83
SKP1-208ENST00000521216 DHX33Q9H6R0 707 aaKnown RBP3.64□□□□□ -1.83
SKP1-208ENST00000521216 PTGES2Q9H7Z7 377 aa3.64□□□□□ -1.83
SKP1-208ENST00000521216 CAB39LQ9H9S4 337 aa3.64□□□□□ -1.83
SKP1-208ENST00000521216 AGPAT5Q9NUQ2 364 aa3.64□□□□□ -1.83
SKP1-208ENST00000521216 PAK1IP1Q9NWT1 392 aaPredicted RBP3.64□□□□□ -1.83
SKP1-208ENST00000521216 TMEM9Q9P0T7 183 aa3.64□□□□□ -1.83
SKP1-208ENST00000521216 XPO7Q9UIA9 1087 aaKnown RBP3.64□□□□□ -1.83
SKP1-208ENST00000521216 JAK2O60674 1132 aa3.63□□□□□ -1.83
SKP1-208ENST00000521216 MBD3O95983 291 aa3.63□□□□□ -1.83
SKP1-208ENST00000521216 HBQ1P09105 142 aa3.63□□□□□ -1.83
SKP1-208ENST00000521216 CPN1P15169 458 aa3.63□□□□□ -1.83
SKP1-208ENST00000521216 TNNI3P19429 210 aa3.63□□□□□ -1.83
SKP1-208ENST00000521216 AZU1P20160 251 aa3.63□□□□□ -1.83
SKP1-208ENST00000521216 MRPS11P82912 194 aaKnown RBP3.63□□□□□ -1.83
SKP1-208ENST00000521216 DPYSL3Q14195 570 aa3.63□□□□□ -1.83
SKP1-208ENST00000521216 TMEM179BQ7Z7N9 219 aa3.63□□□□□ -1.83
SKP1-208ENST00000521216 ZBTB44Q8NCP5 570 aa3.63□□□□□ -1.83
SKP1-208ENST00000521216 LINC01006Q8NI28 216 aa3.63□□□□□ -1.83
SKP1-208ENST00000521216 CCDC110Q8TBZ0 833 aa3.63□□□□□ -1.83
SKP1-208ENST00000521216 ANKRD49Q8WVL7 239 aa3.63□□□□□ -1.83
SKP1-208ENST00000521216 ITFG2Q969R8 447 aa3.63□□□□□ -1.83
SKP1-208ENST00000521216 FEM1AQ9BSK4 669 aa3.63□□□□□ -1.83
SKP1-208ENST00000521216 CNPY3Q9BT09 278 aa3.63□□□□□ -1.83
SKP1-208ENST00000521216 EHD1Q9H4M9 534 aa3.63□□□□□ -1.83
SKP1-208ENST00000521216 ECT2Q9H8V3 914 aa3.63□□□□□ -1.83
SKP1-208ENST00000521216 ADAM22Q9P0K1 906 aa3.63□□□□□ -1.83
SKP1-208ENST00000521216 ANKMY1Q9P2S6 941 aa3.63□□□□□ -1.83
SKP1-208ENST00000521216 SAMD4AQ9UPU9 718 aaKnown RBP3.63□□□□□ -1.83
SKP1-208ENST00000521216 RNF6Q9Y252 685 aa3.63□□□□□ -1.83
SKP1-208ENST00000521216 ATP8B3O60423 1300 aa3.63□□□□□ -1.83
SKP1-208ENST00000521216 OR6C65A6NJZ3 312 aa3.62□□□□□ -1.83
SKP1-208ENST00000521216 LANCL1O43813 399 aa3.62□□□□□ -1.83
SKP1-208ENST00000521216 TBL1XO60907 577 aa3.62□□□□□ -1.83
SKP1-208ENST00000521216 GPX5O75715 221 aa3.62□□□□□ -1.83
SKP1-208ENST00000521216 CABYRO75952 493 aa3.62□□□□□ -1.83
SKP1-208ENST00000521216 ACTL6AO96019 429 aa3.62□□□□□ -1.83
SKP1-208ENST00000521216 IGHV3-23P01764 117 aa3.62□□□□□ -1.83
SKP1-208ENST00000521216 OR8U8P0C7N1 319 aa3.62□□□□□ -1.83
SKP1-208ENST00000521216 DRD3P35462 400 aa3.62□□□□□ -1.83
SKP1-208ENST00000521216 PEX19P40855 299 aa3.62□□□□□ -1.83
SKP1-208ENST00000521216 BDKRB1P46663 353 aa3.62□□□□□ -1.83
SKP1-208ENST00000521216 OR2B11Q5JQS5 317 aa3.62□□□□□ -1.83
SKP1-208ENST00000521216 NIPAL3Q6P499 406 aa3.62□□□□□ -1.83
SKP1-208ENST00000521216 LRRC8BQ6P9F7 803 aa3.62□□□□□ -1.83
SKP1-208ENST00000521216 SERPINA9Q86WD7 417 aa3.62□□□□□ -1.83
SKP1-208ENST00000521216 TGIF2LYQ8IUE0 185 aa3.62□□□□□ -1.83
SKP1-208ENST00000521216 OR5AU1Q8NGC0 362 aa3.62□□□□□ -1.83
SKP1-208ENST00000521216 HAVCR1Q96D42 359 aa3.62□□□□□ -1.83
SKP1-208ENST00000521216 AKR1E2Q96JD6 320 aa3.62□□□□□ -1.83
SKP1-208ENST00000521216 TESK2Q96S53 571 aa3.62□□□□□ -1.83
SKP1-208ENST00000521216 ISG20L2Q9H9L3 353 aaKnown RBP3.62□□□□□ -1.83
SKP1-208ENST00000521216 FANCFQ9NPI8 374 aa3.62□□□□□ -1.83
SKP1-208ENST00000521216 MRPL39Q9NYK5 338 aaKnown RBP3.62□□□□□ -1.83
SKP1-208ENST00000521216 OR1A1Q9P1Q5 309 aa3.62□□□□□ -1.83
SKP1-208ENST00000521216 SPRR3Q9UBC9 169 aa3.62□□□□□ -1.83
SKP1-208ENST00000521216 CYTH4Q9UIA0 394 aa3.62□□□□□ -1.83
SKP1-208ENST00000521216 LRRK1Q38SD2 2015 aa3.61□□□□□ -1.83
SKP1-208ENST00000521216 TDRD6O60522 2096 aaKnown RBP3.61□□□□□ -1.83
SKP1-208ENST00000521216 SMIM28A0A1B0GU29 152 aa3.61□□□□□ -1.83
SKP1-208ENST00000521216 F8WDY8 70 aa3.61□□□□□ -1.83
SKP1-208ENST00000521216 CHADO15335 359 aa3.61□□□□□ -1.83
SKP1-208ENST00000521216 STX7O15400 261 aaKnown RBP3.61□□□□□ -1.83
SKP1-208ENST00000521216 TRIM16O95361 564 aa3.61□□□□□ -1.83
SKP1-208ENST00000521216 GCKP35557 465 aa3.61□□□□□ -1.83
SKP1-208ENST00000521216 STARP49675 285 aa3.61□□□□□ -1.83
SKP1-208ENST00000521216 PDZK1IP1Q13113 114 aa3.61□□□□□ -1.83
SKP1-208ENST00000521216 SCGB2A2Q13296 93 aa3.61□□□□□ -1.83
SKP1-208ENST00000521216 HSP90B2PQ58FF3 399 aa3.61□□□□□ -1.83
SKP1-208ENST00000521216 LCE3EQ5T5B0 92 aa3.61□□□□□ -1.83
SKP1-208ENST00000521216 C12orf60Q5U649 245 aa3.61□□□□□ -1.83
SKP1-208ENST00000521216 METTL11BQ5VVY1 283 aa3.61□□□□□ -1.83
SKP1-208ENST00000521216 PVRIGQ6DKI7 326 aa3.61□□□□□ -1.83
SKP1-208ENST00000521216 ASPHD2Q6ICH7 369 aa3.61□□□□□ -1.83
SKP1-208ENST00000521216 CXCL17Q6UXB2 119 aa3.61□□□□□ -1.83
SKP1-208ENST00000521216 HSD17B13Q7Z5P4 300 aaPredicted RBP3.61□□□□□ -1.83
SKP1-208ENST00000521216 KRTAP11-1Q8IUC1 163 aa3.61□□□□□ -1.83
SKP1-208ENST00000521216 MNS1Q8NEH6 495 aa3.61□□□□□ -1.83
SKP1-208ENST00000521216 OR2A12Q8NGT7 310 aa3.61□□□□□ -1.83
SKP1-208ENST00000521216 MS4A14Q96JA4 679 aa3.61□□□□□ -1.83
SKP1-208ENST00000521216 TECTBQ96PL2 329 aa3.61□□□□□ -1.83
SKP1-208ENST00000521216 IL4I1Q96RQ9 567 aa3.61□□□□□ -1.83
SKP1-208ENST00000521216 CRNKL1Q9BZJ0 848 aaKnown RBP3.61□□□□□ -1.83
SKP1-208ENST00000521216 CCSER1Q9C0I3 900 aa3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms