RNA–Protein interactions for RNA: ENST00000520946.1

MRPS28-206, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 5

Gene MRPS28, Length 411 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-206ENST00000520946 MISPQ8IVT2 679 aa10.24□□□□□ -0.77
MRPS28-206ENST00000520946 PIAS4Q8N2W9 510 aaPredicted RBP10.24□□□□□ -0.77
MRPS28-206ENST00000520946 ATP6V1C2Q8NEY4 427 aa10.24□□□□□ -0.77
MRPS28-206ENST00000520946 LILRB1Q8NHL6 650 aaPredicted RBP10.24□□□□□ -0.77
MRPS28-206ENST00000520946 CEP70Q8NHQ1 597 aa10.24□□□□□ -0.77
MRPS28-206ENST00000520946 PIWIL2Q8TC59 973 aaKnown RBP10.24□□□□□ -0.77
MRPS28-206ENST00000520946 PIK3R3Q92569 461 aa10.24□□□□□ -0.77
MRPS28-206ENST00000520946 ELP4Q96EB1 424 aa10.24□□□□□ -0.77
MRPS28-206ENST00000520946 C11orf24Q96F05 449 aaPredicted RBP10.24□□□□□ -0.77
MRPS28-206ENST00000520946 TNFRSF13CQ96RJ3 184 aa10.24□□□□□ -0.77
MRPS28-206ENST00000520946 LMF2Q9BU23 707 aaKnown RBP10.24□□□□□ -0.77
MRPS28-206ENST00000520946 MED17Q9NVC6 651 aa10.24□□□□□ -0.77
MRPS28-206ENST00000520946 STAB1Q9NY15 2570 aa10.24□□□□□ -0.77
MRPS28-206ENST00000520946 GXYLT2A0PJZ3 443 aa10.23□□□□□ -0.77
MRPS28-206ENST00000520946 POC1B-GALNT4F8VUJ3 575 aa10.23□□□□□ -0.77
MRPS28-206ENST00000520946 NTN1O95631 604 aa10.23□□□□□ -0.77
MRPS28-206ENST00000520946 ENO1P06733 434 aaKnown RBP10.23□□□□□ -0.77
MRPS28-206ENST00000520946 YES1P07947 543 aa10.23□□□□□ -0.77
MRPS28-206ENST00000520946 BMP4P12644 408 aa10.23□□□□□ -0.77
MRPS28-206ENST00000520946 PTNP21246 168 aa10.23□□□□□ -0.77
MRPS28-206ENST00000520946 C21orf58P58505 322 aa10.23□□□□□ -0.77
MRPS28-206ENST00000520946 SLC18A2Q05940 514 aa10.23□□□□□ -0.77
MRPS28-206ENST00000520946 HSPB3Q12988 150 aa10.23□□□□□ -0.77
MRPS28-206ENST00000520946 SLC29A2Q14542 456 aa10.23□□□□□ -0.77
MRPS28-206ENST00000520946 TMEM44Q2T9K0 475 aa10.23□□□□□ -0.77
MRPS28-206ENST00000520946 TMEM249Q2WGJ8 235 aa10.23□□□□□ -0.77
MRPS28-206ENST00000520946 PGGHGQ32M88 737 aa10.23□□□□□ -0.77
MRPS28-206ENST00000520946 GLE1Q53GS7 698 aaKnown RBP10.23□□□□□ -0.77
MRPS28-206ENST00000520946 FCRLAQ7L513 359 aa10.23□□□□□ -0.77
MRPS28-206ENST00000520946 SSX8Q7RTT4 187 aa10.23□□□□□ -0.77
MRPS28-206ENST00000520946 NUFIP2Q7Z417 695 aaKnown RBP10.23□□□□□ -0.77
MRPS28-206ENST00000520946 TRABD2AQ86V40 505 aa10.23□□□□□ -0.77
MRPS28-206ENST00000520946 FBXL14Q8N1E6 418 aa10.23□□□□□ -0.77
MRPS28-206ENST00000520946 OR2L13Q8N349 312 aa10.23□□□□□ -0.77
MRPS28-206ENST00000520946 B4GALNT2Q8NHY0 566 aa10.23□□□□□ -0.77
MRPS28-206ENST00000520946 ZFP28Q8NHY6 868 aa10.23□□□□□ -0.77
MRPS28-206ENST00000520946 ACTRT2Q8TDY3 377 aa10.23□□□□□ -0.77
MRPS28-206ENST00000520946 ABHD3Q8WU67 409 aa10.23□□□□□ -0.77
MRPS28-206ENST00000520946 JADE3Q92613 823 aa10.23□□□□□ -0.77
MRPS28-206ENST00000520946 ARL8AQ96BM9 186 aa10.23□□□□□ -0.77
MRPS28-206ENST00000520946 RADILQ96JH8 1075 aa10.23□□□□□ -0.77
MRPS28-206ENST00000520946 ZNF382Q96SR6 550 aa10.23□□□□□ -0.77
MRPS28-206ENST00000520946 TRAF4Q9BUZ4 470 aaPredicted RBP10.23□□□□□ -0.77
MRPS28-206ENST00000520946 TRIM2Q9C040 744 aa10.23□□□□□ -0.77
MRPS28-206ENST00000520946 GLIPR2Q9H4G4 154 aa10.23□□□□□ -0.77
MRPS28-206ENST00000520946 ACSS3Q9H6R3 686 aa10.23□□□□□ -0.77
MRPS28-206ENST00000520946 KLHL13Q9P2N7 655 aa10.23□□□□□ -0.77
MRPS28-206ENST00000520946 TIMM22Q9Y584 194 aa10.23□□□□□ -0.77
MRPS28-206ENST00000520946 FBN1P35555 2871 aaKnown RBP10.22□□□□□ -0.77
MRPS28-206ENST00000520946 IGHV4-30-2A0A087WSY4 118 aa10.22□□□□□ -0.77
MRPS28-206ENST00000520946 DPRXA6NFQ7 191 aa10.22□□□□□ -0.77
MRPS28-206ENST00000520946 TRIM49D1C9J1S8 452 aa10.22□□□□□ -0.77
MRPS28-206ENST00000520946 ALG1L2C9J202 215 aa10.22□□□□□ -0.77
MRPS28-206ENST00000520946 H3BNH8 94 aa10.22□□□□□ -0.77
MRPS28-206ENST00000520946 GTPBP1O00178 669 aaKnown RBP10.22□□□□□ -0.77
MRPS28-206ENST00000520946 ABCD4O14678 606 aa10.22□□□□□ -0.77
MRPS28-206ENST00000520946 RAMP1O60894 148 aa10.22□□□□□ -0.77
MRPS28-206ENST00000520946 GCM2O75603 506 aaPredicted RBP10.22□□□□□ -0.77
MRPS28-206ENST00000520946 LYZL6O75951 148 aa10.22□□□□□ -0.77
MRPS28-206ENST00000520946 OXSR1O95747 527 aaPredicted RBP10.22□□□□□ -0.77
MRPS28-206ENST00000520946 GSTA1P08263 222 aa10.22□□□□□ -0.77
MRPS28-206ENST00000520946 CTAGE8P0CG41 777 aa10.22□□□□□ -0.77
MRPS28-206ENST00000520946 SLC25A16P16260 332 aa10.22□□□□□ -0.77
MRPS28-206ENST00000520946 SRD5A1P18405 259 aa10.22□□□□□ -0.77
MRPS28-206ENST00000520946 HNF1AP20823 631 aa10.22□□□□□ -0.77
MRPS28-206ENST00000520946 ATP6V1C1P21283 382 aa10.22□□□□□ -0.77
MRPS28-206ENST00000520946 SLC7A1P30825 629 aa10.22□□□□□ -0.77
MRPS28-206ENST00000520946 SERPINB4P48594 390 aa10.22□□□□□ -0.77
MRPS28-206ENST00000520946 PKNOX1P55347 436 aa10.22□□□□□ -0.77
MRPS28-206ENST00000520946 ZNF239Q16600 458 aaKnown RBP10.22□□□□□ -0.77
MRPS28-206ENST00000520946 PLPPR5Q32ZL2 321 aa10.22□□□□□ -0.77
MRPS28-206ENST00000520946 TMEM176BQ3YBM2 270 aaPredicted RBP10.22□□□□□ -0.77
MRPS28-206ENST00000520946 SLC22A25Q6T423 547 aa10.22□□□□□ -0.77
MRPS28-206ENST00000520946 KLHL17Q6TDP4 642 aa10.22□□□□□ -0.77
MRPS28-206ENST00000520946 APOOLQ6UXV4 268 aa10.22□□□□□ -0.77
MRPS28-206ENST00000520946 TFAP2EQ6VUC0 442 aa10.22□□□□□ -0.77
MRPS28-206ENST00000520946 DNAJC14Q6Y2X3 702 aaPredicted RBP10.22□□□□□ -0.77
MRPS28-206ENST00000520946 SLC22A9Q8IVM8 553 aa10.22□□□□□ -0.77
MRPS28-206ENST00000520946 CTAGE4Q8IX94 777 aa10.22□□□□□ -0.77
MRPS28-206ENST00000520946 ZNF100Q8IYN0 542 aa10.22□□□□□ -0.77
MRPS28-206ENST00000520946 GABRG1Q8N1C3 465 aa10.22□□□□□ -0.77
MRPS28-206ENST00000520946 SLC43A2Q8N370 569 aa10.22□□□□□ -0.77
MRPS28-206ENST00000520946 CDRT4Q8N9R6 151 aa10.22□□□□□ -0.77
MRPS28-206ENST00000520946 OR6Y1Q8NGX8 325 aa10.22□□□□□ -0.77
MRPS28-206ENST00000520946 OR4C3Q8NH37 302 aa10.22□□□□□ -0.77
MRPS28-206ENST00000520946 RNF128Q8TEB7 428 aa10.22□□□□□ -0.77
MRPS28-206ENST00000520946 FAM168AQ92567 244 aa10.22□□□□□ -0.77
MRPS28-206ENST00000520946 ADGRG7Q96K78 797 aa10.22□□□□□ -0.77
MRPS28-206ENST00000520946 AMDHD1Q96NU7 426 aa10.22□□□□□ -0.77
MRPS28-206ENST00000520946 PAFAH2Q99487 392 aa10.22□□□□□ -0.77
MRPS28-206ENST00000520946 C19orf24Q9BVV8 132 aa10.22□□□□□ -0.77
MRPS28-206ENST00000520946 C1QTNF3Q9BXJ4 246 aa10.22□□□□□ -0.77
MRPS28-206ENST00000520946 CACNG6Q9BXT2 260 aa10.22□□□□□ -0.77
MRPS28-206ENST00000520946 UBQLN4Q9NRR5 601 aa10.22□□□□□ -0.77
MRPS28-206ENST00000520946 KLHL9Q9P2J3 617 aa10.22□□□□□ -0.77
MRPS28-206ENST00000520946 B3GALT5Q9Y2C3 310 aa10.22□□□□□ -0.77
MRPS28-206ENST00000520946 WBP11Q9Y2W2 641 aaKnown RBP10.22□□□□□ -0.77
MRPS28-206ENST00000520946 POLR3HQ9Y535 204 aaPredicted RBP10.22□□□□□ -0.77
MRPS28-206ENST00000520946 PCNX3Q9H6A9 2034 aa10.21□□□□□ -0.77
MRPS28-206ENST00000520946 C7orf72A4D263 438 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms