RNA–Protein interactions for RNA: ENST00000519321.5

SKP1-206, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 692 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-206ENST00000519321 GLYR1Q49A26 553 aaPredicted RBP20.54■□□□□ 0.88
SKP1-206ENST00000519321 NHSL2Q5HYW2 709 aa20.54■□□□□ 0.88
SKP1-206ENST00000519321 GCNT6Q5T4J0 391 aa20.54■□□□□ 0.88
SKP1-206ENST00000519321 YRDCQ86U90 279 aaKnown RBP20.54■□□□□ 0.88
SKP1-206ENST00000519321 IFNEQ86WN2 208 aa20.54■□□□□ 0.88
SKP1-206ENST00000519321 B4GALNT2Q8NHY0 566 aa20.54■□□□□ 0.88
SKP1-206ENST00000519321 SLC38A5Q8WUX1 472 aa20.54■□□□□ 0.88
SKP1-206ENST00000519321 CPPED1Q9BRF8 314 aaPredicted RBP20.54■□□□□ 0.88
SKP1-206ENST00000519321 THUMPD3Q9BV44 507 aaKnown RBP20.54■□□□□ 0.88
SKP1-206ENST00000519321 CACYBPQ9HB71 228 aaKnown RBP20.54■□□□□ 0.88
SKP1-206ENST00000519321 HRH3Q9Y5N1 445 aa20.54■□□□□ 0.88
SKP1-206ENST00000519321 NCKAP5O14513 1909 aa20.54■□□□□ 0.88
SKP1-206ENST00000519321 A0A087WZY1 265 aa20.53■□□□□ 0.88
SKP1-206ENST00000519321 C15orf38-AP3S2A0A0A6YYH1 394 aa20.53■□□□□ 0.88
SKP1-206ENST00000519321 TRGV8A0A0C4DH27 118 aa20.53■□□□□ 0.88
SKP1-206ENST00000519321 A0A0G2JPF8 293 aa20.53■□□□□ 0.88
SKP1-206ENST00000519321 HNRNPCL2B2RXH8 293 aa20.53■□□□□ 0.88
SKP1-206ENST00000519321 HNRNPCL3B7ZW38 293 aa20.53■□□□□ 0.88
SKP1-206ENST00000519321 C5orf58C9J3I9 102 aa20.53■□□□□ 0.88
SKP1-206ENST00000519321 NPIPA2E9PIF3 369 aa20.53■□□□□ 0.88
SKP1-206ENST00000519321 NPIPA3F8WFD2 350 aa20.53■□□□□ 0.88
SKP1-206ENST00000519321 HCRTR2O43614 444 aa20.53■□□□□ 0.88
SKP1-206ENST00000519321 EIF4E2O60573 245 aaKnown RBP20.53■□□□□ 0.88
SKP1-206ENST00000519321 HNRNPCL1O60812 293 aaKnown RBP20.53■□□□□ 0.88
SKP1-206ENST00000519321 DCTN3O75935 186 aa20.53■□□□□ 0.88
SKP1-206ENST00000519321 ZIC2O95409 532 aaPredicted RBP20.53■□□□□ 0.88
SKP1-206ENST00000519321 FAM107AO95990 144 aa20.53■□□□□ 0.88
SKP1-206ENST00000519321 ACTL6AO96019 429 aa20.53■□□□□ 0.88
SKP1-206ENST00000519321 TPOP07202 933 aa20.53■□□□□ 0.88
SKP1-206ENST00000519321 CHRM4P08173 479 aa20.53■□□□□ 0.88
SKP1-206ENST00000519321 HNRNPCL4P0DMR1 293 aa20.53■□□□□ 0.88
SKP1-206ENST00000519321 UBL4AP11441 157 aa20.53■□□□□ 0.88
SKP1-206ENST00000519321 COX4I1P13073 169 aa20.53■□□□□ 0.88
SKP1-206ENST00000519321 SUMO3P55854 103 aaPredicted RBP20.53■□□□□ 0.88
SKP1-206ENST00000519321 C4orf17Q53FE4 359 aa20.53■□□□□ 0.88
SKP1-206ENST00000519321 EIPR1Q53HC9 387 aa20.53■□□□□ 0.88
SKP1-206ENST00000519321 WIPI1Q5MNZ9 446 aaPredicted RBP20.53■□□□□ 0.88
SKP1-206ENST00000519321 WLSQ5T9L3 541 aa20.53■□□□□ 0.88
SKP1-206ENST00000519321 GKAP1Q5VSY0 366 aaPredicted RBP20.53■□□□□ 0.88
SKP1-206ENST00000519321 AAGABQ6PD74 315 aa20.53■□□□□ 0.88
SKP1-206ENST00000519321 EIF3MQ7L2H7 374 aaKnown RBP20.53■□□□□ 0.88
SKP1-206ENST00000519321 OLIG3Q7RTU3 272 aa20.53■□□□□ 0.88
SKP1-206ENST00000519321 FGD2Q7Z6J4 655 aa20.53■□□□□ 0.88
SKP1-206ENST00000519321 PEX5LQ8IYB4 626 aa20.53■□□□□ 0.88
SKP1-206ENST00000519321 LRRC58Q96CX6 371 aa20.53■□□□□ 0.88
SKP1-206ENST00000519321 CMTM5Q96DZ9 223 aa20.53■□□□□ 0.88
SKP1-206ENST00000519321 C1GALT1C1Q96EU7 318 aa20.53■□□□□ 0.88
SKP1-206ENST00000519321 TMEM38AQ9H6F2 299 aa20.53■□□□□ 0.88
SKP1-206ENST00000519321 ST6GALNAC1Q9NSC7 600 aaPredicted RBP20.53■□□□□ 0.88
SKP1-206ENST00000519321 KCNE5Q9UJ90 142 aa20.53■□□□□ 0.88
SKP1-206ENST00000519321 ACAD8Q9UKU7 415 aa20.53■□□□□ 0.88
SKP1-206ENST00000519321 SLC35A3Q9Y2D2 325 aa20.53■□□□□ 0.88
SKP1-206ENST00000519321 AGAP5A6NIR3 686 aa20.52■□□□□ 0.88
SKP1-206ENST00000519321 C17orf51A8MQB3 221 aa20.52■□□□□ 0.88
SKP1-206ENST00000519321 LINC01387J3KSC0 135 aa20.52■□□□□ 0.88
SKP1-206ENST00000519321 ZNF264O43296 627 aa20.52■□□□□ 0.88
SKP1-206ENST00000519321 DBIP07108 87 aaKnown RBP20.52■□□□□ 0.88
SKP1-206ENST00000519321 HK1P19367 917 aa20.52■□□□□ 0.88
SKP1-206ENST00000519321 P2RX1P51575 399 aa20.52■□□□□ 0.88
SKP1-206ENST00000519321 FGFBP1Q14512 234 aa20.52■□□□□ 0.88
SKP1-206ENST00000519321 CMIPQ8IY22 773 aa20.52■□□□□ 0.88
SKP1-206ENST00000519321 ANKS4BQ8N8V4 417 aa20.52■□□□□ 0.88
SKP1-206ENST00000519321 TOR1AIP2Q8NFQ8 470 aa20.52■□□□□ 0.88
SKP1-206ENST00000519321 RELTQ969Z4 430 aa20.52■□□□□ 0.88
SKP1-206ENST00000519321 TMEM19Q96HH6 336 aa20.52■□□□□ 0.88
SKP1-206ENST00000519321 SH3YL1Q96HL8 342 aaPredicted RBP20.52■□□□□ 0.88
SKP1-206ENST00000519321 IKZF5Q9H5V7 419 aa20.52■□□□□ 0.88
SKP1-206ENST00000519321 RUBCNLQ9H714 662 aa20.52■□□□□ 0.88
SKP1-206ENST00000519321 BCL2L10Q9HD36 194 aa20.52■□□□□ 0.88
SKP1-206ENST00000519321 SPRR3Q9UBC9 169 aa20.52■□□□□ 0.88
SKP1-206ENST00000519321 SLC5A6Q9Y289 635 aa20.52■□□□□ 0.88
SKP1-206ENST00000519321 POLEQ07864 2286 aa20.52■□□□□ 0.88
SKP1-206ENST00000519321 B4DXG7 233 aa20.51■□□□□ 0.87
SKP1-206ENST00000519321 ZIC3O60481 467 aa20.51■□□□□ 0.87
SKP1-206ENST00000519321 CSTAP01040 98 aa20.51■□□□□ 0.87
SKP1-206ENST00000519321 NUDT7P0C024 238 aa20.51■□□□□ 0.87
SKP1-206ENST00000519321 ARAFP10398 606 aa20.51■□□□□ 0.87
SKP1-206ENST00000519321 IL7RP16871 459 aa20.51■□□□□ 0.87
SKP1-206ENST00000519321 CHMP24386 653 aa20.51■□□□□ 0.87
SKP1-206ENST00000519321 PRDX6P30041 224 aa20.51■□□□□ 0.87
SKP1-206ENST00000519321 ZNF41P51814 821 aaPredicted RBP20.51■□□□□ 0.87
SKP1-206ENST00000519321 ZNF117Q03924 483 aa20.51■□□□□ 0.87
SKP1-206ENST00000519321 RBBP4Q09028 425 aa20.51■□□□□ 0.87
SKP1-206ENST00000519321 MAPK11Q15759 364 aa20.51■□□□□ 0.87
SKP1-206ENST00000519321 MAPK14Q16539 360 aa20.51■□□□□ 0.87
SKP1-206ENST00000519321 C3AR1Q16581 482 aa20.51■□□□□ 0.87
SKP1-206ENST00000519321 ZSWIM7Q19AV6 140 aa20.51■□□□□ 0.87
SKP1-206ENST00000519321 VASNQ6EMK4 673 aa20.51■□□□□ 0.87
SKP1-206ENST00000519321 ENPP6Q6UWR7 440 aa20.51■□□□□ 0.87
SKP1-206ENST00000519321 CD163Q86VB7 1156 aa20.51■□□□□ 0.87
SKP1-206ENST00000519321 OR8J3Q8NGG0 315 aa20.51■□□□□ 0.87
SKP1-206ENST00000519321 BBS10Q8TAM1 723 aa20.51■□□□□ 0.87
SKP1-206ENST00000519321 WDR60Q8WVS4 1066 aa20.51■□□□□ 0.87
SKP1-206ENST00000519321 ABTB1Q969K4 478 aaPredicted RBP20.51■□□□□ 0.87
SKP1-206ENST00000519321 SFXN2Q96NB2 322 aa20.51■□□□□ 0.87
SKP1-206ENST00000519321 LRRC37BQ96QE4 947 aa20.51■□□□□ 0.87
SKP1-206ENST00000519321 TREX2Q9BQ50 279 aaPredicted RBP20.51■□□□□ 0.87
SKP1-206ENST00000519321 PIGQQ9BRB3 760 aa20.51■□□□□ 0.87
SKP1-206ENST00000519321 LAT2Q9GZY6 243 aa20.51■□□□□ 0.87
SKP1-206ENST00000519321 TP63Q9H3D4 680 aaPredicted RBP20.51■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms