RNA–Protein interactions for RNA: ENST00000515516.1

TCOF1-215, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 661 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-215ENST00000515516 G6PDP11413 515 aa12.3□□□□□ -0.44
TCOF1-215ENST00000515516 POU2F1P14859 743 aa12.3□□□□□ -0.44
TCOF1-215ENST00000515516 SOAT1P35610 550 aa12.3□□□□□ -0.44
TCOF1-215ENST00000515516 ETV4P43268 484 aa12.3□□□□□ -0.44
TCOF1-215ENST00000515516 KIR2DL2P43627 348 aaPredicted RBP12.3□□□□□ -0.44
TCOF1-215ENST00000515516 ABCE1P61221 599 aaKnown RBP12.3□□□□□ -0.44
TCOF1-215ENST00000515516 EMX2Q04743 252 aa12.3□□□□□ -0.44
TCOF1-215ENST00000515516 KEAP1Q14145 624 aa12.3□□□□□ -0.44
TCOF1-215ENST00000515516 PDCD2Q16342 344 aaPredicted RBP12.3□□□□□ -0.44
TCOF1-215ENST00000515516 TMEM44Q2T9K0 475 aa12.3□□□□□ -0.44
TCOF1-215ENST00000515516 SMU1Q2TAY7 513 aa12.3□□□□□ -0.44
TCOF1-215ENST00000515516 VWA1Q6PCB0 445 aa12.3□□□□□ -0.44
TCOF1-215ENST00000515516 BTLAQ7Z6A9 289 aa12.3□□□□□ -0.44
TCOF1-215ENST00000515516 MTERF4Q7Z6M4 381 aaKnown RBP12.3□□□□□ -0.44
TCOF1-215ENST00000515516 CROCCP2Q86T23 111 aa12.3□□□□□ -0.44
TCOF1-215ENST00000515516 KIRREL3Q8IZU9 778 aa12.3□□□□□ -0.44
TCOF1-215ENST00000515516 GTPBP8Q8N3Z3 284 aaPredicted RBP12.3□□□□□ -0.44
TCOF1-215ENST00000515516 KRTCAP2Q8N6L1 136 aa12.3□□□□□ -0.44
TCOF1-215ENST00000515516 PHOSPHO1Q8TCT1 267 aa12.3□□□□□ -0.44
TCOF1-215ENST00000515516 SFXN5Q8TD22 340 aa12.3□□□□□ -0.44
TCOF1-215ENST00000515516 PKNOX2Q96KN3 472 aa12.3□□□□□ -0.44
TCOF1-215ENST00000515516 ZIM3Q96PE6 472 aa12.3□□□□□ -0.44
TCOF1-215ENST00000515516 PARD6BQ9BYG5 372 aa12.3□□□□□ -0.44
TCOF1-215ENST00000515516 LIME1Q9H400 295 aa12.3□□□□□ -0.44
TCOF1-215ENST00000515516 CXorf36Q9H7Y0 433 aa12.3□□□□□ -0.44
TCOF1-215ENST00000515516 RNF122Q9H9V4 155 aa12.3□□□□□ -0.44
TCOF1-215ENST00000515516 KCNK9Q9NPC2 374 aa12.3□□□□□ -0.44
TCOF1-215ENST00000515516 MED17Q9NVC6 651 aa12.3□□□□□ -0.44
TCOF1-215ENST00000515516 ZNF226Q9NYT6 803 aa12.3□□□□□ -0.44
TCOF1-215ENST00000515516 MCTS1Q9ULC4 181 aaKnown RBP12.3□□□□□ -0.44
TCOF1-215ENST00000515516 PCDHGB4Q9UN71 923 aa12.3□□□□□ -0.44
TCOF1-215ENST00000515516 PROCRQ9UNN8 238 aa12.3□□□□□ -0.44
TCOF1-215ENST00000515516 EMC9Q9Y3B6 208 aa12.3□□□□□ -0.44
TCOF1-215ENST00000515516 CCDC168Q8NDH2 2452 aa12.3□□□□□ -0.44
TCOF1-215ENST00000515516 TACC2O95359 2948 aa12.29□□□□□ -0.44
TCOF1-215ENST00000515516 GTPBP1O00178 669 aaKnown RBP12.29□□□□□ -0.44
TCOF1-215ENST00000515516 NUDT14O95848 222 aa12.29□□□□□ -0.44
TCOF1-215ENST00000515516 RAF1P04049 648 aa12.29□□□□□ -0.44
TCOF1-215ENST00000515516 ARRB2P32121 409 aa12.29□□□□□ -0.44
TCOF1-215ENST00000515516 CD79BP40259 229 aa12.29□□□□□ -0.44
TCOF1-215ENST00000515516 EIF1P41567 113 aaKnown RBP12.29□□□□□ -0.44
TCOF1-215ENST00000515516 PCYT1AP49585 367 aa12.29□□□□□ -0.44
TCOF1-215ENST00000515516 CTBP2P56545 445 aa12.29□□□□□ -0.44
TCOF1-215ENST00000515516 CLDN8P56748 225 aa12.29□□□□□ -0.44
TCOF1-215ENST00000515516 RIPPLY3P57055 190 aa12.29□□□□□ -0.44
TCOF1-215ENST00000515516 RAC1P63000 192 aa12.29□□□□□ -0.44
TCOF1-215ENST00000515516 PPP2R2AP63151 447 aa12.29□□□□□ -0.44
TCOF1-215ENST00000515516 ZNF844Q08AG5 666 aa12.29□□□□□ -0.44
TCOF1-215ENST00000515516 FAM27E3Q08E93 113 aa12.29□□□□□ -0.44
TCOF1-215ENST00000515516 POU4F3Q15319 338 aa12.29□□□□□ -0.44
TCOF1-215ENST00000515516 PLPPR5Q32ZL2 321 aa12.29□□□□□ -0.44
TCOF1-215ENST00000515516 GTF2IRD2BQ6EKJ0 949 aa12.29□□□□□ -0.44
TCOF1-215ENST00000515516 PAMR1Q6UXH9 720 aa12.29□□□□□ -0.44
TCOF1-215ENST00000515516 FAM214BQ7L5A3 538 aa12.29□□□□□ -0.44
TCOF1-215ENST00000515516 ZAR1Q86SH2 424 aa12.29□□□□□ -0.44
TCOF1-215ENST00000515516 GTF2IRD2Q86UP8 949 aa12.29□□□□□ -0.44
TCOF1-215ENST00000515516 PSMA8Q8TAA3 256 aa12.29□□□□□ -0.44
TCOF1-215ENST00000515516 PPP1R36Q96LQ0 422 aa12.29□□□□□ -0.44
TCOF1-215ENST00000515516 RNF145Q96MT1 663 aa12.29□□□□□ -0.44
TCOF1-215ENST00000515516 MED18Q9BUE0 208 aa12.29□□□□□ -0.44
TCOF1-215ENST00000515516 OPN3Q9H1Y3 402 aaPredicted RBP12.29□□□□□ -0.44
TCOF1-215ENST00000515516 SSU72Q9NP77 194 aaKnown RBP12.29□□□□□ -0.44
TCOF1-215ENST00000515516 FANCFQ9NPI8 374 aa12.29□□□□□ -0.44
TCOF1-215ENST00000515516 FBXO34Q9NWN3 711 aa12.29□□□□□ -0.44
TCOF1-215ENST00000515516 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.29□□□□□ -0.44
TCOF1-215ENST00000515516 RAP2CQ9Y3L5 183 aa12.29□□□□□ -0.44
TCOF1-215ENST00000515516 EXPH5Q8NEV8 1989 aa12.29□□□□□ -0.44
TCOF1-215ENST00000515516 C7orf72A4D263 438 aa12.28□□□□□ -0.44
TCOF1-215ENST00000515516 DUXAA6NLW8 204 aa12.28□□□□□ -0.44
TCOF1-215ENST00000515516 C16orf97H3BN30 126 aa12.28□□□□□ -0.44
TCOF1-215ENST00000515516 ITM2AO43736 263 aa12.28□□□□□ -0.44
TCOF1-215ENST00000515516 OPN1LWP04000 364 aa12.28□□□□□ -0.44
TCOF1-215ENST00000515516 TUBBP07437 444 aa12.28□□□□□ -0.44
TCOF1-215ENST00000515516 CD8BP10966 210 aa12.28□□□□□ -0.44
TCOF1-215ENST00000515516 CD99P14209 185 aa12.28□□□□□ -0.44
TCOF1-215ENST00000515516 SLC1A6P48664 564 aa12.28□□□□□ -0.44
TCOF1-215ENST00000515516 RPL14P50914 215 aaKnown RBP12.28□□□□□ -0.44
TCOF1-215ENST00000515516 EXOSC6Q5RKV6 272 aaKnown RBP12.28□□□□□ -0.44
TCOF1-215ENST00000515516 CEP85LQ5SZL2 805 aa12.28□□□□□ -0.44
TCOF1-215ENST00000515516 DCST2Q5T1A1 773 aa12.28□□□□□ -0.44
TCOF1-215ENST00000515516 HBMQ6B0K9 141 aa12.28□□□□□ -0.44
TCOF1-215ENST00000515516 ESPNLQ6ZVH7 1005 aa12.28□□□□□ -0.44
TCOF1-215ENST00000515516 GGNQ86UU5 652 aa12.28□□□□□ -0.44
TCOF1-215ENST00000515516 RIMKLAQ8IXN7 391 aa12.28□□□□□ -0.44
TCOF1-215ENST00000515516 ZNF781Q8N8C0 355 aa12.28□□□□□ -0.44
TCOF1-215ENST00000515516 VPS37AQ8NEZ2 397 aa12.28□□□□□ -0.44
TCOF1-215ENST00000515516 OR10D3Q8NH80 312 aa12.28□□□□□ -0.44
TCOF1-215ENST00000515516 OR5AK3PQ8NH89 298 aa12.28□□□□□ -0.44
TCOF1-215ENST00000515516 OR2V1Q8NHB1 315 aa12.28□□□□□ -0.44
TCOF1-215ENST00000515516 REXO5Q96IC2 774 aaKnown RBP12.28□□□□□ -0.44
TCOF1-215ENST00000515516 PAIP2Q9BPZ3 127 aaKnown RBP12.28□□□□□ -0.44
TCOF1-215ENST00000515516 DPY30Q9C005 99 aa12.28□□□□□ -0.44
TCOF1-215ENST00000515516 CXXC4Q9H2H0 198 aa12.28□□□□□ -0.44
TCOF1-215ENST00000515516 AKTIPQ9H8T0 292 aa12.28□□□□□ -0.44
TCOF1-215ENST00000515516 TIGARQ9NQ88 270 aa12.28□□□□□ -0.44
TCOF1-215ENST00000515516 GLRX2Q9NS18 164 aa12.28□□□□□ -0.44
TCOF1-215ENST00000515516 GPATCH2Q9NW75 528 aa12.28□□□□□ -0.44
TCOF1-215ENST00000515516 ASIC5Q9NY37 505 aa12.28□□□□□ -0.44
TCOF1-215ENST00000515516 AKAP9Q99996 3911 aa12.28□□□□□ -0.44
TCOF1-215ENST00000515516 GJE1A6NN92 205 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms