RNA–Protein interactions for RNA: ENST00000514093.5

SQSTM1-215, Transcript of sequestosome 1, humanhuman

TSL 5

Gene SQSTM1, Length 842 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-215ENST00000514093 DDX18Q9NVP1 670 aaKnown RBP18.01■□□□□ 0.47
SQSTM1-215ENST00000514093 KLHL13Q9P2N7 655 aa18.01■□□□□ 0.47
SQSTM1-215ENST00000514093 TMCO1Q9UM00 188 aa18.01■□□□□ 0.47
SQSTM1-215ENST00000514093 SAR1BQ9Y6B6 198 aa18.01■□□□□ 0.47
SQSTM1-215ENST00000514093 ZSCAN12O43309 604 aa18■□□□□ 0.47
SQSTM1-215ENST00000514093 RAD51CO43502 376 aa18■□□□□ 0.47
SQSTM1-215ENST00000514093 DLX3O60479 287 aa18■□□□□ 0.47
SQSTM1-215ENST00000514093 PSMG1O95456 288 aa18■□□□□ 0.47
SQSTM1-215ENST00000514093 ME2P23368 584 aa18■□□□□ 0.47
SQSTM1-215ENST00000514093 IGFBP5P24593 272 aa18■□□□□ 0.47
SQSTM1-215ENST00000514093 THBS2P35442 1172 aa18■□□□□ 0.47
SQSTM1-215ENST00000514093 DSCR9P59020 149 aa18■□□□□ 0.47
SQSTM1-215ENST00000514093 SLC18A2Q05940 514 aa18■□□□□ 0.47
SQSTM1-215ENST00000514093 RUNX1T1Q06455 604 aa18■□□□□ 0.47
SQSTM1-215ENST00000514093 C2orf80Q0P641 193 aa18■□□□□ 0.47
SQSTM1-215ENST00000514093 PPA1Q15181 289 aa18■□□□□ 0.47
SQSTM1-215ENST00000514093 OR4C3Q8NH37 302 aa18■□□□□ 0.47
SQSTM1-215ENST00000514093 OR2W6PQ8NHA6 318 aa18■□□□□ 0.47
SQSTM1-215ENST00000514093 LMF2Q9BU23 707 aaKnown RBP18■□□□□ 0.47
SQSTM1-215ENST00000514093 GLIPR2Q9H4G4 154 aa18■□□□□ 0.47
SQSTM1-215ENST00000514093 CHODLQ9H9P2 273 aa18■□□□□ 0.47
SQSTM1-215ENST00000514093 NPAP1Q9NZP6 1156 aa18■□□□□ 0.47
SQSTM1-215ENST00000514093 PRSS50Q9UI38 385 aa18■□□□□ 0.47
SQSTM1-215ENST00000514093 FAM187AA6NFU0 413 aa17.99■□□□□ 0.47
SQSTM1-215ENST00000514093 KCNH1O95259 989 aa17.99■□□□□ 0.47
SQSTM1-215ENST00000514093 OXSR1O95747 527 aaPredicted RBP17.99■□□□□ 0.47
SQSTM1-215ENST00000514093 KRT6AP02538 564 aa17.99■□□□□ 0.47
SQSTM1-215ENST00000514093 KRT6BP04259 564 aa17.99■□□□□ 0.47
SQSTM1-215ENST00000514093 PABPC4LP0CB38 370 aaKnown RBP17.99■□□□□ 0.47
SQSTM1-215ENST00000514093 TIA1P31483 386 aaKnown RBP eCLIP17.99■□□□□ 0.472e-7■■□□□ 14.2
SQSTM1-215ENST00000514093 HSD17B3P37058 310 aa17.99■□□□□ 0.47
SQSTM1-215ENST00000514093 KRT6CP48668 564 aa17.99■□□□□ 0.47
SQSTM1-215ENST00000514093 HTR6P50406 440 aa17.99■□□□□ 0.47
SQSTM1-215ENST00000514093 ZNF41P51814 821 aaPredicted RBP17.99■□□□□ 0.47
SQSTM1-215ENST00000514093 ACSM2AQ08AH3 577 aa17.99■□□□□ 0.47
SQSTM1-215ENST00000514093 P2RY6Q15077 328 aa17.99■□□□□ 0.47
SQSTM1-215ENST00000514093 RAB35Q15286 201 aa17.99■□□□□ 0.47
SQSTM1-215ENST00000514093 ACSM2BQ68CK6 577 aa17.99■□□□□ 0.47
SQSTM1-215ENST00000514093 C11orf71Q6IPW1 123 aa17.99■□□□□ 0.47
SQSTM1-215ENST00000514093 PIAS4Q8N2W9 510 aaPredicted RBP17.99■□□□□ 0.47
SQSTM1-215ENST00000514093 OR2L13Q8N349 312 aa17.99■□□□□ 0.47
SQSTM1-215ENST00000514093 FBXO25Q8TCJ0 367 aa17.99■□□□□ 0.47
SQSTM1-215ENST00000514093 FAM168AQ92567 244 aa17.99■□□□□ 0.47
SQSTM1-215ENST00000514093 ELP4Q96EB1 424 aa17.99■□□□□ 0.47
SQSTM1-215ENST00000514093 EQTNQ9NQ60 294 aa17.99■□□□□ 0.47
SQSTM1-215ENST00000514093 C7orf72A4D263 438 aa17.98■□□□□ 0.47
SQSTM1-215ENST00000514093 SLC35F4A4IF30 521 aa17.98■□□□□ 0.47
SQSTM1-215ENST00000514093 ALG1L2C9J202 215 aa17.98■□□□□ 0.47
SQSTM1-215ENST00000514093 E7EQL1 145 aa17.98■□□□□ 0.47
SQSTM1-215ENST00000514093 YES1P07947 543 aa17.98■□□□□ 0.47
SQSTM1-215ENST00000514093 ANXA4P09525 319 aaPredicted RBP17.98■□□□□ 0.47
SQSTM1-215ENST00000514093 PYGBP11216 843 aa17.98■□□□□ 0.47
SQSTM1-215ENST00000514093 HSD3B1P14060 373 aa17.98■□□□□ 0.47
SQSTM1-215ENST00000514093 SLC25A16P16260 332 aa17.98■□□□□ 0.47
SQSTM1-215ENST00000514093 DDCP20711 480 aa17.98■□□□□ 0.47
SQSTM1-215ENST00000514093 HSD3B2P26439 372 aa17.98■□□□□ 0.47
SQSTM1-215ENST00000514093 TTKP33981 857 aa17.98■□□□□ 0.47
SQSTM1-215ENST00000514093 GUCY2DQ02846 1103 aa17.98■□□□□ 0.47
SQSTM1-215ENST00000514093 CLCQ05315 142 aa17.98■□□□□ 0.47
SQSTM1-215ENST00000514093 RNPS1Q15287 305 aaKnown RBP17.98■□□□□ 0.47
SQSTM1-215ENST00000514093 ZAR1Q86SH2 424 aa17.98■□□□□ 0.47
SQSTM1-215ENST00000514093 GPR151Q8TDV0 419 aa17.98■□□□□ 0.47
SQSTM1-215ENST00000514093 C3orf14Q9HBI5 128 aa17.98■□□□□ 0.47
SQSTM1-215ENST00000514093 IGHV3-15A0A0B4J1V0 119 aa17.97■□□□□ 0.47
SQSTM1-215ENST00000514093 A8MT66 165 aa17.97■□□□□ 0.47
SQSTM1-215ENST00000514093 C9JVG2 144 aa17.97■□□□□ 0.47
SQSTM1-215ENST00000514093 EFNA2O43921 213 aa17.97■□□□□ 0.47
SQSTM1-215ENST00000514093 ULK1O75385 1050 aa17.97■□□□□ 0.47
SQSTM1-215ENST00000514093 PRKD3O94806 890 aa17.97■□□□□ 0.47
SQSTM1-215ENST00000514093 EDNRAP25101 427 aa17.97■□□□□ 0.47
SQSTM1-215ENST00000514093 SPIN4Q56A73 249 aa17.97■□□□□ 0.47
SQSTM1-215ENST00000514093 FAM120AOSQ5T036 256 aa17.97■□□□□ 0.47
SQSTM1-215ENST00000514093 UBAP2Q5T6F2 1119 aaKnown RBP17.97■□□□□ 0.47
SQSTM1-215ENST00000514093 FCRLAQ7L513 359 aa17.97■□□□□ 0.47
SQSTM1-215ENST00000514093 TRABD2AQ86V40 505 aa17.97■□□□□ 0.47
SQSTM1-215ENST00000514093 METTL6Q8TCB7 284 aa17.97■□□□□ 0.47
SQSTM1-215ENST00000514093 C10orf105Q8TEF2 133 aa17.97■□□□□ 0.47
SQSTM1-215ENST00000514093 ZNF775Q96BV0 537 aaPredicted RBP17.97■□□□□ 0.47
SQSTM1-215ENST00000514093 AMDHD1Q96NU7 426 aa17.97■□□□□ 0.47
SQSTM1-215ENST00000514093 USB1Q9BQ65 265 aaKnown RBP17.97■□□□□ 0.47
SQSTM1-215ENST00000514093 CBLN4Q9NTU7 201 aa17.97■□□□□ 0.47
SQSTM1-215ENST00000514093 MALRD1Q5VYJ5 2156 aa17.97■□□□□ 0.47
SQSTM1-215ENST00000514093 LY6HO94772 140 aa17.96■□□□□ 0.47
SQSTM1-215ENST00000514093 SBK3P0C264 359 aa17.96■□□□□ 0.47
SQSTM1-215ENST00000514093 ENPP1P22413 925 aa17.96■□□□□ 0.47
SQSTM1-215ENST00000514093 USF1P22415 310 aaPredicted RBP17.96■□□□□ 0.47
SQSTM1-215ENST00000514093 MANFP55145 182 aaKnown RBP17.96■□□□□ 0.47
SQSTM1-215ENST00000514093 GNG11P61952 73 aa17.96■□□□□ 0.47
SQSTM1-215ENST00000514093 LSM11P83369 360 aaKnown RBP eCLIP17.96■□□□□ 0.472e-6■■□□□ 13.3
SQSTM1-215ENST00000514093 SPOCK1Q08629 439 aa17.96■□□□□ 0.47
SQSTM1-215ENST00000514093 FOXF1Q12946 379 aa17.96■□□□□ 0.47
SQSTM1-215ENST00000514093 SLC29A2Q14542 456 aa17.96■□□□□ 0.47
SQSTM1-215ENST00000514093 GLE1Q53GS7 698 aaKnown RBP17.96■□□□□ 0.47
SQSTM1-215ENST00000514093 ZDHHC24Q6UX98 284 aa17.96■□□□□ 0.47
SQSTM1-215ENST00000514093 Q6ZSR9 355 aa17.96■□□□□ 0.47
SQSTM1-215ENST00000514093 Q6ZT83 130 aa17.96■□□□□ 0.47
SQSTM1-215ENST00000514093 TDRPQ86YL5 185 aa17.96■□□□□ 0.47
SQSTM1-215ENST00000514093 ATP6V1C2Q8NEY4 427 aa17.96■□□□□ 0.47
SQSTM1-215ENST00000514093 FBXO30Q8TB52 745 aa17.96■□□□□ 0.47
SQSTM1-215ENST00000514093 ACTRT2Q8TDY3 377 aa17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms