RNA–Protein interactions for RNA: ENST00000516991.1

SCARNA20.5-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 142 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.5-201ENST00000516991 MFSD12Q6NUT3 480 aa13.07□□□□□ -0.32
SCARNA20.5-201ENST00000516991 GTF2IRD2Q86UP8 949 aa13.07□□□□□ -0.32
SCARNA20.5-201ENST00000516991 EXOC3L1Q86VI1 746 aa13.07□□□□□ -0.32
SCARNA20.5-201ENST00000516991 CIARTQ8N365 385 aaPredicted RBP13.07□□□□□ -0.32
SCARNA20.5-201ENST00000516991 CCDC63Q8NA47 563 aa13.07□□□□□ -0.32
SCARNA20.5-201ENST00000516991 OR4C3Q8NH37 302 aa13.07□□□□□ -0.32
SCARNA20.5-201ENST00000516991 FAM110BQ8TC76 370 aa13.07□□□□□ -0.32
SCARNA20.5-201ENST00000516991 IGFBPL1Q8WX77 278 aa13.07□□□□□ -0.32
SCARNA20.5-201ENST00000516991 CIDECQ96AQ7 238 aaPredicted RBP13.07□□□□□ -0.32
SCARNA20.5-201ENST00000516991 MTERF3Q96E29 417 aa13.07□□□□□ -0.32
SCARNA20.5-201ENST00000516991 RNF145Q96MT1 663 aa13.07□□□□□ -0.32
SCARNA20.5-201ENST00000516991 TRMOQ9BU70 441 aa13.07□□□□□ -0.32
SCARNA20.5-201ENST00000516991 ACTR6Q9GZN1 396 aa13.07□□□□□ -0.32
SCARNA20.5-201ENST00000516991 TNFRSF12AQ9NP84 129 aa13.07□□□□□ -0.32
SCARNA20.5-201ENST00000516991 OXSMQ9NWU1 459 aa13.07□□□□□ -0.32
SCARNA20.5-201ENST00000516991 CLEC4AQ9UMR7 237 aa13.07□□□□□ -0.32
SCARNA20.5-201ENST00000516991 GPR52Q9Y2T5 361 aa13.07□□□□□ -0.32
SCARNA20.5-201ENST00000516991 TMED5Q9Y3A6 229 aa13.07□□□□□ -0.32
SCARNA20.5-201ENST00000516991 GIMAP1-GIMAP5A0A087WTJ2 511 aa13.06□□□□□ -0.32
SCARNA20.5-201ENST00000516991 A0A1W2PPM1 405 aa13.06□□□□□ -0.32
SCARNA20.5-201ENST00000516991 TNFSF11O14788 317 aa13.06□□□□□ -0.32
SCARNA20.5-201ENST00000516991 HS3ST1O14792 307 aa13.06□□□□□ -0.32
SCARNA20.5-201ENST00000516991 AZIN1O14977 448 aa13.06□□□□□ -0.32
SCARNA20.5-201ENST00000516991 SMAD7O15105 426 aaKnown RBP13.06□□□□□ -0.32
SCARNA20.5-201ENST00000516991 KLF4O43474 513 aa13.06□□□□□ -0.32
SCARNA20.5-201ENST00000516991 KCNK2O95069 426 aa13.06□□□□□ -0.32
SCARNA20.5-201ENST00000516991 ALOX5P09917 674 aa13.06□□□□□ -0.32
SCARNA20.5-201ENST00000516991 PSMA4P25789 261 aaKnown RBP13.06□□□□□ -0.32
SCARNA20.5-201ENST00000516991 AGTR1P30556 359 aa13.06□□□□□ -0.32
SCARNA20.5-201ENST00000516991 EIF1P41567 113 aaKnown RBP13.06□□□□□ -0.32
SCARNA20.5-201ENST00000516991 PPP2R2BQ00005 443 aa13.06□□□□□ -0.32
SCARNA20.5-201ENST00000516991 DUSP5Q16690 384 aa13.06□□□□□ -0.32
SCARNA20.5-201ENST00000516991 ZNF385BQ569K4 471 aa13.06□□□□□ -0.32
SCARNA20.5-201ENST00000516991 HBMQ6B0K9 141 aa13.06□□□□□ -0.32
SCARNA20.5-201ENST00000516991 CLEC6AQ6EIG7 209 aa13.06□□□□□ -0.32
SCARNA20.5-201ENST00000516991 ANKRD26P1Q6NSI1 321 aa13.06□□□□□ -0.32
SCARNA20.5-201ENST00000516991 FIGNL1Q6PIW4 674 aa13.06□□□□□ -0.32
SCARNA20.5-201ENST00000516991 SH2D5Q6ZV89 423 aa13.06□□□□□ -0.32
SCARNA20.5-201ENST00000516991 R3HCC1LQ7Z5L2 792 aaKnown RBP13.06□□□□□ -0.32
SCARNA20.5-201ENST00000516991 GALNT10Q86SR1 603 aa13.06□□□□□ -0.32
SCARNA20.5-201ENST00000516991 TRABD2AQ86V40 505 aa13.06□□□□□ -0.32
SCARNA20.5-201ENST00000516991 ZNF611Q8N823 705 aa13.06□□□□□ -0.32
SCARNA20.5-201ENST00000516991 COX18Q8N8Q8 333 aa13.06□□□□□ -0.32
SCARNA20.5-201ENST00000516991 GATSQ8NAP1 163 aa13.06□□□□□ -0.32
SCARNA20.5-201ENST00000516991 STEAP2Q8NFT2 490 aa13.06□□□□□ -0.32
SCARNA20.5-201ENST00000516991 FBXO30Q8TB52 745 aa13.06□□□□□ -0.32
SCARNA20.5-201ENST00000516991 GIMAP5Q96F15 307 aa13.06□□□□□ -0.32
SCARNA20.5-201ENST00000516991 KLHL15Q96M94 604 aa13.06□□□□□ -0.32
SCARNA20.5-201ENST00000516991 TSSK3Q96PN8 268 aa13.06□□□□□ -0.32
SCARNA20.5-201ENST00000516991 ZNF701Q9NV72 531 aaPredicted RBP13.06□□□□□ -0.32
SCARNA20.5-201ENST00000516991 SH3BP4Q9P0V3 963 aa13.06□□□□□ -0.32
SCARNA20.5-201ENST00000516991 USF3Q68DE3 2245 aa13.06□□□□□ -0.32
SCARNA20.5-201ENST00000516991 TRIM64A6NGJ6 449 aa13.05□□□□□ -0.32
SCARNA20.5-201ENST00000516991 TRIM64BA6NI03 449 aa13.05□□□□□ -0.32
SCARNA20.5-201ENST00000516991 COPEO14579 308 aa13.05□□□□□ -0.32
SCARNA20.5-201ENST00000516991 AKAP10O43572 662 aa13.05□□□□□ -0.32
SCARNA20.5-201ENST00000516991 CNOT4O95628 575 aaKnown RBP13.05□□□□□ -0.32
SCARNA20.5-201ENST00000516991 FAM153BP0C7A2 387 aa13.05□□□□□ -0.32
SCARNA20.5-201ENST00000516991 HPCAL1P37235 193 aa13.05□□□□□ -0.32
SCARNA20.5-201ENST00000516991 SUMO3P55854 103 aaPredicted RBP13.05□□□□□ -0.32
SCARNA20.5-201ENST00000516991 RPL38P63173 70 aaKnown RBP13.05□□□□□ -0.32
SCARNA20.5-201ENST00000516991 POU6F2P78424 691 aaPredicted RBP13.05□□□□□ -0.32
SCARNA20.5-201ENST00000516991 MLC1Q15049 377 aa13.05□□□□□ -0.32
SCARNA20.5-201ENST00000516991 FAM153CQ494X1 144 aa13.05□□□□□ -0.32
SCARNA20.5-201ENST00000516991 LRIG3Q6UXM1 1119 aa13.05□□□□□ -0.32
SCARNA20.5-201ENST00000516991 C22orf34Q6ZV56 151 aa13.05□□□□□ -0.32
SCARNA20.5-201ENST00000516991 MTERF4Q7Z6M4 381 aaKnown RBP13.05□□□□□ -0.32
SCARNA20.5-201ENST00000516991 TDRPQ86YL5 185 aa13.05□□□□□ -0.32
SCARNA20.5-201ENST00000516991 WFDC8Q8IUA0 241 aa13.05□□□□□ -0.32
SCARNA20.5-201ENST00000516991 ZNF527Q8NB42 609 aa13.05□□□□□ -0.32
SCARNA20.5-201ENST00000516991 SLC16A11Q8NCK7 471 aa13.05□□□□□ -0.32
SCARNA20.5-201ENST00000516991 B4GALNT2Q8NHY0 566 aa13.05□□□□□ -0.32
SCARNA20.5-201ENST00000516991 JADE3Q92613 823 aa13.05□□□□□ -0.32
SCARNA20.5-201ENST00000516991 CPNE4Q96A23 557 aaPredicted RBP13.05□□□□□ -0.32
SCARNA20.5-201ENST00000516991 PLPPR2Q96GM1 343 aa13.05□□□□□ -0.32
SCARNA20.5-201ENST00000516991 SH3YL1Q96HL8 342 aaPredicted RBP13.05□□□□□ -0.32
SCARNA20.5-201ENST00000516991 REXO5Q96IC2 774 aaKnown RBP13.05□□□□□ -0.32
SCARNA20.5-201ENST00000516991 TACO1Q9BSH4 297 aaKnown RBP13.05□□□□□ -0.32
SCARNA20.5-201ENST00000516991 TMEM204Q9BSN7 226 aa13.05□□□□□ -0.32
SCARNA20.5-201ENST00000516991 BTBD2Q9BX70 525 aa13.05□□□□□ -0.32
SCARNA20.5-201ENST00000516991 GP6Q9HCN6 339 aa13.05□□□□□ -0.32
SCARNA20.5-201ENST00000516991 TIGARQ9NQ88 270 aa13.05□□□□□ -0.32
SCARNA20.5-201ENST00000516991 DUSP22Q9NRW4 184 aa13.05□□□□□ -0.32
SCARNA20.5-201ENST00000516991 SNX8Q9Y5X2 465 aa13.05□□□□□ -0.32
SCARNA20.5-201ENST00000516991 PTGDR2Q9Y5Y4 395 aa13.05□□□□□ -0.32
SCARNA20.5-201ENST00000516991 ZANQ9Y493 2812 aa13.04□□□□□ -0.32
SCARNA20.5-201ENST00000516991 A0A0J9YW62 118 aa13.04□□□□□ -0.32
SCARNA20.5-201ENST00000516991 GJE1A6NN92 205 aa13.04□□□□□ -0.32
SCARNA20.5-201ENST00000516991 SOX30O94993 753 aa13.04□□□□□ -0.32
SCARNA20.5-201ENST00000516991 KRT16P08779 473 aa13.04□□□□□ -0.32
SCARNA20.5-201ENST00000516991 PCSK6P29122 969 aa13.04□□□□□ -0.32
SCARNA20.5-201ENST00000516991 RPL3P39023 403 aaKnown RBP13.04□□□□□ -0.32
SCARNA20.5-201ENST00000516991 RNPS1Q15287 305 aaKnown RBP13.04□□□□□ -0.32
SCARNA20.5-201ENST00000516991 ZNF239Q16600 458 aaKnown RBP13.04□□□□□ -0.32
SCARNA20.5-201ENST00000516991 EXOSC6Q5RKV6 272 aaKnown RBP13.04□□□□□ -0.32
SCARNA20.5-201ENST00000516991 Q6ZSR9 355 aa13.04□□□□□ -0.32
SCARNA20.5-201ENST00000516991 ZAR1Q86SH2 424 aa13.04□□□□□ -0.32
SCARNA20.5-201ENST00000516991 OR2T11Q8NH01 316 aa13.04□□□□□ -0.32
SCARNA20.5-201ENST00000516991 KIF18AQ8NI77 898 aa13.04□□□□□ -0.32
SCARNA20.5-201ENST00000516991 RNF128Q8TEB7 428 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms