RNA–Protein interactions for RNA: ENST00000517238.1

SNORA40.16-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 121 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.16-201ENST00000517238 PGLSO95336 258 aa-2□□□□□ -2.73
SNORA40.16-201ENST00000517238 H6PDO95479 791 aa-2□□□□□ -2.73
SNORA40.16-201ENST00000517238 NPPAP01160 153 aa-2□□□□□ -2.73
SNORA40.16-201ENST00000517238 ZNF735P0CB33 412 aa-2□□□□□ -2.73
SNORA40.16-201ENST00000517238 IGHV1-8P0DP01 117 aa-2□□□□□ -2.73
SNORA40.16-201ENST00000517238 BDNFP23560 247 aa-2□□□□□ -2.73
SNORA40.16-201ENST00000517238 AQP1P29972 269 aa-2□□□□□ -2.73
SNORA40.16-201ENST00000517238 RPL13AP40429 203 aaKnown RBP-2□□□□□ -2.73
SNORA40.16-201ENST00000517238 CSNK1A1P48729 337 aa-2□□□□□ -2.73
SNORA40.16-201ENST00000517238 STK19P49842 368 aaPredicted RBP-2□□□□□ -2.73
SNORA40.16-201ENST00000517238 ARFIP1P53367 373 aa-2□□□□□ -2.73
SNORA40.16-201ENST00000517238 HCCSP53701 268 aa-2□□□□□ -2.73
SNORA40.16-201ENST00000517238 CLDN17P56750 224 aa-2□□□□□ -2.73
SNORA40.16-201ENST00000517238 UFM1P61960 85 aa-2□□□□□ -2.73
SNORA40.16-201ENST00000517238 KLRC3Q07444 240 aa-2□□□□□ -2.73
SNORA40.16-201ENST00000517238 SNTB2Q13425 540 aaKnown RBP-2□□□□□ -2.73
SNORA40.16-201ENST00000517238 VEZF1Q14119 521 aa-2□□□□□ -2.73
SNORA40.16-201ENST00000517238 GK2Q14410 553 aaPredicted RBP-2□□□□□ -2.73
SNORA40.16-201ENST00000517238 MAPK11Q15759 364 aa-2□□□□□ -2.73
SNORA40.16-201ENST00000517238 RFX4Q33E94 735 aa-2□□□□□ -2.73
SNORA40.16-201ENST00000517238 GPAT3Q53EU6 434 aa-2□□□□□ -2.73
SNORA40.16-201ENST00000517238 APOBEC3HQ6NTF7 200 aaKnown RBP-2□□□□□ -2.73
SNORA40.16-201ENST00000517238 SLC22A25Q6T423 547 aa-2□□□□□ -2.73
SNORA40.16-201ENST00000517238 C15orf52Q6ZUT6 534 aaKnown RBP-2□□□□□ -2.73
SNORA40.16-201ENST00000517238 ZNF283Q8N7M2 679 aa-2□□□□□ -2.73
SNORA40.16-201ENST00000517238 SIDT2Q8NBJ9 832 aaKnown RBP-2□□□□□ -2.73
SNORA40.16-201ENST00000517238 CCDC54Q8NEL0 328 aa-2□□□□□ -2.73
SNORA40.16-201ENST00000517238 GPR148Q8TDV2 347 aa-2□□□□□ -2.73
SNORA40.16-201ENST00000517238 SMPDL3AQ92484 453 aa-2□□□□□ -2.73
SNORA40.16-201ENST00000517238 C18orf25Q96B23 403 aaPredicted RBP-2□□□□□ -2.73
SNORA40.16-201ENST00000517238 PRKRIP1Q9H875 184 aaPredicted RBP-2□□□□□ -2.73
SNORA40.16-201ENST00000517238 STARD7Q9NQZ5 370 aa-2□□□□□ -2.73
SNORA40.16-201ENST00000517238 SMC4Q9NTJ3 1288 aa-2□□□□□ -2.73
SNORA40.16-201ENST00000517238 DDX28Q9NUL7 540 aaKnown RBP-2□□□□□ -2.73
SNORA40.16-201ENST00000517238 MRGBPQ9NV56 204 aa-2□□□□□ -2.73
SNORA40.16-201ENST00000517238 MED17Q9NVC6 651 aa-2□□□□□ -2.73
SNORA40.16-201ENST00000517238 OR1A1Q9P1Q5 309 aa-2□□□□□ -2.73
SNORA40.16-201ENST00000517238 VPS18Q9P253 973 aa-2□□□□□ -2.73
SNORA40.16-201ENST00000517238 SUCLA2Q9P2R7 463 aaPredicted RBP-2□□□□□ -2.73
SNORA40.16-201ENST00000517238 RIMS3Q9UJD0 308 aa-2□□□□□ -2.73
SNORA40.16-201ENST00000517238 FBXO2Q9UK22 296 aaPredicted RBP-2□□□□□ -2.73
SNORA40.16-201ENST00000517238 CELSR2Q9HCU4 2923 aa-2□□□□□ -2.73
SNORA40.16-201ENST00000517238 ANKUB1A6NFN9 424 aa-2.01□□□□□ -2.73
SNORA40.16-201ENST00000517238 F5H0A9 414 aaPredicted RBP-2.01□□□□□ -2.73
SNORA40.16-201ENST00000517238 G3V3Q6 166 aa-2.01□□□□□ -2.73
SNORA40.16-201ENST00000517238 MEIS2O14770 477 aa-2.01□□□□□ -2.73
SNORA40.16-201ENST00000517238 HS6ST1O60243 411 aa-2.01□□□□□ -2.73
SNORA40.16-201ENST00000517238 PARNO95453 639 aaKnown RBP-2.01□□□□□ -2.73
SNORA40.16-201ENST00000517238 SLC35G6P0C7Q6 338 aa-2.01□□□□□ -2.73
SNORA40.16-201ENST00000517238 ZNF705DP0CH99 300 aaPredicted RBP-2.01□□□□□ -2.73
SNORA40.16-201ENST00000517238 ZNF705BP0CI00 300 aaPredicted RBP-2.01□□□□□ -2.73
SNORA40.16-201ENST00000517238 IFITM1P13164 125 aa-2.01□□□□□ -2.73
SNORA40.16-201ENST00000517238 ICAM2P13598 275 aa-2.01□□□□□ -2.73
SNORA40.16-201ENST00000517238 COX7A2P14406 83 aa-2.01□□□□□ -2.73
SNORA40.16-201ENST00000517238 IL1RNP18510 177 aa-2.01□□□□□ -2.73
SNORA40.16-201ENST00000517238 CPT2P23786 658 aa-2.01□□□□□ -2.73
SNORA40.16-201ENST00000517238 EPS15P42566 896 aa-2.01□□□□□ -2.73
SNORA40.16-201ENST00000517238 GALR1P47211 349 aa-2.01□□□□□ -2.73
SNORA40.16-201ENST00000517238 SLC6A8P48029 635 aa-2.01□□□□□ -2.73
SNORA40.16-201ENST00000517238 HSPA7P48741 367 aa-2.01□□□□□ -2.73
SNORA40.16-201ENST00000517238 CASP6P55212 293 aa-2.01□□□□□ -2.73
SNORA40.16-201ENST00000517238 WASHC5Q12768 1159 aa-2.01□□□□□ -2.73
SNORA40.16-201ENST00000517238 SPARCL1Q14515 664 aa-2.01□□□□□ -2.73
SNORA40.16-201ENST00000517238 CHRNA6Q15825 494 aa-2.01□□□□□ -2.73
SNORA40.16-201ENST00000517238 LRRC10Q5BKY1 277 aa-2.01□□□□□ -2.73
SNORA40.16-201ENST00000517238 TMEM69Q5SWH9 247 aa-2.01□□□□□ -2.73
SNORA40.16-201ENST00000517238 MEDAGQ5VYS4 303 aa-2.01□□□□□ -2.73
SNORA40.16-201ENST00000517238 GGT6Q6P531 493 aa-2.01□□□□□ -2.73
SNORA40.16-201ENST00000517238 DNM1P46Q6ZS02 220 aa-2.01□□□□□ -2.73
SNORA40.16-201ENST00000517238 RFLNAQ6ZTI6 216 aa-2.01□□□□□ -2.73
SNORA40.16-201ENST00000517238 RFPL4BQ6ZWI9 263 aa-2.01□□□□□ -2.73
SNORA40.16-201ENST00000517238 SCXQ7RTU7 201 aa-2.01□□□□□ -2.73
SNORA40.16-201ENST00000517238 MAATS1Q7Z4T9 603 aa-2.01□□□□□ -2.73
SNORA40.16-201ENST00000517238 TPH2Q8IWU9 490 aa-2.01□□□□□ -2.73
SNORA40.16-201ENST00000517238 CCAR2Q8N163 923 aaKnown RBP-2.01□□□□□ -2.73
SNORA40.16-201ENST00000517238 EXOC3-AS1Q8N2X6 119 aa-2.01□□□□□ -2.73
SNORA40.16-201ENST00000517238 SLC43A2Q8N370 569 aa-2.01□□□□□ -2.73
SNORA40.16-201ENST00000517238 OR4F5Q8NH21 305 aa-2.01□□□□□ -2.73
SNORA40.16-201ENST00000517238 C8orf46Q8TAG6 207 aa-2.01□□□□□ -2.73
SNORA40.16-201ENST00000517238 RNF133Q8WVZ7 376 aa-2.01□□□□□ -2.73
SNORA40.16-201ENST00000517238 IL1F10Q8WWZ1 152 aa-2.01□□□□□ -2.73
SNORA40.16-201ENST00000517238 SHC3Q92529 594 aa-2.01□□□□□ -2.73
SNORA40.16-201ENST00000517238 PSMG2Q969U7 264 aa-2.01□□□□□ -2.73
SNORA40.16-201ENST00000517238 SLC25A46Q96AG3 418 aa-2.01□□□□□ -2.73
SNORA40.16-201ENST00000517238 CHMP4CQ96CF2 233 aa-2.01□□□□□ -2.73
SNORA40.16-201ENST00000517238 EID2BQ96D98 161 aa-2.01□□□□□ -2.73
SNORA40.16-201ENST00000517238 C12orf42Q96LP6 360 aa-2.01□□□□□ -2.73
SNORA40.16-201ENST00000517238 MAGT1Q9H0U3 335 aa-2.01□□□□□ -2.73
SNORA40.16-201ENST00000517238 ABCG8Q9H221 673 aa-2.01□□□□□ -2.73
SNORA40.16-201ENST00000517238 ISYNA1Q9NPH2 558 aa-2.01□□□□□ -2.73
SNORA40.16-201ENST00000517238 C5AR2Q9P296 337 aa-2.01□□□□□ -2.73
SNORA40.16-201ENST00000517238 DCDC2Q9UHG0 476 aa-2.01□□□□□ -2.73
SNORA40.16-201ENST00000517238 MAD1L1Q9Y6D9 718 aa-2.01□□□□□ -2.73
SNORA40.16-201ENST00000517238 FASNP49327 2511 aaKnown RBP-2.02□□□□□ -2.73
SNORA40.16-201ENST00000517238 IGKV1-12A0A0C4DH73 117 aa-2.02□□□□□ -2.73
SNORA40.16-201ENST00000517238 MBLAC1A4D2B0 266 aaPredicted RBP-2.02□□□□□ -2.73
SNORA40.16-201ENST00000517238 KNCNA6PVL3 124 aa-2.02□□□□□ -2.73
SNORA40.16-201ENST00000517238 C19orf81C9J6K1 198 aa-2.02□□□□□ -2.73
SNORA40.16-201ENST00000517238 H3BMM5 538 aa-2.02□□□□□ -2.73
SNORA40.16-201ENST00000517238 MLNRO43193 412 aa-2.02□□□□□ -2.73
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms