RNA–Protein interactions for RNA: ENST00000514267.1

CALCOCO2-223, Transcript of calcium binding and coiled-coil domain 2, human

TSL 2

Gene CALCOCO2, Length 336 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CALCOCO2-223	ENST00000514267	OPRPN	Q99935	248 aa	Predicted RBP	2.82	□□□□□ -1.96
CALCOCO2-223	ENST00000514267	HSD17B14	Q9BPX1	270 aa		2.82	□□□□□ -1.96
CALCOCO2-223	ENST00000514267	SLC25A51	Q9H1U9	297 aa		2.82	□□□□□ -1.96
CALCOCO2-223	ENST00000514267	GPN2	Q9H9Y4	310 aa	Predicted RBP	2.82	□□□□□ -1.96
CALCOCO2-223	ENST00000514267	MRPL39	Q9NYK5	338 aa	Known RBP	2.82	□□□□□ -1.96
CALCOCO2-223	ENST00000514267	NAP1L2	Q9ULW6	460 aa	Predicted RBP	2.82	□□□□□ -1.96
CALCOCO2-223	ENST00000514267	SPATA2	Q9UM82	520 aa		2.82	□□□□□ -1.96
CALCOCO2-223	ENST00000514267	EXOG	Q9Y2C4	368 aa	Known RBP	2.82	□□□□□ -1.96
CALCOCO2-223	ENST00000514267	MRPS28	Q9Y2Q9	187 aa	Known RBP	2.82	□□□□□ -1.96
CALCOCO2-223	ENST00000514267	MAP3K19	Q56UN5	1328 aa		2.82	□□□□□ -1.96
CALCOCO2-223	ENST00000514267	SBNO1	A3KN83	1393 aa		2.82	□□□□□ -1.96
CALCOCO2-223	ENST00000514267	ARHGEF10	O15013	1369 aa		2.82	□□□□□ -1.96
CALCOCO2-223	ENST00000514267	PIK3R4	Q99570	1358 aa		2.82	□□□□□ -1.96
CALCOCO2-223	ENST00000514267	USP6	P35125	1406 aa		2.82	□□□□□ -1.96
CALCOCO2-223	ENST00000514267	ADAMTS13	Q76LX8	1427 aa		2.82	□□□□□ -1.96
CALCOCO2-223	ENST00000514267	ATP10D	Q9P241	1426 aa		2.82	□□□□□ -1.96
CALCOCO2-223	ENST00000514267	SETD1A	O15047	1707 aa	Known RBP	2.82	□□□□□ -1.96
CALCOCO2-223	ENST00000514267	MON2	Q7Z3U7	1717 aa		2.82	□□□□□ -1.96
CALCOCO2-223	ENST00000514267	SIPA1L2	Q9P2F8	1722 aa	Predicted RBP	2.82	□□□□□ -1.96
CALCOCO2-223	ENST00000514267	AKAP12	Q02952	1782 aa		2.82	□□□□□ -1.96
CALCOCO2-223	ENST00000514267		A0A0U1RQS6	177 aa		2.81	□□□□□ -1.96
CALCOCO2-223	ENST00000514267	PCP4L1	A6NKN8	68 aa		2.81	□□□□□ -1.96
CALCOCO2-223	ENST00000514267	ANKHD1-EIF4EBP3	H7C0V5	636 aa	Predicted RBP	2.81	□□□□□ -1.96
CALCOCO2-223	ENST00000514267		K7EQG2	157 aa		2.81	□□□□□ -1.96
CALCOCO2-223	ENST00000514267	TYROBP	O43914	113 aa		2.81	□□□□□ -1.96
CALCOCO2-223	ENST00000514267	TPST2	O60704	377 aa		2.81	□□□□□ -1.96
CALCOCO2-223	ENST00000514267	TSC22D2	O75157	780 aa		2.81	□□□□□ -1.96
CALCOCO2-223	ENST00000514267	SNN	O75324	88 aa	Predicted RBP	2.81	□□□□□ -1.96
CALCOCO2-223	ENST00000514267	STX11	O75558	287 aa		2.81	□□□□□ -1.96
CALCOCO2-223	ENST00000514267	CAPN1	P07384	714 aa		2.81	□□□□□ -1.96
CALCOCO2-223	ENST00000514267	DBT	P11182	482 aa	Known RBP	2.81	□□□□□ -1.96
CALCOCO2-223	ENST00000514267	ANXA3	P12429	323 aa		2.81	□□□□□ -1.96
CALCOCO2-223	ENST00000514267	TPSB2	P20231	275 aa		2.81	□□□□□ -1.96
CALCOCO2-223	ENST00000514267	HNF1A	P20823	631 aa		2.81	□□□□□ -1.96
CALCOCO2-223	ENST00000514267	DHPS	P49366	369 aa	Predicted RBP	2.81	□□□□□ -1.96
CALCOCO2-223	ENST00000514267	TAF6	P49848	677 aa		2.81	□□□□□ -1.96
CALCOCO2-223	ENST00000514267	RIDA	P52758	137 aa	Known RBP	2.81	□□□□□ -1.96
CALCOCO2-223	ENST00000514267	PLA2G16	P53816	162 aa		2.81	□□□□□ -1.96
CALCOCO2-223	ENST00000514267	RAG2	P55895	527 aa		2.81	□□□□□ -1.96
CALCOCO2-223	ENST00000514267	HAND2	P61296	217 aa		2.81	□□□□□ -1.96
CALCOCO2-223	ENST00000514267	NCBP1	Q09161	790 aa	Known RBP	2.81	□□□□□ -1.96
CALCOCO2-223	ENST00000514267	PJVK	Q0ZLH3	352 aa		2.81	□□□□□ -1.96
CALCOCO2-223	ENST00000514267	DDX39B	Q13838	428 aa	Known RBP	2.81	□□□□□ -1.96
CALCOCO2-223	ENST00000514267	TMEM187	Q14656	261 aa		2.81	□□□□□ -1.96
CALCOCO2-223	ENST00000514267	ATXN7L3	Q14CW9	347 aa	Predicted RBP	2.81	□□□□□ -1.96
CALCOCO2-223	ENST00000514267	ZNF146	Q15072	292 aa		2.81	□□□□□ -1.96
CALCOCO2-223	ENST00000514267	ZMYND11	Q15326	602 aa		2.81	□□□□□ -1.96
CALCOCO2-223	ENST00000514267	TPSAB1	Q15661	275 aa		2.81	□□□□□ -1.96
CALCOCO2-223	ENST00000514267	ZFP69	Q49AA0	526 aa		2.81	□□□□□ -1.96
CALCOCO2-223	ENST00000514267	CELF3	Q5SZQ8	465 aa	Known RBP	2.81	□□□□□ -1.96
CALCOCO2-223	ENST00000514267	CCDC183	Q5T5S1	534 aa		2.81	□□□□□ -1.96
CALCOCO2-223	ENST00000514267	PYHIN1	Q6K0P9	492 aa		2.81	□□□□□ -1.96
CALCOCO2-223	ENST00000514267	PRR5L	Q6MZQ0	368 aa		2.81	□□□□□ -1.96
CALCOCO2-223	ENST00000514267	TMEM17	Q86X19	198 aa		2.81	□□□□□ -1.96
CALCOCO2-223	ENST00000514267	RNF130	Q86XS8	419 aa		2.81	□□□□□ -1.96
CALCOCO2-223	ENST00000514267	CCDC71	Q8IV32	467 aa	Predicted RBP	2.81	□□□□□ -1.96
CALCOCO2-223	ENST00000514267	PHC2	Q8IXK0	858 aa		2.81	□□□□□ -1.96
CALCOCO2-223	ENST00000514267	SPEM1	Q8N4L4	309 aa		2.81	□□□□□ -1.96
CALCOCO2-223	ENST00000514267	CLDN19	Q8N6F1	224 aa		2.81	□□□□□ -1.96
CALCOCO2-223	ENST00000514267	ZNRF1	Q8ND25	227 aa		2.81	□□□□□ -1.96
CALCOCO2-223	ENST00000514267	BHLHE23	Q8NDY6	225 aa		2.81	□□□□□ -1.96
CALCOCO2-223	ENST00000514267	OR52J3	Q8NH60	311 aa		2.81	□□□□□ -1.96
CALCOCO2-223	ENST00000514267	CTNNBL1	Q8WYA6	563 aa	Predicted RBP	2.81	□□□□□ -1.96
CALCOCO2-223	ENST00000514267	TAF15	Q92804	592 aa	Known RBP eCLIP	2.81	□□□□□ -1.96
CALCOCO2-223	ENST00000514267	COQ2	Q96H96	371 aa		2.81	□□□□□ -1.96
CALCOCO2-223	ENST00000514267	CNDP1	Q96KN2	507 aa		2.81	□□□□□ -1.96
CALCOCO2-223	ENST00000514267	C7orf34	Q96L11	122 aa		2.81	□□□□□ -1.96
CALCOCO2-223	ENST00000514267	SLC39A3	Q9BRY0	314 aa		2.81	□□□□□ -1.96
CALCOCO2-223	ENST00000514267	NFKBIZ	Q9BYH8	718 aa		2.81	□□□□□ -1.96
CALCOCO2-223	ENST00000514267	CRNKL1	Q9BZJ0	848 aa	Known RBP	2.81	□□□□□ -1.96
CALCOCO2-223	ENST00000514267	MEAF6	Q9HAF1	191 aa		2.81	□□□□□ -1.96
CALCOCO2-223	ENST00000514267	RBM28	Q9NW13	759 aa	Known RBP	2.81	□□□□□ -1.96
CALCOCO2-223	ENST00000514267	CHMP5	Q9NZZ3	219 aa		2.81	□□□□□ -1.96
CALCOCO2-223	ENST00000514267	MGAT4A	Q9UM21	535 aa		2.81	□□□□□ -1.96
CALCOCO2-223	ENST00000514267	RPH3AL	Q9UNE2	315 aa		2.81	□□□□□ -1.96
CALCOCO2-223	ENST00000514267	GMPPB	Q9Y5P6	360 aa		2.81	□□□□□ -1.96
CALCOCO2-223	ENST00000514267	AUP1	Q9Y679	476 aa		2.81	□□□□□ -1.96
CALCOCO2-223	ENST00000514267	KIF24	Q5T7B8	1368 aa		2.81	□□□□□ -1.96
CALCOCO2-223	ENST00000514267	KIAA0232	Q92628	1395 aa		2.81	□□□□□ -1.96
CALCOCO2-223	ENST00000514267	DIP2A	Q14689	1571 aa		2.81	□□□□□ -1.96
CALCOCO2-223	ENST00000514267	C3	P01024	1663 aa		2.81	□□□□□ -1.96
CALCOCO2-223	ENST00000514267	VIRMA	Q69YN4	1812 aa	Known RBP	2.8	□□□□□ -1.96
CALCOCO2-223	ENST00000514267	OVOS2	A0A0J9YW53	1432 aa		2.8	□□□□□ -1.96
CALCOCO2-223	ENST00000514267	OVOS2	Q6IE36	1432 aa		2.8	□□□□□ -1.96
CALCOCO2-223	ENST00000514267	ANKAR	Q7Z5J8	1434 aa		2.8	□□□□□ -1.96
CALCOCO2-223	ENST00000514267	MAP3K5	Q99683	1374 aa		2.8	□□□□□ -1.96
CALCOCO2-223	ENST00000514267	IGLV7-46	A0A075B6I9	117 aa		2.8	□□□□□ -1.96
CALCOCO2-223	ENST00000514267	TRGV8	A0A0C4DH27	118 aa		2.8	□□□□□ -1.96
CALCOCO2-223	ENST00000514267	FAM240B	A0A1B0GVZ2	78 aa		2.8	□□□□□ -1.96
CALCOCO2-223	ENST00000514267	ESYT2	A0FGR8	921 aa		2.8	□□□□□ -1.96
CALCOCO2-223	ENST00000514267	XKRY2	A2RUG3	117 aa		2.8	□□□□□ -1.96
CALCOCO2-223	ENST00000514267	MFSD2B	A6NFX1	497 aa		2.8	□□□□□ -1.96
CALCOCO2-223	ENST00000514267	ZSCAN5C	A6NGD5	496 aa	Predicted RBP	2.8	□□□□□ -1.96
CALCOCO2-223	ENST00000514267	NPIPA7	E9PJI5	369 aa		2.8	□□□□□ -1.96
CALCOCO2-223	ENST00000514267	BTN3A3	O00478	584 aa		2.8	□□□□□ -1.96
CALCOCO2-223	ENST00000514267	ARPC3	O15145	178 aa		2.8	□□□□□ -1.96
CALCOCO2-223	ENST00000514267	ZNF749	O43361	778 aa		2.8	□□□□□ -1.96
CALCOCO2-223	ENST00000514267	DCX	O43602	365 aa		2.8	□□□□□ -1.96
CALCOCO2-223	ENST00000514267	SNAP91	O60641	907 aa		2.8	□□□□□ -1.96
CALCOCO2-223	ENST00000514267	SCGN	O76038	276 aa		2.8	□□□□□ -1.96

Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms