RNA–Protein interactions for RNA: ENST00000515035.5

TCOF1-214, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 2

Gene TCOF1, Length 5,240 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-214ENST00000515035 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.54□□□□□ -0.4
TCOF1-214ENST00000515035 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.54□□□□□ -0.4
TCOF1-214ENST00000515035 FABP7O15540 132 aa12.54□□□□□ -0.4
TCOF1-214ENST00000515035 RAD1O60671 282 aa12.54□□□□□ -0.4
TCOF1-214ENST00000515035 PIM1P11309 404 aaPredicted RBP12.54□□□□□ -0.4
TCOF1-214ENST00000515035 PPP3CBP16298 524 aa12.54□□□□□ -0.4
TCOF1-214ENST00000515035 MAGEB1P43366 347 aa12.54□□□□□ -0.4
TCOF1-214ENST00000515035 GATMP50440 423 aa12.54□□□□□ -0.4
TCOF1-214ENST00000515035 MEF2DQ14814 521 aa12.54□□□□□ -0.4
TCOF1-214ENST00000515035 PGM2L1Q6PCE3 622 aa12.54□□□□□ -0.4
TCOF1-214ENST00000515035 C15orf39Q6ZRI6 1047 aa12.54□□□□□ -0.4
TCOF1-214ENST00000515035 CELF2-AS1Q8N7Q2 184 aa12.54□□□□□ -0.4
TCOF1-214ENST00000515035 RBFOX1Q9NWB1 397 aaKnown RBP12.54□□□□□ -0.4
TCOF1-214ENST00000515035 C5AR2Q9P296 337 aa12.54□□□□□ -0.4
TCOF1-214ENST00000515035 GPR45Q9Y5Y3 372 aa12.54□□□□□ -0.4
TCOF1-214ENST00000515035 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.54□□□□□ -0.4
TCOF1-214ENST00000515035 LEFTY2O00292 366 aa12.54□□□□□ -0.4
TCOF1-214ENST00000515035 TNFSF12O43508 249 aa12.54□□□□□ -0.4
TCOF1-214ENST00000515035 CD79BP40259 229 aa12.54□□□□□ -0.4
TCOF1-214ENST00000515035 STK19P49842 368 aaPredicted RBP12.54□□□□□ -0.4
TCOF1-214ENST00000515035 WDR5P61964 334 aaKnown RBP12.54□□□□□ -0.4
TCOF1-214ENST00000515035 C11orf91Q3C1V1 193 aa12.54□□□□□ -0.4
TCOF1-214ENST00000515035 ZNF805Q5CZA5 627 aa12.54□□□□□ -0.4
TCOF1-214ENST00000515035 SLC9B2Q86UD5 537 aa12.54□□□□□ -0.4
TCOF1-214ENST00000515035 DNAJC22Q8N4W6 341 aa12.54□□□□□ -0.4
TCOF1-214ENST00000515035 PNPLA1Q8N8W4 532 aa12.54□□□□□ -0.4
TCOF1-214ENST00000515035 TSPAN10Q9H1Z9 355 aaPredicted RBP12.54□□□□□ -0.4
TCOF1-214ENST00000515035 C19orf25Q9UFG5 118 aaPredicted RBP12.54□□□□□ -0.4
TCOF1-214ENST00000515035 OR7A17O14581 309 aa12.54□□□□□ -0.4
TCOF1-214ENST00000515035 SEC14L2O76054 403 aa12.54□□□□□ -0.4
TCOF1-214ENST00000515035 SDC1P18827 310 aa12.54□□□□□ -0.4
TCOF1-214ENST00000515035 RRAS2P62070 204 aaPredicted RBP12.54□□□□□ -0.4
TCOF1-214ENST00000515035 HTD2P86397 168 aa12.54□□□□□ -0.4
TCOF1-214ENST00000515035 NADSYN1Q6IA69 706 aa12.54□□□□□ -0.4
TCOF1-214ENST00000515035 APOOLQ6UXV4 268 aa12.54□□□□□ -0.4
TCOF1-214ENST00000515035 SMAP2Q8WU79 429 aaPredicted RBP12.54□□□□□ -0.4
TCOF1-214ENST00000515035 SAP130Q9H0E3 1048 aa12.54□□□□□ -0.4
TCOF1-214ENST00000515035 V9GY05 133 aa12.54□□□□□ -0.4
TCOF1-214ENST00000515035 DVL2O14641 736 aa12.53□□□□□ -0.4
TCOF1-214ENST00000515035 CRTAPO75718 401 aaPredicted RBP12.53□□□□□ -0.4
TCOF1-214ENST00000515035 ATG12O94817 140 aa12.53□□□□□ -0.4
TCOF1-214ENST00000515035 ETV1P50549 477 aa12.53□□□□□ -0.4
TCOF1-214ENST00000515035 PPT1P50897 306 aa12.53□□□□□ -0.4
TCOF1-214ENST00000515035 FAPQ12884 760 aa12.53□□□□□ -0.4
TCOF1-214ENST00000515035 SELPLGQ14242 412 aa12.53□□□□□ -0.4
TCOF1-214ENST00000515035 ZNF169Q14929 603 aaPredicted RBP12.53□□□□□ -0.4
TCOF1-214ENST00000515035 UPP1Q16831 310 aa12.53□□□□□ -0.4
TCOF1-214ENST00000515035 GPRIN1Q7Z2K8 1008 aa12.53□□□□□ -0.4
TCOF1-214ENST00000515035 MAMDC2Q7Z304 686 aaPredicted RBP12.53□□□□□ -0.4
TCOF1-214ENST00000515035 STEAP2Q8NFT2 490 aa12.53□□□□□ -0.4
TCOF1-214ENST00000515035 OR4D6Q8NGJ1 314 aa12.53□□□□□ -0.4
TCOF1-214ENST00000515035 BOCQ9BWV1 1114 aa12.53□□□□□ -0.4
TCOF1-214ENST00000515035 DNTTIP1Q9H147 329 aa12.53□□□□□ -0.4
TCOF1-214ENST00000515035 LUZP4Q9P127 313 aa12.53□□□□□ -0.4
TCOF1-214ENST00000515035 SLC7A7Q9UM01 511 aa12.53□□□□□ -0.4
TCOF1-214ENST00000515035 MEIS3P2A8K0S8 358 aa12.53□□□□□ -0.4
TCOF1-214ENST00000515035 A8MXE2 369 aa12.53□□□□□ -0.4
TCOF1-214ENST00000515035 ATP6V1G2-DDX39BF2Z307 99 aa12.53□□□□□ -0.4
TCOF1-214ENST00000515035 PRICKLE3O43900 615 aaPredicted RBP12.53□□□□□ -0.4
TCOF1-214ENST00000515035 PEX14O75381 377 aa12.53□□□□□ -0.4
TCOF1-214ENST00000515035 MED6O75586 246 aa12.53□□□□□ -0.4
TCOF1-214ENST00000515035 EGFP01133 1207 aa12.53□□□□□ -0.4
TCOF1-214ENST00000515035 FUCA1P04066 466 aa12.53□□□□□ -0.4
TCOF1-214ENST00000515035 RPS17P08708 135 aaKnown RBP12.53□□□□□ -0.4
TCOF1-214ENST00000515035 PRDX3P30048 256 aaKnown RBP12.53□□□□□ -0.4
TCOF1-214ENST00000515035 DBPQ10586 325 aaPredicted RBP12.53□□□□□ -0.4
TCOF1-214ENST00000515035 IL17RDQ8NFM7 739 aa12.53□□□□□ -0.4
TCOF1-214ENST00000515035 OR51T1Q8NGJ9 327 aa12.53□□□□□ -0.4
TCOF1-214ENST00000515035 OR10K1Q8NGX5 313 aa12.53□□□□□ -0.4
TCOF1-214ENST00000515035 SFXN5Q8TD22 340 aa12.53□□□□□ -0.4
TCOF1-214ENST00000515035 HAVCR2Q8TDQ0 301 aa12.53□□□□□ -0.4
TCOF1-214ENST00000515035 UQCC2Q9BRT2 126 aa12.53□□□□□ -0.4
TCOF1-214ENST00000515035 ACTRT3Q9BYD9 372 aa12.53□□□□□ -0.4
TCOF1-214ENST00000515035 ABRACLQ9P1F3 81 aa12.53□□□□□ -0.4
TCOF1-214ENST00000515035 SERTAD3Q9UJW9 196 aa12.53□□□□□ -0.4
TCOF1-214ENST00000515035 PCDHA9Q9Y5H5 950 aa12.53□□□□□ -0.4
TCOF1-214ENST00000515035 DOT1LQ8TEK3 1739 aa12.53□□□□□ -0.4
TCOF1-214ENST00000515035 COCHO43405 550 aa12.53□□□□□ -0.4
TCOF1-214ENST00000515035 FBXO24O75426 580 aa12.53□□□□□ -0.4
TCOF1-214ENST00000515035 HLA-AP01891 365 aaKnown RBP12.53□□□□□ -0.4
TCOF1-214ENST00000515035 SERPINA7P05543 415 aa12.53□□□□□ -0.4
TCOF1-214ENST00000515035 HLA-DMAP28067 261 aa12.53□□□□□ -0.4
TCOF1-214ENST00000515035 CD68P34810 354 aaPredicted RBP12.53□□□□□ -0.4
TCOF1-214ENST00000515035 FASLGP48023 281 aa12.53□□□□□ -0.4
TCOF1-214ENST00000515035 VEGFCP49767 419 aa12.53□□□□□ -0.4
TCOF1-214ENST00000515035 SIM1P81133 766 aaPredicted RBP12.53□□□□□ -0.4
TCOF1-214ENST00000515035 CDK3Q00526 305 aa12.53□□□□□ -0.4
TCOF1-214ENST00000515035 TAGLNQ01995 201 aaKnown RBP12.53□□□□□ -0.4
TCOF1-214ENST00000515035 P2RY14Q15391 338 aa12.53□□□□□ -0.4
TCOF1-214ENST00000515035 HIST2H3PS2Q5TEC6 136 aa12.53□□□□□ -0.4
TCOF1-214ENST00000515035 LAX1Q8IWV1 398 aa12.53□□□□□ -0.4
TCOF1-214ENST00000515035 BBS1Q8NFJ9 593 aa12.53□□□□□ -0.4
TCOF1-214ENST00000515035 HAS2Q92819 552 aa12.53□□□□□ -0.4
TCOF1-214ENST00000515035 C3orf30Q96M34 536 aa12.53□□□□□ -0.4
TCOF1-214ENST00000515035 SLC38A1Q9H2H9 487 aa12.53□□□□□ -0.4
TCOF1-214ENST00000515035 GJB5O95377 273 aa12.53□□□□□ -0.4
TCOF1-214ENST00000515035 SERPINA5P05154 406 aa12.53□□□□□ -0.4
TCOF1-214ENST00000515035 GNB3P16520 340 aa12.53□□□□□ -0.4
TCOF1-214ENST00000515035 PSMB10P40306 273 aa12.53□□□□□ -0.4
TCOF1-214ENST00000515035 ARRB1P49407 418 aaPredicted RBP12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms